RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 MXRA5Q9NR99 2828 aa6.21□□□□□ -1.42
TPT1-214ENST00000616577 Q6ZSA8 131 aa6.19□□□□□ -1.42
TPT1-214ENST00000616577 KRTAP10-2P60368 255 aa6.19□□□□□ -1.42
TPT1-214ENST00000616577 LINC00483Q53H64 154 aa6.19□□□□□ -1.42
TPT1-214ENST00000616577 KRTAP11-1Q8IUC1 163 aa6.19□□□□□ -1.42
TPT1-214ENST00000616577 Q6ZR54 194 aa6.18□□□□□ -1.42
TPT1-214ENST00000616577 A0A087X002 238 aa6.18□□□□□ -1.42
TPT1-214ENST00000616577 KRTAP10-1P60331 282 aa6.18□□□□□ -1.42
TPT1-214ENST00000616577 CSAG1Q6PB30 78 aa6.18□□□□□ -1.42
TPT1-214ENST00000616577 NOTCH2NLQ7Z3S9 236 aa6.18□□□□□ -1.42
TPT1-214ENST00000616577 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
TPT1-214ENST00000616577 KRTAP7-1Q8IUC3 87 aa6.17□□□□□ -1.42
TPT1-214ENST00000616577 CELSR1Q9NYQ6 3014 aa6.12□□□□□ -1.43
TPT1-214ENST00000616577 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
TPT1-214ENST00000616577 S4R3F8 94 aa6.09□□□□□ -1.43
TPT1-214ENST00000616577 LCE6AA0A183 80 aa6.08□□□□□ -1.44
TPT1-214ENST00000616577 LUZP6Q538Z0 58 aa6.06□□□□□ -1.44
TPT1-214ENST00000616577 SMG1Q96Q15 3661 aaKnown RBP6.06□□□□□ -1.44
TPT1-214ENST00000616577 PKD1L1Q8TDX9 2849 aa6.06□□□□□ -1.44
TPT1-214ENST00000616577 Q6ZRN7 208 aaPredicted RBP6.04□□□□□ -1.44
TPT1-214ENST00000616577 H3BS24 57 aa6.04□□□□□ -1.44
TPT1-214ENST00000616577 FBN1P35555 2871 aaKnown RBP6.04□□□□□ -1.44
TPT1-214ENST00000616577 A8MU10 97 aa6.04□□□□□ -1.44
TPT1-214ENST00000616577 RPL37P61927 97 aaKnown RBP6.04□□□□□ -1.44
TPT1-214ENST00000616577 TENM3Q9P273 2699 aa6.03□□□□□ -1.44
TPT1-214ENST00000616577 H1FX-AS1Q4G0G2 97 aa6.03□□□□□ -1.44
TPT1-214ENST00000616577 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.44
TPT1-214ENST00000616577 CUBNO60494 3623 aa6.02□□□□□ -1.45
TPT1-214ENST00000616577 R4GN34 69 aa6.01□□□□□ -1.45
TPT1-214ENST00000616577 KRTAP13-1Q8IUC0 172 aa5.99□□□□□ -1.45
TPT1-214ENST00000616577 TENM1Q9UKZ4 2725 aa5.99□□□□□ -1.45
TPT1-214ENST00000616577 Q5VSD8 79 aa5.99□□□□□ -1.45
TPT1-214ENST00000616577 ROMO1P60602 79 aa5.98□□□□□ -1.45
TPT1-214ENST00000616577 A6NN06 94 aa5.96□□□□□ -1.45
TPT1-214ENST00000616577 ASB16-AS1Q495Z4 193 aa5.96□□□□□ -1.46
TPT1-214ENST00000616577 OTOGQ6ZRI0 2925 aa5.95□□□□□ -1.46
TPT1-214ENST00000616577 KRTAP13-2Q52LG2 175 aa5.95□□□□□ -1.46
TPT1-214ENST00000616577 ZFHX3Q15911 3703 aa5.95□□□□□ -1.46
TPT1-214ENST00000616577 CSMD1Q96PZ7 3565 aa5.94□□□□□ -1.46
TPT1-214ENST00000616577 M0R2T5 61 aa5.94□□□□□ -1.46
TPT1-214ENST00000616577 PDZD2O15018 2839 aa5.93□□□□□ -1.46
TPT1-214ENST00000616577 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
TPT1-214ENST00000616577 SVEP1Q4LDE5 3571 aa5.92□□□□□ -1.46
TPT1-214ENST00000616577 M0QZ58 72 aa5.91□□□□□ -1.46
TPT1-214ENST00000616577 VWFP04275 2813 aa5.91□□□□□ -1.46
TPT1-214ENST00000616577 SEC61BP60468 96 aaKnown RBP5.89□□□□□ -1.47
TPT1-214ENST00000616577 CSMD2Q7Z408 3487 aa5.87□□□□□ -1.47
TPT1-214ENST00000616577 NBPF19A0A087WUL8 3843 aa5.84□□□□□ -1.47
TPT1-214ENST00000616577 RPS29P62273 56 aaKnown RBP5.82□□□□□ -1.48
TPT1-214ENST00000616577 TENM2Q9NT68 2774 aa5.81□□□□□ -1.48
TPT1-214ENST00000616577 SRRM2Q9UQ35 2752 aaKnown RBP5.81□□□□□ -1.48
TPT1-214ENST00000616577 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
TPT1-214ENST00000616577 TGP01266 2768 aa5.79□□□□□ -1.48
TPT1-214ENST00000616577 A0A0A0MQY5 61 aa5.77□□□□□ -1.49
TPT1-214ENST00000616577 SPENQ96T58 3664 aaKnown RBP5.75□□□□□ -1.49
TPT1-214ENST00000616577 KRTAP21-3Q3LHN1 58 aa5.74□□□□□ -1.49
TPT1-214ENST00000616577 A8MUU9 505 aa5.71□□□□□ -1.49
TPT1-214ENST00000616577 KRTAP1-4P0C5Y4 121 aa5.68□□□□□ -1.5
TPT1-214ENST00000616577 C20orf166-AS1Q96NR2 134 aa5.67□□□□□ -1.5
TPT1-214ENST00000616577 NDUFAF8A1L188 74 aa5.63□□□□□ -1.51
TPT1-214ENST00000616577 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
TPT1-214ENST00000616577 KRTAP16-1A8MUX0 517 aa5.58□□□□□ -1.52
TPT1-214ENST00000616577 H0YAA0 97 aa5.58□□□□□ -1.52
TPT1-214ENST00000616577 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
TPT1-214ENST00000616577 XP32Q5T750 250 aa5.52□□□□□ -1.53
TPT1-214ENST00000616577 TRRAPQ9Y4A5 3859 aa5.51□□□□□ -1.53
TPT1-214ENST00000616577 BSNQ9UPA5 3926 aa5.48□□□□□ -1.53
TPT1-214ENST00000616577 KRTAP13-3Q3SY46 172 aa5.47□□□□□ -1.53
TPT1-214ENST00000616577 TNP1P09430 55 aa5.44□□□□□ -1.54
TPT1-214ENST00000616577 FBN3Q75N90 2809 aa5.44□□□□□ -1.54
TPT1-214ENST00000616577 P0C880 135 aa5.43□□□□□ -1.54
TPT1-214ENST00000616577 COL7A1Q02388 2944 aa5.4□□□□□ -1.55
TPT1-214ENST00000616577 A0A1B0GVY2 172 aa5.35□□□□□ -1.55
TPT1-214ENST00000616577 KRTAP10-8P60410 259 aa5.32□□□□□ -1.56
TPT1-214ENST00000616577 TPRXLQ17RH7 258 aa5.32□□□□□ -1.56
TPT1-214ENST00000616577 VPS13CQ709C8 3753 aa5.31□□□□□ -1.56
TPT1-214ENST00000616577 MEGF8Q7Z7M0 2845 aa5.31□□□□□ -1.56
TPT1-214ENST00000616577 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
TPT1-214ENST00000616577 ANK3Q12955 4377 aaKnown RBP5.29□□□□□ -1.56
TPT1-214ENST00000616577 ZNF469Q96JG9 3925 aaPredicted RBP5.22□□□□□ -1.57
TPT1-214ENST00000616577 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
TPT1-214ENST00000616577 KRTAP12-2P59991 146 aa5.21□□□□□ -1.58
TPT1-214ENST00000616577 KRTAP10-10P60014 251 aa5.15□□□□□ -1.58
TPT1-214ENST00000616577 KRTAP12-1P59990 96 aa5.12□□□□□ -1.59
TPT1-214ENST00000616577 CSMD3Q7Z407 3707 aa5.09□□□□□ -1.59
TPT1-214ENST00000616577 KRTAP13-4Q3LI77 160 aa5.08□□□□□ -1.6
TPT1-214ENST00000616577 KRTAP10-6P60371 365 aaPredicted RBP5.06□□□□□ -1.6
TPT1-214ENST00000616577 PRO2289Q9P1D8 64 aa4.96□□□□□ -1.62
TPT1-214ENST00000616577 DNHD1Q96M86 4753 aa4.93□□□□□ -1.62
TPT1-214ENST00000616577 AKAP9Q99996 3911 aa4.9□□□□□ -1.63
TPT1-214ENST00000616577 KRTAP3-2Q9BYR7 98 aa4.89□□□□□ -1.63
TPT1-214ENST00000616577 KRTAP3-3Q9BYR6 98 aa4.88□□□□□ -1.63
TPT1-214ENST00000616577 HUWE1Q7Z6Z7 4374 aaKnown RBP4.86□□□□□ -1.63
TPT1-214ENST00000616577 MT1HL1P0DM35 61 aa4.85□□□□□ -1.63
TPT1-214ENST00000616577 KRTAP10-4P60372 401 aaPredicted RBP4.8□□□□□ -1.64
TPT1-214ENST00000616577 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
TPT1-214ENST00000616577 DNAH9Q9NYC9 4486 aa4.72□□□□□ -1.65
TPT1-214ENST00000616577 KRTAP4-5Q9BYR2 181 aa4.7□□□□□ -1.66
TPT1-214ENST00000616577 PLECQ15149 4684 aaKnown RBP4.68□□□□□ -1.66
TPT1-214ENST00000616577 DNAH11Q96DT5 4516 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms