RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 SEC61GP60059 68 aa3.79□□□□□ -1.8
SNX13-213ENST00000611725 Q8N9P0 234 aaPredicted RBP3.79□□□□□ -1.8
SNX13-213ENST00000611725 PRR26Q8N8Z3 221 aa3.78□□□□□ -1.8
SNX13-213ENST00000611725 NBPF19A0A087WUL8 3843 aa3.78□□□□□ -1.81
SNX13-213ENST00000611725 SMR3BP02814 79 aaPredicted RBP3.78□□□□□ -1.81
SNX13-213ENST00000611725 KRTAP10-1P60331 282 aa3.77□□□□□ -1.81
SNX13-213ENST00000611725 LINC00304Q8N9R0 145 aa3.77□□□□□ -1.81
SNX13-213ENST00000611725 Q96NJ1 140 aa3.77□□□□□ -1.81
SNX13-213ENST00000611725 A0A087X002 238 aa3.76□□□□□ -1.81
SNX13-213ENST00000611725 NOTCH2NLQ7Z3S9 236 aa3.76□□□□□ -1.81
SNX13-213ENST00000611725 A0A1B0GU69 56 aa3.75□□□□□ -1.81
SNX13-213ENST00000611725 HRES1P13985 223 aa3.74□□□□□ -1.81
SNX13-213ENST00000611725 ASB16-AS1Q495Z4 193 aa3.74□□□□□ -1.81
SNX13-213ENST00000611725 C7orf65Q6ZTY9 151 aa3.73□□□□□ -1.81
SNX13-213ENST00000611725 Q5W150 140 aa3.72□□□□□ -1.81
SNX13-213ENST00000611725 ATP11AUNQ6ZP68 121 aa3.72□□□□□ -1.81
SNX13-213ENST00000611725 COL7A1Q02388 2944 aa3.71□□□□□ -1.81
SNX13-213ENST00000611725 Q5VV11 94 aa3.71□□□□□ -1.81
SNX13-213ENST00000611725 LINC01558Q9Y6Z2 57 aa3.7□□□□□ -1.82
SNX13-213ENST00000611725 KRTAP13-2Q52LG2 175 aa3.7□□□□□ -1.82
SNX13-213ENST00000611725 Q75L30 129 aa3.69□□□□□ -1.82
SNX13-213ENST00000611725 C9orf92A6NGG3 77 aa3.68□□□□□ -1.82
SNX13-213ENST00000611725 UQCR11O14957 56 aa3.68□□□□□ -1.82
SNX13-213ENST00000611725 CDC42SE1Q9NRR8 79 aa3.67□□□□□ -1.82
SNX13-213ENST00000611725 Q8N1X5 172 aa3.67□□□□□ -1.82
SNX13-213ENST00000611725 Q6ZSA8 131 aa3.67□□□□□ -1.82
SNX13-213ENST00000611725 DMAC1Q96GE9 116 aa3.66□□□□□ -1.82
SNX13-213ENST00000611725 K7ERS5 55 aa3.66□□□□□ -1.82
SNX13-213ENST00000611725 LCA10Q71F78 164 aa3.64□□□□□ -1.83
SNX13-213ENST00000611725 DNHD1Q96M86 4753 aa3.64□□□□□ -1.83
SNX13-213ENST00000611725 VPS13CQ709C8 3753 aa3.64□□□□□ -1.83
SNX13-213ENST00000611725 KRTAP1-4P0C5Y4 121 aa3.63□□□□□ -1.83
SNX13-213ENST00000611725 SPINK7P58062 85 aa3.62□□□□□ -1.83
SNX13-213ENST00000611725 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
SNX13-213ENST00000611725 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
SNX13-213ENST00000611725 ZNF469Q96JG9 3925 aaPredicted RBP3.62□□□□□ -1.83
SNX13-213ENST00000611725 A8MU10 97 aa3.61□□□□□ -1.83
SNX13-213ENST00000611725 KRTAP21-3Q3LHN1 58 aa3.61□□□□□ -1.83
SNX13-213ENST00000611725 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
SNX13-213ENST00000611725 RPS29P62273 56 aaKnown RBP3.58□□□□□ -1.84
SNX13-213ENST00000611725 A6NN06 94 aa3.56□□□□□ -1.84
SNX13-213ENST00000611725 KRTAP16-1A8MUX0 517 aa3.53□□□□□ -1.84
SNX13-213ENST00000611725 RBM12B-AS1Q9P1G2 102 aa3.53□□□□□ -1.84
SNX13-213ENST00000611725 A0A1B0GU33 70 aa3.53□□□□□ -1.85
SNX13-213ENST00000611725 Q5VSD8 79 aa3.52□□□□□ -1.85
SNX13-213ENST00000611725 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
SNX13-213ENST00000611725 COX6B2Q6YFQ2 88 aa3.51□□□□□ -1.85
SNX13-213ENST00000611725 A8MUU9 505 aa3.49□□□□□ -1.85
SNX13-213ENST00000611725 C20orf166-AS1Q96NR2 134 aa3.48□□□□□ -1.85
SNX13-213ENST00000611725 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
SNX13-213ENST00000611725 KIAA1109Q2LD37 5005 aa3.48□□□□□ -1.85
SNX13-213ENST00000611725 PLECQ15149 4684 aaKnown RBP3.47□□□□□ -1.85
SNX13-213ENST00000611725 J3QL48 77 aa3.44□□□□□ -1.86
SNX13-213ENST00000611725 AKAP9Q99996 3911 aa3.44□□□□□ -1.86
SNX13-213ENST00000611725 A0A0D9SG42 100 aa3.44□□□□□ -1.86
SNX13-213ENST00000611725 HUWE1Q7Z6Z7 4374 aaKnown RBP3.43□□□□□ -1.86
SNX13-213ENST00000611725 DNAH5Q8TE73 4624 aa3.43□□□□□ -1.86
SNX13-213ENST00000611725 LINC01554Q52M75 96 aa3.42□□□□□ -1.86
SNX13-213ENST00000611725 A0A1B0GVY2 172 aa3.42□□□□□ -1.86
SNX13-213ENST00000611725 CSAG1Q6PB30 78 aa3.42□□□□□ -1.86
SNX13-213ENST00000611725 H1FX-AS1Q4G0G2 97 aa3.41□□□□□ -1.86
SNX13-213ENST00000611725 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
SNX13-213ENST00000611725 DNAH11Q96DT5 4516 aa3.4□□□□□ -1.86
SNX13-213ENST00000611725 DNAH9Q9NYC9 4486 aa3.4□□□□□ -1.86
SNX13-213ENST00000611725 HYDINQ4G0P3 5121 aa3.39□□□□□ -1.87
SNX13-213ENST00000611725 S4R3F8 94 aa3.39□□□□□ -1.87
SNX13-213ENST00000611725 SPINT4Q6UDR6 99 aa3.38□□□□□ -1.87
SNX13-213ENST00000611725 ADM2Q7Z4H4 148 aa3.38□□□□□ -1.87
SNX13-213ENST00000611725 CSMD3Q7Z407 3707 aa3.37□□□□□ -1.87
SNX13-213ENST00000611725 LRP1BQ9NZR2 4599 aa3.36□□□□□ -1.87
SNX13-213ENST00000611725 XP32Q5T750 250 aa3.36□□□□□ -1.87
SNX13-213ENST00000611725 RYR1P21817 5038 aa3.36□□□□□ -1.87
SNX13-213ENST00000611725 KRTAP10-8P60410 259 aa3.36□□□□□ -1.87
SNX13-213ENST00000611725 DYNC1H1Q14204 4646 aaKnown RBP3.35□□□□□ -1.87
SNX13-213ENST00000611725 CRIPTQ9P021 101 aa3.35□□□□□ -1.87
SNX13-213ENST00000611725 SEC61BP60468 96 aaKnown RBP3.34□□□□□ -1.87
SNX13-213ENST00000611725 STARD9Q9P2P6 4700 aa3.34□□□□□ -1.87
SNX13-213ENST00000611725 FAT1Q14517 4588 aa3.33□□□□□ -1.88
SNX13-213ENST00000611725 KRTAP10-4P60372 401 aaPredicted RBP3.33□□□□□ -1.88
SNX13-213ENST00000611725 KRTAP3-1Q9BYR8 98 aa3.32□□□□□ -1.88
SNX13-213ENST00000611725 H0YAA0 97 aa3.31□□□□□ -1.88
SNX13-213ENST00000611725 VPS13DQ5THJ4 4388 aa3.3□□□□□ -1.88
SNX13-213ENST00000611725 R4GN34 69 aa3.3□□□□□ -1.88
SNX13-213ENST00000611725 DNAH10Q8IVF4 4471 aa3.29□□□□□ -1.88
SNX13-213ENST00000611725 ROMO1P60602 79 aa3.29□□□□□ -1.88
SNX13-213ENST00000611725 DNAH1Q9P2D7 4330 aa3.28□□□□□ -1.88
SNX13-213ENST00000611725 DNAH17Q9UFH2 4485 aa3.27□□□□□ -1.89
SNX13-213ENST00000611725 RYR2Q92736 4967 aa3.27□□□□□ -1.89
SNX13-213ENST00000611725 M0QZ58 72 aa3.27□□□□□ -1.89
SNX13-213ENST00000611725 TPRXLQ17RH7 258 aa3.26□□□□□ -1.89
SNX13-213ENST00000611725 RYR3Q15413 4870 aa3.26□□□□□ -1.89
SNX13-213ENST00000611725 KRTAP25-1Q3LHN0 102 aa3.24□□□□□ -1.89
SNX13-213ENST00000611725 DNAH2Q9P225 4427 aa3.23□□□□□ -1.89
SNX13-213ENST00000611725 P0C880 135 aa3.23□□□□□ -1.89
SNX13-213ENST00000611725 PRKDCP78527 4128 aaKnown RBP3.23□□□□□ -1.89
SNX13-213ENST00000611725 CAMK2N1Q7Z7J9 78 aa3.23□□□□□ -1.89
SNX13-213ENST00000611725 MYCBP2O75592 4640 aa3.22□□□□□ -1.89
SNX13-213ENST00000611725 MT1HL1P0DM35 61 aa3.21□□□□□ -1.9
SNX13-213ENST00000611725 DNAH8Q96JB1 4490 aa3.21□□□□□ -1.9
SNX13-213ENST00000611725 ANK2Q01484 3957 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms