RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 MYO15AQ9UKN7 3530 aa7.44□□□□□ -1.22
PTPN9-206ENST00000618819 SPEGQ15772 3267 aa7.43□□□□□ -1.22
PTPN9-206ENST00000618819 NSD1Q96L73 2696 aaPredicted RBP7.43□□□□□ -1.22
PTPN9-206ENST00000618819 KRTAP12-2P59991 146 aa7.41□□□□□ -1.22
PTPN9-206ENST00000618819 IGSF10Q6WRI0 2623 aa7.41□□□□□ -1.22
PTPN9-206ENST00000618819 FRYLO94915 3013 aa7.4□□□□□ -1.22
PTPN9-206ENST00000618819 TNRC18O15417 2968 aaPredicted RBP7.37□□□□□ -1.23
PTPN9-206ENST00000618819 KRTAP1-4P0C5Y4 121 aa7.37□□□□□ -1.23
PTPN9-206ENST00000618819 FRYQ5TBA9 3013 aa7.37□□□□□ -1.23
PTPN9-206ENST00000618819 APCP25054 2843 aa7.37□□□□□ -1.23
PTPN9-206ENST00000618819 EYSQ5T1H1 3165 aa7.35□□□□□ -1.23
PTPN9-206ENST00000618819 NBEAQ8NFP9 2946 aa7.35□□□□□ -1.23
PTPN9-206ENST00000618819 UBR5O95071 2799 aaPredicted RBP7.32□□□□□ -1.24
PTPN9-206ENST00000618819 TPRXLQ17RH7 258 aa7.3□□□□□ -1.24
PTPN9-206ENST00000618819 KMT2BQ9UMN6 2715 aaPredicted RBP7.29□□□□□ -1.24
PTPN9-206ENST00000618819 ITPR1Q14643 2758 aa7.27□□□□□ -1.25
PTPN9-206ENST00000618819 SETXQ7Z333 2677 aaKnown RBP7.27□□□□□ -1.25
PTPN9-206ENST00000618819 COL6A3P12111 3177 aa7.26□□□□□ -1.25
PTPN9-206ENST00000618819 BOD1L1Q8NFC6 3051 aa7.25□□□□□ -1.25
PTPN9-206ENST00000618819 KALRNO60229 2985 aa7.25□□□□□ -1.25
PTPN9-206ENST00000618819 ASH1LQ9NR48 2969 aaKnown RBP7.23□□□□□ -1.25
PTPN9-206ENST00000618819 MAP1AP78559 2803 aaPredicted RBP7.22□□□□□ -1.25
PTPN9-206ENST00000618819 LRBAP50851 2863 aa7.22□□□□□ -1.25
PTPN9-206ENST00000618819 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.25
PTPN9-206ENST00000618819 ADGRG4Q8IZF6 3080 aa7.19□□□□□ -1.26
PTPN9-206ENST00000618819 TACC2O95359 2948 aa7.17□□□□□ -1.26
PTPN9-206ENST00000618819 WDFY3Q8IZQ1 3526 aa7.17□□□□□ -1.26
PTPN9-206ENST00000618819 KRTAP12-1P59990 96 aa7.14□□□□□ -1.27
PTPN9-206ENST00000618819 KRTAP13-3Q3SY46 172 aa7.14□□□□□ -1.27
PTPN9-206ENST00000618819 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
PTPN9-206ENST00000618819 DMXL2Q8TDJ6 3036 aa7.13□□□□□ -1.27
PTPN9-206ENST00000618819 LOC400499M0QZD8 3231 aa7.13□□□□□ -1.27
PTPN9-206ENST00000618819 UTP20O75691 2785 aaKnown RBP7.13□□□□□ -1.27
PTPN9-206ENST00000618819 HIVEP1P15822 2718 aa7.13□□□□□ -1.27
PTPN9-206ENST00000618819 ITPR2Q14571 2701 aa7.12□□□□□ -1.27
PTPN9-206ENST00000618819 DMXL1Q9Y485 3027 aa7.1□□□□□ -1.27
PTPN9-206ENST00000618819 ZZEF1O43149 2961 aa7.07□□□□□ -1.28
PTPN9-206ENST00000618819 ATMQ13315 3056 aa7.06□□□□□ -1.28
PTPN9-206ENST00000618819 CRYBG3Q68DQ2 2970 aa7.03□□□□□ -1.28
PTPN9-206ENST00000618819 HRNRQ86YZ3 2850 aaPredicted RBP7.03□□□□□ -1.28
PTPN9-206ENST00000618819 DMDP11532 3685 aa7.02□□□□□ -1.29
PTPN9-206ENST00000618819 FLNCQ14315 2725 aa7.02□□□□□ -1.29
PTPN9-206ENST00000618819 INE1O15225 51 aa6.96□□□□□ -1.3
PTPN9-206ENST00000618819 TGP01266 2768 aa6.96□□□□□ -1.3
PTPN9-206ENST00000618819 COL12A1Q99715 3063 aa6.96□□□□□ -1.3
PTPN9-206ENST00000618819 CFAP47Q6ZTR5 3102 aa6.95□□□□□ -1.3
PTPN9-206ENST00000618819 CRCT1Q9UGL9 99 aa6.89□□□□□ -1.31
PTPN9-206ENST00000618819 ASPMQ8IZT6 3477 aa6.89□□□□□ -1.31
PTPN9-206ENST00000618819 LAMA5O15230 3695 aa6.84□□□□□ -1.31
PTPN9-206ENST00000618819 KRTAP3-1Q9BYR8 98 aa6.84□□□□□ -1.31
PTPN9-206ENST00000618819 MUC3AQ02505 3323 aa6.84□□□□□ -1.32
PTPN9-206ENST00000618819 ZFHX4Q86UP3 3567 aa6.82□□□□□ -1.32
PTPN9-206ENST00000618819 ZANQ9Y493 2812 aa6.81□□□□□ -1.32
PTPN9-206ENST00000618819 CELSR2Q9HCU4 2923 aa6.78□□□□□ -1.32
PTPN9-206ENST00000618819 DCHS1Q96JQ0 3298 aa6.76□□□□□ -1.33
PTPN9-206ENST00000618819 DCHS2Q6V1P9 2916 aa6.75□□□□□ -1.33
PTPN9-206ENST00000618819 SMG1Q96Q15 3661 aaKnown RBP6.75□□□□□ -1.33
PTPN9-206ENST00000618819 TENM3Q9P273 2699 aa6.73□□□□□ -1.33
PTPN9-206ENST00000618819 KRTAP10-6P60371 365 aaPredicted RBP6.72□□□□□ -1.33
PTPN9-206ENST00000618819 BSNQ9UPA5 3926 aa6.71□□□□□ -1.34
PTPN9-206ENST00000618819 MXRA5Q9NR99 2828 aa6.7□□□□□ -1.34
PTPN9-206ENST00000618819 RELNP78509 3460 aa6.68□□□□□ -1.34
PTPN9-206ENST00000618819 NF1P21359 2839 aa6.67□□□□□ -1.34
PTPN9-206ENST00000618819 SPENQ96T58 3664 aaKnown RBP6.66□□□□□ -1.34
PTPN9-206ENST00000618819 FBN2P35556 2912 aa6.64□□□□□ -1.35
PTPN9-206ENST00000618819 TENM1Q9UKZ4 2725 aa6.64□□□□□ -1.35
PTPN9-206ENST00000618819 TENM4Q6N022 2769 aa6.62□□□□□ -1.35
PTPN9-206ENST00000618819 CSMD1Q96PZ7 3565 aa6.62□□□□□ -1.35
PTPN9-206ENST00000618819 KRTAP21-3Q3LHN1 58 aa6.57□□□□□ -1.36
PTPN9-206ENST00000618819 NIPBLQ6KC79 2804 aaeCLIP6.55□□□□□ -1.36
PTPN9-206ENST00000618819 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
PTPN9-206ENST00000618819 PDZD2O15018 2839 aa6.53□□□□□ -1.36
PTPN9-206ENST00000618819 TENM2Q9NT68 2774 aa6.52□□□□□ -1.36
PTPN9-206ENST00000618819 CELSR1Q9NYQ6 3014 aa6.52□□□□□ -1.37
PTPN9-206ENST00000618819 SVEP1Q4LDE5 3571 aa6.47□□□□□ -1.37
PTPN9-206ENST00000618819 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
PTPN9-206ENST00000618819 CUBNO60494 3623 aa6.4□□□□□ -1.38
PTPN9-206ENST00000618819 KRTAP10-5P60370 271 aa6.39□□□□□ -1.39
PTPN9-206ENST00000618819 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
PTPN9-206ENST00000618819 LCE3AQ5TA76 89 aa6.36□□□□□ -1.39
PTPN9-206ENST00000618819 NBPF19A0A087WUL8 3843 aa6.34□□□□□ -1.39
PTPN9-206ENST00000618819 KRTAP3-3Q9BYR6 98 aa6.33□□□□□ -1.4
PTPN9-206ENST00000618819 VWFP04275 2813 aa6.3□□□□□ -1.4
PTPN9-206ENST00000618819 VPS13CQ709C8 3753 aa6.28□□□□□ -1.4
PTPN9-206ENST00000618819 ZFHX3Q15911 3703 aa6.27□□□□□ -1.41
PTPN9-206ENST00000618819 PKD1L1Q8TDX9 2849 aa6.25□□□□□ -1.41
PTPN9-206ENST00000618819 SRRM2Q9UQ35 2752 aaKnown RBP6.24□□□□□ -1.41
PTPN9-206ENST00000618819 AKAP9Q99996 3911 aa6.21□□□□□ -1.42
PTPN9-206ENST00000618819 CSMD2Q7Z408 3487 aa6.15□□□□□ -1.42
PTPN9-206ENST00000618819 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
PTPN9-206ENST00000618819 OTOGQ6ZRI0 2925 aa6.07□□□□□ -1.44
PTPN9-206ENST00000618819 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
PTPN9-206ENST00000618819 ZNF469Q96JG9 3925 aaPredicted RBP6.07□□□□□ -1.44
PTPN9-206ENST00000618819 ANK3Q12955 4377 aaKnown RBP6.06□□□□□ -1.44
PTPN9-206ENST00000618819 MEGF8Q7Z7M0 2845 aa6.05□□□□□ -1.44
PTPN9-206ENST00000618819 TRRAPQ9Y4A5 3859 aa6.05□□□□□ -1.44
PTPN9-206ENST00000618819 MT1HL1P0DM35 61 aa5.98□□□□□ -1.45
PTPN9-206ENST00000618819 FBN3Q75N90 2809 aa5.95□□□□□ -1.46
PTPN9-206ENST00000618819 FBN1P35555 2871 aaKnown RBP5.94□□□□□ -1.46
PTPN9-206ENST00000618819 KRTAP8-1Q8IUC2 63 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 245.2 ms