RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 DMBT1Q9UGM3 2413 aaPredicted RBP8.7□□□□□ -1.02
EPHB4-210ENST00000616502 IGKV2D-30A0A075B6S6 120 aa8.7□□□□□ -1.02
EPHB4-210ENST00000616502 SMR3BP02814 79 aaPredicted RBP8.7□□□□□ -1.02
EPHB4-210ENST00000616502 IGKV2-30P06310 120 aa8.7□□□□□ -1.02
EPHB4-210ENST00000616502 LYSTQ99698 3801 aa8.7□□□□□ -1.02
EPHB4-210ENST00000616502 LINC01558Q9Y6Z2 57 aa8.68□□□□□ -1.02
EPHB4-210ENST00000616502 PRAC1Q96KF2 57 aa8.68□□□□□ -1.02
EPHB4-210ENST00000616502 SPRR1BP22528 89 aa8.67□□□□□ -1.02
EPHB4-210ENST00000616502 PSORS1C2Q9UIG4 136 aa8.67□□□□□ -1.02
EPHB4-210ENST00000616502 A0A087X002 238 aa8.66□□□□□ -1.02
EPHB4-210ENST00000616502 NOTCH2NLQ7Z3S9 236 aa8.66□□□□□ -1.02
EPHB4-210ENST00000616502 DNAH10Q8IVF4 4471 aa8.66□□□□□ -1.02
EPHB4-210ENST00000616502 HUWE1Q7Z6Z7 4374 aaKnown RBP8.65□□□□□ -1.02
EPHB4-210ENST00000616502 DNHD1Q96M86 4753 aa8.63□□□□□ -1.03
EPHB4-210ENST00000616502 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
EPHB4-210ENST00000616502 LINC00313P59037 77 aa8.6□□□□□ -1.03
EPHB4-210ENST00000616502 KRTAP10-2P60368 255 aa8.6□□□□□ -1.03
EPHB4-210ENST00000616502 WWC2-AS2Q96NR7 200 aa8.59□□□□□ -1.03
EPHB4-210ENST00000616502 ZNF861PO60384 105 aa8.59□□□□□ -1.03
EPHB4-210ENST00000616502 SPACA4Q8TDM5 124 aa8.57□□□□□ -1.04
EPHB4-210ENST00000616502 A6NN06 94 aa8.56□□□□□ -1.04
EPHB4-210ENST00000616502 Q5W150 140 aa8.55□□□□□ -1.04
EPHB4-210ENST00000616502 C8orf87E5RJ46 101 aa8.55□□□□□ -1.04
EPHB4-210ENST00000616502 Q6ZR54 194 aa8.54□□□□□ -1.04
EPHB4-210ENST00000616502 MIR22HGQ0VDD5 57 aa8.53□□□□□ -1.04
EPHB4-210ENST00000616502 FAM229AH3BQW9 127 aa8.52□□□□□ -1.05
EPHB4-210ENST00000616502 Q96NJ1 140 aa8.52□□□□□ -1.05
EPHB4-210ENST00000616502 UQCR11O14957 56 aa8.52□□□□□ -1.05
EPHB4-210ENST00000616502 Q6ZRN7 208 aaPredicted RBP8.49□□□□□ -1.05
EPHB4-210ENST00000616502 ADM2Q7Z4H4 148 aa8.48□□□□□ -1.05
EPHB4-210ENST00000616502 PLECQ15149 4684 aaKnown RBP8.47□□□□□ -1.05
EPHB4-210ENST00000616502 PRKDCP78527 4128 aaKnown RBP8.47□□□□□ -1.05
EPHB4-210ENST00000616502 IGLV7-43P04211 117 aa8.44□□□□□ -1.06
EPHB4-210ENST00000616502 DNAH9Q9NYC9 4486 aa8.44□□□□□ -1.06
EPHB4-210ENST00000616502 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
EPHB4-210ENST00000616502 PLA2G1BP04054 148 aaKnown RBP8.43□□□□□ -1.06
EPHB4-210ENST00000616502 KRTAP13-1Q8IUC0 172 aa8.42□□□□□ -1.06
EPHB4-210ENST00000616502 Q8N1X5 172 aa8.42□□□□□ -1.06
EPHB4-210ENST00000616502 SSBP3-AS1Q7Z2R9 100 aa8.39□□□□□ -1.07
EPHB4-210ENST00000616502 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
EPHB4-210ENST00000616502 CMYA5Q8N3K9 4069 aa8.38□□□□□ -1.07
EPHB4-210ENST00000616502 LINC01554Q52M75 96 aa8.37□□□□□ -1.07
EPHB4-210ENST00000616502 DNAH7Q8WXX0 4024 aa8.36□□□□□ -1.07
EPHB4-210ENST00000616502 STARD9Q9P2P6 4700 aa8.36□□□□□ -1.07
EPHB4-210ENST00000616502 DMAC1Q96GE9 116 aa8.34□□□□□ -1.07
EPHB4-210ENST00000616502 CSAG1Q6PB30 78 aa8.34□□□□□ -1.07
EPHB4-210ENST00000616502 TYMSOSQ8TAI1 123 aa8.33□□□□□ -1.08
EPHB4-210ENST00000616502 KMT2AQ03164 3969 aa8.33□□□□□ -1.08
EPHB4-210ENST00000616502 ASB16-AS1Q495Z4 193 aa8.32□□□□□ -1.08
EPHB4-210ENST00000616502 PLAC8Q9NZF1 115 aa8.32□□□□□ -1.08
EPHB4-210ENST00000616502 C9orf92A6NGG3 77 aa8.3□□□□□ -1.08
EPHB4-210ENST00000616502 K7ERS5 55 aa8.27□□□□□ -1.09
EPHB4-210ENST00000616502 SPATA8Q6RVD6 105 aa8.23□□□□□ -1.09
EPHB4-210ENST00000616502 H3BS24 57 aa8.21□□□□□ -1.09
EPHB4-210ENST00000616502 CRIPTQ9P021 101 aa8.2□□□□□ -1.1
EPHB4-210ENST00000616502 DNAH11Q96DT5 4516 aa8.19□□□□□ -1.1
EPHB4-210ENST00000616502 DNAH1Q9P2D7 4330 aa8.16□□□□□ -1.1
EPHB4-210ENST00000616502 KRTAP13-2Q52LG2 175 aa8.11□□□□□ -1.11
EPHB4-210ENST00000616502 LINC00304Q8N9R0 145 aa8.11□□□□□ -1.11
EPHB4-210ENST00000616502 A0A1B0GU33 70 aa8.09□□□□□ -1.11
EPHB4-210ENST00000616502 KRTAP13-3Q3SY46 172 aa8.09□□□□□ -1.11
EPHB4-210ENST00000616502 FRAS1Q86XX4 4008 aa8.09□□□□□ -1.11
EPHB4-210ENST00000616502 DNAH3Q8TD57 4116 aa8.07□□□□□ -1.12
EPHB4-210ENST00000616502 VPS13DQ5THJ4 4388 aa8.05□□□□□ -1.12
EPHB4-210ENST00000616502 A0A0D9SG42 100 aa8.03□□□□□ -1.12
EPHB4-210ENST00000616502 DNAH6Q9C0G6 4158 aa8.01□□□□□ -1.13
EPHB4-210ENST00000616502 FAT1Q14517 4588 aa7.99□□□□□ -1.13
EPHB4-210ENST00000616502 DNAH8Q96JB1 4490 aa7.99□□□□□ -1.13
EPHB4-210ENST00000616502 HYDINQ4G0P3 5121 aa7.98□□□□□ -1.13
EPHB4-210ENST00000616502 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
EPHB4-210ENST00000616502 DNAH2Q9P225 4427 aa7.96□□□□□ -1.14
EPHB4-210ENST00000616502 LRP1BQ9NZR2 4599 aa7.94□□□□□ -1.14
EPHB4-210ENST00000616502 KRTAP16-1A8MUX0 517 aa7.92□□□□□ -1.14
EPHB4-210ENST00000616502 Q6ZSA8 131 aa7.92□□□□□ -1.14
EPHB4-210ENST00000616502 DNAH17Q9UFH2 4485 aa7.92□□□□□ -1.14
EPHB4-210ENST00000616502 H1FX-AS1Q4G0G2 97 aa7.9□□□□□ -1.15
EPHB4-210ENST00000616502 KRTAP1-4P0C5Y4 121 aa7.89□□□□□ -1.15
EPHB4-210ENST00000616502 Q5VSD8 79 aa7.88□□□□□ -1.15
EPHB4-210ENST00000616502 DNAH5Q8TE73 4624 aa7.88□□□□□ -1.15
EPHB4-210ENST00000616502 KRTAP25-1Q3LHN0 102 aa7.88□□□□□ -1.15
EPHB4-210ENST00000616502 H0YAA0 97 aa7.87□□□□□ -1.15
EPHB4-210ENST00000616502 PKHD1P08F94 4074 aa7.84□□□□□ -1.15
EPHB4-210ENST00000616502 A8MUU9 505 aa7.79□□□□□ -1.16
EPHB4-210ENST00000616502 HECTD4Q9Y4D8 3996 aa7.77□□□□□ -1.17
EPHB4-210ENST00000616502 ROMO1P60602 79 aa7.77□□□□□ -1.17
EPHB4-210ENST00000616502 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
EPHB4-210ENST00000616502 MYCBP2O75592 4640 aa7.75□□□□□ -1.17
EPHB4-210ENST00000616502 COX6B2Q6YFQ2 88 aa7.74□□□□□ -1.17
EPHB4-210ENST00000616502 DYNC2H1Q8NCM8 4307 aaKnown RBP7.74□□□□□ -1.17
EPHB4-210ENST00000616502 VPS13BQ7Z7G8 4022 aa7.73□□□□□ -1.17
EPHB4-210ENST00000616502 RPL37P61927 97 aaKnown RBP7.72□□□□□ -1.17
EPHB4-210ENST00000616502 KRTAP21-3Q3LHN1 58 aa7.7□□□□□ -1.18
EPHB4-210ENST00000616502 DYNC1H1Q14204 4646 aaKnown RBP7.7□□□□□ -1.18
EPHB4-210ENST00000616502 J3QL48 77 aa7.67□□□□□ -1.18
EPHB4-210ENST00000616502 KIAA1109Q2LD37 5005 aa7.65□□□□□ -1.19
EPHB4-210ENST00000616502 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.19
EPHB4-210ENST00000616502 LRP1Q07954 4544 aaKnown RBP7.63□□□□□ -1.19
EPHB4-210ENST00000616502 SACSQ9NZJ4 4579 aa7.63□□□□□ -1.19
EPHB4-210ENST00000616502 A0A1B0GVY2 172 aa7.61□□□□□ -1.19
EPHB4-210ENST00000616502 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms