RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 TNP1P09430 55 aa1.09□□□□□ -2.23
AC004943.3-201ENST00000624116 RHPN1-AS1Q9BWJ2 59 aa1.09□□□□□ -2.23
AC004943.3-201ENST00000624116 SACSQ9NZJ4 4579 aa1.09□□□□□ -2.23
AC004943.3-201ENST00000624116 CRYBG3Q68DQ2 2970 aa1.09□□□□□ -2.24
AC004943.3-201ENST00000624116 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
AC004943.3-201ENST00000624116 PRM1P04553 51 aa1.08□□□□□ -2.24
AC004943.3-201ENST00000624116 SPTBN4Q9H254 2564 aa1.08□□□□□ -2.24
AC004943.3-201ENST00000624116 DMBT1Q9UGM3 2413 aaPredicted RBP1.07□□□□□ -2.24
AC004943.3-201ENST00000624116 SPART-AS1P0CW21 52 aa1.07□□□□□ -2.24
AC004943.3-201ENST00000624116 NCOR1O75376 2440 aa1.07□□□□□ -2.24
AC004943.3-201ENST00000624116 NAV2Q8IVL1 2488 aa1.06□□□□□ -2.24
AC004943.3-201ENST00000624116 H3BNG1 76 aa1.06□□□□□ -2.24
AC004943.3-201ENST00000624116 ZFHX4Q86UP3 3567 aa1.06□□□□□ -2.24
AC004943.3-201ENST00000624116 ATRQ13535 2644 aa1.06□□□□□ -2.24
AC004943.3-201ENST00000624116 KMT2AQ03164 3969 aa1.06□□□□□ -2.24
AC004943.3-201ENST00000624116 CCDC168Q8NDH2 2452 aa1.06□□□□□ -2.24
AC004943.3-201ENST00000624116 ANK2Q01484 3957 aa1.06□□□□□ -2.24
AC004943.3-201ENST00000624116 SPTA1P02549 2419 aa1.05□□□□□ -2.24
AC004943.3-201ENST00000624116 TNXBP22105 4242 aa1.05□□□□□ -2.24
AC004943.3-201ENST00000624116 H3BUX3 64 aa1.05□□□□□ -2.24
AC004943.3-201ENST00000624116 HECTD1Q9ULT8 2610 aa1.05□□□□□ -2.24
AC004943.3-201ENST00000624116 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
AC004943.3-201ENST00000624116 DCHS2Q6V1P9 2916 aa1.04□□□□□ -2.24
AC004943.3-201ENST00000624116 ZNF469Q96JG9 3925 aaPredicted RBP1.04□□□□□ -2.24
AC004943.3-201ENST00000624116 VPS13BQ7Z7G8 4022 aa1.04□□□□□ -2.24
AC004943.3-201ENST00000624116 CHD6Q8TD26 2715 aa1.04□□□□□ -2.24
AC004943.3-201ENST00000624116 PRKDCP78527 4128 aaKnown RBP1.03□□□□□ -2.25
AC004943.3-201ENST00000624116 C9orf92A6NGG3 77 aa1.02□□□□□ -2.25
AC004943.3-201ENST00000624116 FRYQ5TBA9 3013 aa1.02□□□□□ -2.25
AC004943.3-201ENST00000624116 COL6A3P12111 3177 aa1.01□□□□□ -2.25
AC004943.3-201ENST00000624116 FAT2Q9NYQ8 4349 aa1.01□□□□□ -2.25
AC004943.3-201ENST00000624116 DEFB110Q30KQ9 67 aa1.01□□□□□ -2.25
AC004943.3-201ENST00000624116 DNAH8Q96JB1 4490 aa1.01□□□□□ -2.25
AC004943.3-201ENST00000624116 SPENQ96T58 3664 aaKnown RBP1.01□□□□□ -2.25
AC004943.3-201ENST00000624116 KRTAP19-3Q7Z4W3 81 aa1□□□□□ -2.25
AC004943.3-201ENST00000624116 COX14Q96I36 57 aa1□□□□□ -2.25
AC004943.3-201ENST00000624116 PIEZO1Q92508 2521 aa0.99□□□□□ -2.25
AC004943.3-201ENST00000624116 FRAS1Q86XX4 4008 aa0.99□□□□□ -2.25
AC004943.3-201ENST00000624116 DEFB108BQ8NET1 73 aa0.99□□□□□ -2.25
AC004943.3-201ENST00000624116 U3KQA8 63 aa0.98□□□□□ -2.25
AC004943.3-201ENST00000624116 TENM3Q9P273 2699 aa0.98□□□□□ -2.25
AC004943.3-201ENST00000624116 RANBP2P49792 3224 aaKnown RBP0.98□□□□□ -2.25
AC004943.3-201ENST00000624116 APC2O95996 2303 aa0.98□□□□□ -2.25
AC004943.3-201ENST00000624116 RELNP78509 3460 aa0.97□□□□□ -2.25
AC004943.3-201ENST00000624116 SETD2Q9BYW2 2564 aaPredicted RBP0.97□□□□□ -2.25
AC004943.3-201ENST00000624116 AKAP9Q99996 3911 aa0.96□□□□□ -2.25
AC004943.3-201ENST00000624116 CFAP54Q96N23 3096 aa0.96□□□□□ -2.26
AC004943.3-201ENST00000624116 NBASA2RRP1 2371 aa0.96□□□□□ -2.26
AC004943.3-201ENST00000624116 STAB1Q9NY15 2570 aa0.96□□□□□ -2.26
AC004943.3-201ENST00000624116 NF1P21359 2839 aa0.96□□□□□ -2.26
AC004943.3-201ENST00000624116 BDP1A6H8Y1 2624 aa0.95□□□□□ -2.26
AC004943.3-201ENST00000624116 A0A096LPF7 62 aa0.95□□□□□ -2.26
AC004943.3-201ENST00000624116 CREBBPQ92793 2442 aa0.94□□□□□ -2.26
AC004943.3-201ENST00000624116 KRTAP8-1Q8IUC2 63 aa0.94□□□□□ -2.26
AC004943.3-201ENST00000624116 DYNC2H1Q8NCM8 4307 aaKnown RBP0.94□□□□□ -2.26
AC004943.3-201ENST00000624116 COL7A1Q02388 2944 aa0.94□□□□□ -2.26
AC004943.3-201ENST00000624116 COL12A1Q99715 3063 aa0.93□□□□□ -2.26
AC004943.3-201ENST00000624116 DMXL1Q9Y485 3027 aa0.93□□□□□ -2.26
AC004943.3-201ENST00000624116 DEFB124Q8NES8 71 aa0.93□□□□□ -2.26
AC004943.3-201ENST00000624116 HSPG2P98160 4391 aa0.93□□□□□ -2.26
AC004943.3-201ENST00000624116 DNAH2Q9P225 4427 aa0.93□□□□□ -2.26
AC004943.3-201ENST00000624116 PKHD1L1Q86WI1 4243 aa0.93□□□□□ -2.26
AC004943.3-201ENST00000624116 ITPR3Q14573 2671 aa0.92□□□□□ -2.26
AC004943.3-201ENST00000624116 GCN1Q92616 2671 aaKnown RBP0.92□□□□□ -2.26
AC004943.3-201ENST00000624116 C5orf42Q9H799 3197 aa0.92□□□□□ -2.26
AC004943.3-201ENST00000624116 TACC2O95359 2948 aa0.92□□□□□ -2.26
AC004943.3-201ENST00000624116 CUBNO60494 3623 aa0.91□□□□□ -2.26
AC004943.3-201ENST00000624116 CELSR3Q9NYQ7 3312 aa0.91□□□□□ -2.26
AC004943.3-201ENST00000624116 CHD8Q9HCK8 2581 aa0.91□□□□□ -2.26
AC004943.3-201ENST00000624116 DNAH7Q8WXX0 4024 aa0.9□□□□□ -2.26
AC004943.3-201ENST00000624116 ANK3Q12955 4377 aaKnown RBP0.9□□□□□ -2.27
AC004943.3-201ENST00000624116 HECTD4Q9Y4D8 3996 aa0.9□□□□□ -2.27
AC004943.3-201ENST00000624116 ZZEF1O43149 2961 aa0.9□□□□□ -2.27
AC004943.3-201ENST00000624116 FLNCQ14315 2725 aa0.89□□□□□ -2.27
AC004943.3-201ENST00000624116 PKD1L1Q8TDX9 2849 aa0.88□□□□□ -2.27
AC004943.3-201ENST00000624116 DNAH3Q8TD57 4116 aa0.88□□□□□ -2.27
AC004943.3-201ENST00000624116 SMR3BP02814 79 aaPredicted RBP0.88□□□□□ -2.27
AC004943.3-201ENST00000624116 FRYLO94915 3013 aa0.88□□□□□ -2.27
AC004943.3-201ENST00000624116 USP9YO00507 2555 aaPredicted RBP0.88□□□□□ -2.27
AC004943.3-201ENST00000624116 USP24Q9UPU5 2620 aa0.87□□□□□ -2.27
AC004943.3-201ENST00000624116 SPTBN5Q9NRC6 3674 aaKnown RBP0.87□□□□□ -2.27
AC004943.3-201ENST00000624116 ATMQ13315 3056 aa0.87□□□□□ -2.27
AC004943.3-201ENST00000624116 HIVEP3Q5T1R4 2406 aa0.86□□□□□ -2.27
AC004943.3-201ENST00000624116 APCP25054 2843 aa0.86□□□□□ -2.27
AC004943.3-201ENST00000624116 WDR87Q6ZQQ6 2873 aa0.86□□□□□ -2.27
AC004943.3-201ENST00000624116 NBEAL2Q6ZNJ1 2754 aa0.86□□□□□ -2.27
AC004943.3-201ENST00000624116 PKD1P98161 4303 aa0.86□□□□□ -2.27
AC004943.3-201ENST00000624116 ACANP16112 2415 aa0.86□□□□□ -2.27
AC004943.3-201ENST00000624116 NOTCH1P46531 2555 aa0.86□□□□□ -2.27
AC004943.3-201ENST00000624116 LRP1Q07954 4544 aaKnown RBP0.85□□□□□ -2.27
AC004943.3-201ENST00000624116 ZANQ9Y493 2812 aa0.84□□□□□ -2.27
AC004943.3-201ENST00000624116 FAT3Q8TDW7 4589 aa0.84□□□□□ -2.28
AC004943.3-201ENST00000624116 DNAH10Q8IVF4 4471 aa0.83□□□□□ -2.28
AC004943.3-201ENST00000624116 DMXL2Q8TDJ6 3036 aa0.83□□□□□ -2.28
AC004943.3-201ENST00000624116 DNAH12Q6ZR08 3092 aa0.83□□□□□ -2.28
AC004943.3-201ENST00000624116 PRUNE2Q8WUY3 3088 aa0.83□□□□□ -2.28
AC004943.3-201ENST00000624116 FLGP20930 4061 aaPredicted RBP0.83□□□□□ -2.28
AC004943.3-201ENST00000624116 MAP1BP46821 2468 aaKnown RBP0.83□□□□□ -2.28
AC004943.3-201ENST00000624116 KALRNO60229 2985 aa0.83□□□□□ -2.28
AC004943.3-201ENST00000624116 MKI67P46013 3256 aaKnown RBP0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms