RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 TLN2Q9Y4G6 2542 aa-0.07□□□□□ -2.42
TARDBP-220ENST00000618606 C4AP0C0L4 1744 aa-0.07□□□□□ -2.42
TARDBP-220ENST00000618606 C4BP0C0L5 1744 aa-0.07□□□□□ -2.42
TARDBP-220ENST00000618606 PKD1P98161 4303 aa-0.07□□□□□ -2.42
TARDBP-220ENST00000618606 DEFB106AQ8N104 65 aa-0.07□□□□□ -2.42
TARDBP-220ENST00000618606 ITPR2Q14571 2701 aa-0.07□□□□□ -2.42
TARDBP-220ENST00000618606 MYO9AB2RTY4 2548 aa-0.07□□□□□ -2.42
TARDBP-220ENST00000618606 CENPFP49454 3210 aa-0.07□□□□□ -2.42
TARDBP-220ENST00000618606 CFAP74Q9C0B2 1584 aa-0.07□□□□□ -2.42
TARDBP-220ENST00000618606 RELNP78509 3460 aa-0.07□□□□□ -2.42
TARDBP-220ENST00000618606 CSMD2Q7Z408 3487 aa-0.07□□□□□ -2.42
TARDBP-220ENST00000618606 RANBP2P49792 3224 aaKnown RBP-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 SACSQ9NZJ4 4579 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 DNAH6Q9C0G6 4158 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 NESP48681 1621 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 CICQ96RK0 1608 aaPredicted RBP-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 H0YAA0 97 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 H3BVH4 76 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 DEFB110Q30KQ9 67 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 S4R3F8 94 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 FREM2Q5SZK8 3169 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 ANKRD50Q9ULJ7 1429 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 FLGP20930 4061 aaPredicted RBP-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 ADGRG4Q8IZF6 3080 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 DNAH3Q8TD57 4116 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 PKHD1L1Q86WI1 4243 aa-0.08□□□□□ -2.42
TARDBP-220ENST00000618606 CD163L1Q9NR16 1453 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 USP34Q70CQ2 3546 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 WDFY3Q8IZQ1 3526 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 CDH23Q9H251 3354 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 ANK3Q12955 4377 aaKnown RBP-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 TIAM2Q8IVF5 1701 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 ANKARQ7Z5J8 1434 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 SFTA3P0C7M3 94 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 C3orf79P0CE67 100 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 IAPPP10997 89 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 PRLHP81277 87 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 SPRR2FQ96RM1 72 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 DMXL1Q9Y485 3027 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 UTRNP46939 3433 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 DNAH8Q96JB1 4490 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 AKAP9Q99996 3911 aa-0.09□□□□□ -2.42
TARDBP-220ENST00000618606 DNAH12Q6ZR08 3092 aa-0.1□□□□□ -2.42
TARDBP-220ENST00000618606 RICTORQ6R327 1708 aa-0.1□□□□□ -2.42
TARDBP-220ENST00000618606 DYNC1H1Q14204 4646 aaKnown RBP-0.1□□□□□ -2.42
TARDBP-220ENST00000618606 ABCA8O94911 1581 aa-0.1□□□□□ -2.42
TARDBP-220ENST00000618606 PLCH1Q4KWH8 1693 aa-0.1□□□□□ -2.43
TARDBP-220ENST00000618606 DEFB130BP0DP73 79 aa-0.1□□□□□ -2.43
TARDBP-220ENST00000618606 DEFB130AP0DP74 79 aa-0.1□□□□□ -2.43
TARDBP-220ENST00000618606 FCER1GP30273 86 aa-0.1□□□□□ -2.43
TARDBP-220ENST00000618606 GNG13Q9P2W3 67 aa-0.1□□□□□ -2.43
TARDBP-220ENST00000618606 SCN11AQ9UI33 1791 aa-0.1□□□□□ -2.43
TARDBP-220ENST00000618606 CEP350Q5VT06 3117 aa-0.1□□□□□ -2.43
TARDBP-220ENST00000618606 CCDC88BA6NC98 1476 aa-0.1□□□□□ -2.43
TARDBP-220ENST00000618606 ADAMTS12P58397 1594 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 DNAH1Q9P2D7 4330 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 SCRIBQ14160 1630 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 PTPN23Q9H3S7 1636 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 CRIP1P50238 77 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 MINOS1Q5TGZ0 78 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 ENHOQ6UWT2 76 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 HILPDAQ9Y5L2 63 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 LRBAP50851 2863 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 MGAQ8IWI9 3026 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 DMXL2Q8TDJ6 3036 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 CFAP43Q8NDM7 1665 aa-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.11□□□□□ -2.43
TARDBP-220ENST00000618606 MAP3K1Q13233 1512 aa-0.12□□□□□ -2.43
TARDBP-220ENST00000618606 IGLV5-48A0A075B6I7 105 aa-0.12□□□□□ -2.43
TARDBP-220ENST00000618606 C9orf92A6NGG3 77 aa-0.12□□□□□ -2.43
TARDBP-220ENST00000618606 ZZEF1O43149 2961 aa-0.12□□□□□ -2.43
TARDBP-220ENST00000618606 CRYBG3Q68DQ2 2970 aa-0.12□□□□□ -2.43
TARDBP-220ENST00000618606 NCBP2-AS2Q69YL0 99 aa-0.12□□□□□ -2.43
TARDBP-220ENST00000618606 UBL5Q9BZL1 73 aa-0.12□□□□□ -2.43
TARDBP-220ENST00000618606 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.12□□□□□ -2.43
TARDBP-220ENST00000618606 DNAH5Q8TE73 4624 aa-0.12□□□□□ -2.43
TARDBP-220ENST00000618606 VPS13BQ7Z7G8 4022 aa-0.12□□□□□ -2.43
TARDBP-220ENST00000618606 CFAP54Q96N23 3096 aa-0.12□□□□□ -2.43
TARDBP-220ENST00000618606 DNAH17Q9UFH2 4485 aa-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 CEP250Q9BV73 2442 aa-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 WIZO95785 1651 aa-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 PLXNC1O60486 1568 aa-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 DIP2AQ14689 1571 aa-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 ETDCA0A1B0GVM5 59 aa-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 MRPL33O75394 65 aaKnown RBP-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 SMR3BP02814 79 aaPredicted RBP-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 DEFB1P60022 68 aa-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 ABRACLQ9P1F3 81 aa-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 C6orf48Q9UBA6 75 aa-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 DNAH14Q0VDD8 3507 aa-0.13□□□□□ -2.43
TARDBP-220ENST00000618606 DNAH7Q8WXX0 4024 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 CHD7Q9P2D1 2997 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 VPS13CQ709C8 3753 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 DEFB131BA0A096LNP1 70 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 WT1-ASQ06250 92 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 ATXN8Q156A1 80 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 SMCO4Q9NRQ5 59 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 KAAG1Q9UBP8 84 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 LRRIQ1Q96JM4 1722 aa-0.14□□□□□ -2.43
TARDBP-220ENST00000618606 IQGAP3Q86VI3 1631 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms