RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 MAP3K4Q9Y6R4 1608 aa-1.17□□□□□ -2.6
CDR1-202ENST00000625883 NDUFB1O75438 58 aa-1.17□□□□□ -2.6
CDR1-202ENST00000625883 MT1GP13640 62 aa-1.17□□□□□ -2.6
CDR1-202ENST00000625883 S4R3F8 94 aa-1.17□□□□□ -2.6
CDR1-202ENST00000625883 ATMQ13315 3056 aa-1.17□□□□□ -2.6
CDR1-202ENST00000625883 DIP2BQ9P265 1576 aa-1.17□□□□□ -2.6
CDR1-202ENST00000625883 URB2Q14146 1524 aaKnown RBP-1.17□□□□□ -2.6
CDR1-202ENST00000625883 PPLO60437 1756 aa-1.17□□□□□ -2.6
CDR1-202ENST00000625883 ACYP1P07311 99 aa-1.18□□□□□ -2.6
CDR1-202ENST00000625883 Q9H521 79 aa-1.18□□□□□ -2.6
CDR1-202ENST00000625883 CCNB3Q8WWL7 1395 aa-1.18□□□□□ -2.6
CDR1-202ENST00000625883 PIK3C2BO00750 1634 aa-1.18□□□□□ -2.6
CDR1-202ENST00000625883 LCE6AA0A183 80 aa-1.18□□□□□ -2.6
CDR1-202ENST00000625883 DDX60LQ5H9U9 1706 aaKnown RBP-1.19□□□□□ -2.6
CDR1-202ENST00000625883 TTC37Q6PGP7 1564 aa-1.19□□□□□ -2.6
CDR1-202ENST00000625883 MT1EP04732 61 aa-1.2□□□□□ -2.6
CDR1-202ENST00000625883 PRLHP81277 87 aa-1.2□□□□□ -2.6
CDR1-202ENST00000625883 V9GYS6 101 aa-1.2□□□□□ -2.6
CDR1-202ENST00000625883 DEFB110Q30KQ9 67 aa-1.21□□□□□ -2.6
CDR1-202ENST00000625883 MT1LQ93083 61 aa-1.21□□□□□ -2.6
CDR1-202ENST00000625883 PLCH1Q4KWH8 1693 aa-1.21□□□□□ -2.6
CDR1-202ENST00000625883 ZFHX4Q86UP3 3567 aa-1.22□□□□□ -2.6
CDR1-202ENST00000625883 DNAH10Q8IVF4 4471 aa-1.22□□□□□ -2.61
CDR1-202ENST00000625883 BPTFQ12830 3046 aa-1.22□□□□□ -2.61
CDR1-202ENST00000625883 PRUNE2Q8WUY3 3088 aa-1.23□□□□□ -2.61
CDR1-202ENST00000625883 SMR3BP02814 79 aaPredicted RBP-1.23□□□□□ -2.61
CDR1-202ENST00000625883 DEFB130BP0DP73 79 aa-1.23□□□□□ -2.61
CDR1-202ENST00000625883 DEFB130AP0DP74 79 aa-1.23□□□□□ -2.61
CDR1-202ENST00000625883 PVALEFA0A1B0GWK0 134 aa-1.24□□□□□ -2.61
CDR1-202ENST00000625883 UMAD1C9J7I0 102 aa-1.24□□□□□ -2.61
CDR1-202ENST00000625883 LYNX1G3V0Z9 82 aa-1.24□□□□□ -2.61
CDR1-202ENST00000625883 IFI27P40305 119 aaPredicted RBP-1.24□□□□□ -2.61
CDR1-202ENST00000625883 CENPEQ02224 2701 aa-1.24□□□□□ -2.61
CDR1-202ENST00000625883 IFI6P09912 130 aa-1.24□□□□□ -2.61
CDR1-202ENST00000625883 CCDC88BA6NC98 1476 aa-1.25□□□□□ -2.61
CDR1-202ENST00000625883 NDUFA4O00483 81 aa-1.25□□□□□ -2.61
CDR1-202ENST00000625883 IAPPP10997 89 aa-1.25□□□□□ -2.61
CDR1-202ENST00000625883 CFAP43Q8NDM7 1665 aa-1.26□□□□□ -2.61
CDR1-202ENST00000625883 TDRG1Q3Y452 100 aa-1.26□□□□□ -2.61
CDR1-202ENST00000625883 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.26□□□□□ -2.61
CDR1-202ENST00000625883 RICTORQ6R327 1708 aa-1.27□□□□□ -2.61
CDR1-202ENST00000625883 CDC42BPGQ6DT37 1551 aa-1.27□□□□□ -2.61
CDR1-202ENST00000625883 KRTAP8-1Q8IUC2 63 aa-1.27□□□□□ -2.61
CDR1-202ENST00000625883 ITSN1Q15811 1721 aa-1.27□□□□□ -2.61
CDR1-202ENST00000625883 FREM2Q5SZK8 3169 aa-1.27□□□□□ -2.61
CDR1-202ENST00000625883 NREPQ16612 68 aa-1.28□□□□□ -2.61
CDR1-202ENST00000625883 DEFB106AQ8N104 65 aa-1.28□□□□□ -2.61
CDR1-202ENST00000625883 CSMD2Q7Z408 3487 aa-1.29□□□□□ -2.62
CDR1-202ENST00000625883 MT1FP04733 61 aa-1.29□□□□□ -2.62
CDR1-202ENST00000625883 ANKRD36CQ5JPF3 1778 aa-1.3□□□□□ -2.62
CDR1-202ENST00000625883 KANTRA0A1W2PQU2 76 aa-1.31□□□□□ -2.62
CDR1-202ENST00000625883 ATP5EP2Q5VTU8 51 aa-1.31□□□□□ -2.62
CDR1-202ENST00000625883 UACAQ9BZF9 1416 aa-1.31□□□□□ -2.62
CDR1-202ENST00000625883 TJP1Q07157 1748 aa-1.32□□□□□ -2.62
CDR1-202ENST00000625883 ZC3H13Q5T200 1668 aaKnown RBP-1.32□□□□□ -2.62
CDR1-202ENST00000625883 CDC42BPAQ5VT25 1732 aa-1.32□□□□□ -2.62
CDR1-202ENST00000625883 SPEGQ15772 3267 aa-1.34□□□□□ -2.62
CDR1-202ENST00000625883 DMDP11532 3685 aa-1.34□□□□□ -2.62
CDR1-202ENST00000625883 THOC2Q8NI27 1593 aaKnown RBP-1.34□□□□□ -2.62
CDR1-202ENST00000625883 CLPSL2Q6UWE3 100 aa-1.35□□□□□ -2.63
CDR1-202ENST00000625883 MGAQ8IWI9 3026 aa-1.36□□□□□ -2.63
CDR1-202ENST00000625883 RNF17Q9BXT8 1623 aaKnown RBP-1.36□□□□□ -2.63
CDR1-202ENST00000625883 A0A087WXM4 84 aa-1.36□□□□□ -2.63
CDR1-202ENST00000625883 DEFB131BA0A096LNP1 70 aa-1.36□□□□□ -2.63
CDR1-202ENST00000625883 SMIM13P0DJ93 91 aa-1.36□□□□□ -2.63
CDR1-202ENST00000625883 PARP4Q9UKK3 1724 aaKnown RBP-1.36□□□□□ -2.63
CDR1-202ENST00000625883 DEFB4AO15263 64 aa-1.37□□□□□ -2.63
CDR1-202ENST00000625883 DEFB121Q5J5C9 76 aa-1.37□□□□□ -2.63
CDR1-202ENST00000625883 KDM5DQ9BY66 1539 aa-1.37□□□□□ -2.63
CDR1-202ENST00000625883 TOGARAM1Q9Y4F4 1720 aa-1.37□□□□□ -2.63
CDR1-202ENST00000625883 ITSN2Q9NZM3 1697 aa-1.37□□□□□ -2.63
CDR1-202ENST00000625883 CRYBG3Q68DQ2 2970 aa-1.37□□□□□ -2.63
CDR1-202ENST00000625883 KIAA0586Q9BVV6 1533 aa-1.38□□□□□ -2.63
CDR1-202ENST00000625883 HMGA1P17096 107 aaKnown RBP-1.38□□□□□ -2.63
CDR1-202ENST00000625883 RPS29P62273 56 aaKnown RBP-1.38□□□□□ -2.63
CDR1-202ENST00000625883 ST20Q9HBF5 79 aa-1.38□□□□□ -2.63
CDR1-202ENST00000625883 CEP350Q5VT06 3117 aa-1.39□□□□□ -2.63
CDR1-202ENST00000625883 ARHGAP35Q9NRY4 1499 aa-1.4□□□□□ -2.63
CDR1-202ENST00000625883 TNP1P09430 55 aa-1.4□□□□□ -2.63
CDR1-202ENST00000625883 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.4□□□□□ -2.63
CDR1-202ENST00000625883 HFM1A2PYH4 1435 aa-1.41□□□□□ -2.63
CDR1-202ENST00000625883 DCAF1Q9Y4B6 1507 aa-1.42□□□□□ -2.64
CDR1-202ENST00000625883 IGLV5-48A0A075B6I7 105 aa-1.42□□□□□ -2.64
CDR1-202ENST00000625883 MMP24-AS1A0A0U1RRL7 71 aa-1.42□□□□□ -2.64
CDR1-202ENST00000625883 H3BUT2 72 aa-1.42□□□□□ -2.64
CDR1-202ENST00000625883 MRPL33O75394 65 aaKnown RBP-1.42□□□□□ -2.64
CDR1-202ENST00000625883 ADIRFQ15847 76 aa-1.42□□□□□ -2.64
CDR1-202ENST00000625883 KCNQ1DNQ9H478 68 aa-1.42□□□□□ -2.64
CDR1-202ENST00000625883 NRAPQ86VF7 1730 aa-1.42□□□□□ -2.64
CDR1-202ENST00000625883 CEP250Q9BV73 2442 aa-1.42□□□□□ -2.64
CDR1-202ENST00000625883 LY75O60449 1722 aa-1.42□□□□□ -2.64
CDR1-202ENST00000625883 CRIP1P50238 77 aa-1.43□□□□□ -2.64
CDR1-202ENST00000625883 WDFY4Q6ZS81 3184 aa-1.43□□□□□ -2.64
CDR1-202ENST00000625883 KIF1AQ12756 1690 aa-1.43□□□□□ -2.64
CDR1-202ENST00000625883 RALGAPBQ86X10 1494 aa-1.43□□□□□ -2.64
CDR1-202ENST00000625883 DCHS1Q96JQ0 3298 aa-1.44□□□□□ -2.64
CDR1-202ENST00000625883 CD163L1Q9NR16 1453 aa-1.44□□□□□ -2.64
CDR1-202ENST00000625883 UBL5Q9BZL1 73 aa-1.44□□□□□ -2.64
CDR1-202ENST00000625883 WDFY3Q8IZQ1 3526 aa-1.44□□□□□ -2.64
CDR1-202ENST00000625883 INO80Q9ULG1 1556 aaPredicted RBP-1.45□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms