RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 CSMD2Q7Z408 3487 aa7.1□□□□□ -1.27
ATRX-214ENST00000624166 PLAC8Q9NZF1 115 aa7.09□□□□□ -1.27
ATRX-214ENST00000624166 A8MU10 97 aa7.08□□□□□ -1.28
ATRX-214ENST00000624166 Q8N1X5 172 aa7.07□□□□□ -1.28
ATRX-214ENST00000624166 SPINT4Q6UDR6 99 aa7.04□□□□□ -1.28
ATRX-214ENST00000624166 LINC00304Q8N9R0 145 aa7.04□□□□□ -1.28
ATRX-214ENST00000624166 OTOGQ6ZRI0 2925 aa7.04□□□□□ -1.28
ATRX-214ENST00000624166 NBPF19A0A087WUL8 3843 aa7.04□□□□□ -1.28
ATRX-214ENST00000624166 PDZD2O15018 2839 aa7.03□□□□□ -1.28
ATRX-214ENST00000624166 SPATA8Q6RVD6 105 aa7.02□□□□□ -1.29
ATRX-214ENST00000624166 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
ATRX-214ENST00000624166 A0A1B0GU33 70 aa7.01□□□□□ -1.29
ATRX-214ENST00000624166 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
ATRX-214ENST00000624166 CUBNO60494 3623 aa7□□□□□ -1.29
ATRX-214ENST00000624166 A0A087X002 238 aa6.97□□□□□ -1.29
ATRX-214ENST00000624166 H3BS24 57 aa6.97□□□□□ -1.29
ATRX-214ENST00000624166 PANO1I0J062 215 aa6.97□□□□□ -1.29
ATRX-214ENST00000624166 NOTCH2NLQ7Z3S9 236 aa6.97□□□□□ -1.29
ATRX-214ENST00000624166 KRTAP13-1Q8IUC0 172 aa6.96□□□□□ -1.3
ATRX-214ENST00000624166 TENM1Q9UKZ4 2725 aa6.95□□□□□ -1.3
ATRX-214ENST00000624166 CRIPTQ9P021 101 aa6.94□□□□□ -1.3
ATRX-214ENST00000624166 ZFHX3Q15911 3703 aa6.94□□□□□ -1.3
ATRX-214ENST00000624166 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
ATRX-214ENST00000624166 VWFP04275 2813 aa6.89□□□□□ -1.31
ATRX-214ENST00000624166 STAB2Q8WWQ8 2551 aa6.86□□□□□ -1.31
ATRX-214ENST00000624166 FBN1P35555 2871 aaKnown RBP6.85□□□□□ -1.31
ATRX-214ENST00000624166 Q6ZRN7 208 aaPredicted RBP6.83□□□□□ -1.32
ATRX-214ENST00000624166 VPS13CQ709C8 3753 aa6.83□□□□□ -1.32
ATRX-214ENST00000624166 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
ATRX-214ENST00000624166 A0A0D9SG42 100 aa6.81□□□□□ -1.32
ATRX-214ENST00000624166 H1FX-AS1Q4G0G2 97 aa6.79□□□□□ -1.32
ATRX-214ENST00000624166 SMR3BP02814 79 aaPredicted RBP6.75□□□□□ -1.33
ATRX-214ENST00000624166 ROMO1P60602 79 aa6.73□□□□□ -1.33
ATRX-214ENST00000624166 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
ATRX-214ENST00000624166 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
ATRX-214ENST00000624166 TENM3Q9P273 2699 aa6.73□□□□□ -1.33
ATRX-214ENST00000624166 ZNF469Q96JG9 3925 aaPredicted RBP6.68□□□□□ -1.34
ATRX-214ENST00000624166 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
ATRX-214ENST00000624166 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
ATRX-214ENST00000624166 PKD1L1Q8TDX9 2849 aa6.67□□□□□ -1.34
ATRX-214ENST00000624166 KRTAP13-2Q52LG2 175 aa6.66□□□□□ -1.34
ATRX-214ENST00000624166 COX6B2Q6YFQ2 88 aa6.65□□□□□ -1.34
ATRX-214ENST00000624166 RPS29P62273 56 aaKnown RBP6.64□□□□□ -1.35
ATRX-214ENST00000624166 DMBT1Q9UGM3 2413 aaPredicted RBP6.63□□□□□ -1.35
ATRX-214ENST00000624166 S4R3F8 94 aa6.62□□□□□ -1.35
ATRX-214ENST00000624166 TRRAPQ9Y4A5 3859 aa6.61□□□□□ -1.35
ATRX-214ENST00000624166 ANK3Q12955 4377 aaKnown RBP6.59□□□□□ -1.35
ATRX-214ENST00000624166 KRTAP13-3Q3SY46 172 aa6.59□□□□□ -1.36
ATRX-214ENST00000624166 Q6ZSA8 131 aa6.55□□□□□ -1.36
ATRX-214ENST00000624166 A8MUU9 505 aa6.53□□□□□ -1.36
ATRX-214ENST00000624166 FLG2Q5D862 2391 aaPredicted RBP6.52□□□□□ -1.37
ATRX-214ENST00000624166 LUZP6Q538Z0 58 aa6.51□□□□□ -1.37
ATRX-214ENST00000624166 KRTAP16-1A8MUX0 517 aa6.5□□□□□ -1.37
ATRX-214ENST00000624166 TENM2Q9NT68 2774 aa6.5□□□□□ -1.37
ATRX-214ENST00000624166 TGP01266 2768 aa6.49□□□□□ -1.37
ATRX-214ENST00000624166 H0YAA0 97 aa6.47□□□□□ -1.37
ATRX-214ENST00000624166 C20orf166-AS1Q96NR2 134 aa6.46□□□□□ -1.38
ATRX-214ENST00000624166 KRTAP1-4P0C5Y4 121 aa6.43□□□□□ -1.38
ATRX-214ENST00000624166 AKAP9Q99996 3911 aa6.41□□□□□ -1.38
ATRX-214ENST00000624166 R4GN34 69 aa6.38□□□□□ -1.39
ATRX-214ENST00000624166 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
ATRX-214ENST00000624166 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
ATRX-214ENST00000624166 A0A0A0MQY5 61 aa6.34□□□□□ -1.39
ATRX-214ENST00000624166 M0QZ58 72 aa6.33□□□□□ -1.4
ATRX-214ENST00000624166 KRTAP21-3Q3LHN1 58 aa6.27□□□□□ -1.41
ATRX-214ENST00000624166 Q5VSD8 79 aa6.24□□□□□ -1.41
ATRX-214ENST00000624166 J3QL48 77 aa6.22□□□□□ -1.41
ATRX-214ENST00000624166 FBN3Q75N90 2809 aa6.21□□□□□ -1.42
ATRX-214ENST00000624166 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
ATRX-214ENST00000624166 SRRM2Q9UQ35 2752 aaKnown RBP6.19□□□□□ -1.42
ATRX-214ENST00000624166 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
ATRX-214ENST00000624166 MEGF8Q7Z7M0 2845 aa6.1□□□□□ -1.43
ATRX-214ENST00000624166 P0C880 135 aa6.1□□□□□ -1.43
ATRX-214ENST00000624166 COL7A1Q02388 2944 aa6.09□□□□□ -1.44
ATRX-214ENST00000624166 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
ATRX-214ENST00000624166 XP32Q5T750 250 aa6.07□□□□□ -1.44
ATRX-214ENST00000624166 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
ATRX-214ENST00000624166 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
ATRX-214ENST00000624166 TPRXLQ17RH7 258 aa5.99□□□□□ -1.45
ATRX-214ENST00000624166 HUWE1Q7Z6Z7 4374 aaKnown RBP5.98□□□□□ -1.45
ATRX-214ENST00000624166 CSMD3Q7Z407 3707 aa5.96□□□□□ -1.45
ATRX-214ENST00000624166 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
ATRX-214ENST00000624166 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
ATRX-214ENST00000624166 DNHD1Q96M86 4753 aa5.9□□□□□ -1.46
ATRX-214ENST00000624166 KRTAP12-1P59990 96 aa5.9□□□□□ -1.47
ATRX-214ENST00000624166 TNP1P09430 55 aa5.89□□□□□ -1.47
ATRX-214ENST00000624166 KRTAP13-4Q3LI77 160 aa5.88□□□□□ -1.47
ATRX-214ENST00000624166 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
ATRX-214ENST00000624166 KRTAP10-8P60410 259 aa5.86□□□□□ -1.47
ATRX-214ENST00000624166 M0R2T5 61 aa5.84□□□□□ -1.47
ATRX-214ENST00000624166 A0A1B0GVY2 172 aa5.79□□□□□ -1.48
ATRX-214ENST00000624166 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
ATRX-214ENST00000624166 ANK2Q01484 3957 aa5.78□□□□□ -1.48
ATRX-214ENST00000624166 KRTAP3-2Q9BYR7 98 aa5.77□□□□□ -1.49
ATRX-214ENST00000624166 PLECQ15149 4684 aaKnown RBP5.77□□□□□ -1.49
ATRX-214ENST00000624166 PRKDCP78527 4128 aaKnown RBP5.76□□□□□ -1.49
ATRX-214ENST00000624166 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
ATRX-214ENST00000624166 DNAH10Q8IVF4 4471 aa5.68□□□□□ -1.5
ATRX-214ENST00000624166 STARD9Q9P2P6 4700 aa5.68□□□□□ -1.5
ATRX-214ENST00000624166 CMYA5Q8N3K9 4069 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms