RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 A0A1B0GVX0 72 aa7.05□□□□□ -1.28
SRRT-213ENST00000611405 H0Y9P7 68 aa7.05□□□□□ -1.28
SRRT-213ENST00000611405 C8orf17Q9NRJ1 99 aa7.05□□□□□ -1.28
SRRT-213ENST00000611405 SMIM26A0A096LP01 95 aa7.04□□□□□ -1.28
SRRT-213ENST00000611405 LINC00208Q96KT6 92 aa7.04□□□□□ -1.28
SRRT-213ENST00000611405 TRAV22A0A0B4J277 110 aa7.03□□□□□ -1.28
SRRT-213ENST00000611405 PKD1P98161 4303 aa7.03□□□□□ -1.28
SRRT-213ENST00000611405 IGHV6-1A0A0B4J1U7 121 aa7.02□□□□□ -1.29
SRRT-213ENST00000611405 TP53AIP1Q9HCN2 124 aa7.02□□□□□ -1.29
SRRT-213ENST00000611405 FAT2Q9NYQ8 4349 aa7.02□□□□□ -1.29
SRRT-213ENST00000611405 PLA2G1BP04054 148 aaKnown RBP7□□□□□ -1.29
SRRT-213ENST00000611405 FAM229BQ4G0N7 80 aa7□□□□□ -1.29
SRRT-213ENST00000611405 HYDINQ4G0P3 5121 aa6.99□□□□□ -1.29
SRRT-213ENST00000611405 CYP4F30PQ9H0H9 118 aa6.99□□□□□ -1.29
SRRT-213ENST00000611405 C1orf64Q8NEQ6 169 aa6.99□□□□□ -1.29
SRRT-213ENST00000611405 Q75L30 129 aa6.98□□□□□ -1.29
SRRT-213ENST00000611405 MRPL34Q9BQ48 92 aaKnown RBP6.97□□□□□ -1.29
SRRT-213ENST00000611405 FP248Q71RG6 208 aaPredicted RBP6.97□□□□□ -1.29
SRRT-213ENST00000611405 SPINK6Q6UWN8 80 aa6.96□□□□□ -1.3
SRRT-213ENST00000611405 SPANXA2-OT1Q8N9U9 137 aa6.96□□□□□ -1.3
SRRT-213ENST00000611405 A0A087X002 238 aa6.95□□□□□ -1.3
SRRT-213ENST00000611405 KRTAP13-2Q52LG2 175 aa6.95□□□□□ -1.3
SRRT-213ENST00000611405 LRP1BQ9NZR2 4599 aa6.95□□□□□ -1.3
SRRT-213ENST00000611405 NDUFS5O43920 106 aa6.94□□□□□ -1.3
SRRT-213ENST00000611405 NOTCH2NLQ7Z3S9 236 aa6.94□□□□□ -1.3
SRRT-213ENST00000611405 PRR4Q16378 134 aa6.92□□□□□ -1.3
SRRT-213ENST00000611405 KRTAP1-4P0C5Y4 121 aa6.92□□□□□ -1.3
SRRT-213ENST00000611405 SACSQ9NZJ4 4579 aa6.88□□□□□ -1.31
SRRT-213ENST00000611405 KTN1-AS1Q86SY8 53 aa6.88□□□□□ -1.31
SRRT-213ENST00000611405 LIMD2Q9BT23 127 aa6.87□□□□□ -1.31
SRRT-213ENST00000611405 VPS13BQ7Z7G8 4022 aa6.87□□□□□ -1.31
SRRT-213ENST00000611405 IGLV7-46A0A075B6I9 117 aa6.87□□□□□ -1.31
SRRT-213ENST00000611405 MPLKIPQ8TAP9 179 aa6.86□□□□□ -1.31
SRRT-213ENST00000611405 LINC00313P59037 77 aa6.85□□□□□ -1.31
SRRT-213ENST00000611405 PCOTHQ58A44 107 aa6.84□□□□□ -1.31
SRRT-213ENST00000611405 TYMSOSQ8TAI1 123 aa6.84□□□□□ -1.31
SRRT-213ENST00000611405 LOC101927531A0A1B0GV80 90 aa6.83□□□□□ -1.32
SRRT-213ENST00000611405 Q1T7F1 81 aa6.82□□□□□ -1.32
SRRT-213ENST00000611405 KRTAP13-3Q3SY46 172 aa6.82□□□□□ -1.32
SRRT-213ENST00000611405 A8MUN3 132 aa6.81□□□□□ -1.32
SRRT-213ENST00000611405 SPINK1P00995 79 aa6.81□□□□□ -1.32
SRRT-213ENST00000611405 Q5W150 140 aa6.81□□□□□ -1.32
SRRT-213ENST00000611405 A0A1B0GVY2 172 aa6.8□□□□□ -1.32
SRRT-213ENST00000611405 Q8N9P0 234 aaPredicted RBP6.8□□□□□ -1.32
SRRT-213ENST00000611405 DYNC1H1Q14204 4646 aaKnown RBP6.78□□□□□ -1.32
SRRT-213ENST00000611405 PKHD1P08F94 4074 aa6.78□□□□□ -1.32
SRRT-213ENST00000611405 FAM229AH3BQW9 127 aa6.78□□□□□ -1.32
SRRT-213ENST00000611405 COA5Q86WW8 74 aa6.77□□□□□ -1.33
SRRT-213ENST00000611405 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
SRRT-213ENST00000611405 RPS29P62273 56 aaKnown RBP6.76□□□□□ -1.33
SRRT-213ENST00000611405 SPAG11AQ6PDA7 123 aa6.75□□□□□ -1.33
SRRT-213ENST00000611405 LINC00304Q8N9R0 145 aa6.75□□□□□ -1.33
SRRT-213ENST00000611405 SMR3BP02814 79 aaPredicted RBP6.75□□□□□ -1.33
SRRT-213ENST00000611405 KRTAP10-4P60372 401 aaPredicted RBP6.7□□□□□ -1.34
SRRT-213ENST00000611405 RYR2Q92736 4967 aa6.7□□□□□ -1.34
SRRT-213ENST00000611405 APOBP04114 4563 aaKnown RBP6.7□□□□□ -1.34
SRRT-213ENST00000611405 LCA10Q71F78 164 aa6.7□□□□□ -1.34
SRRT-213ENST00000611405 IGKV2-30P06310 120 aa6.69□□□□□ -1.34
SRRT-213ENST00000611405 RETNLBQ9BQ08 111 aa6.69□□□□□ -1.34
SRRT-213ENST00000611405 HRES1P13985 223 aa6.69□□□□□ -1.34
SRRT-213ENST00000611405 PSPHP1O15172 72 aa6.68□□□□□ -1.34
SRRT-213ENST00000611405 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
SRRT-213ENST00000611405 ACYP2P14621 99 aa6.64□□□□□ -1.35
SRRT-213ENST00000611405 PKHD1L1Q86WI1 4243 aa6.64□□□□□ -1.35
SRRT-213ENST00000611405 DMAC1Q96GE9 116 aa6.63□□□□□ -1.35
SRRT-213ENST00000611405 FAT1Q14517 4588 aa6.62□□□□□ -1.35
SRRT-213ENST00000611405 Q5VV11 94 aa6.62□□□□□ -1.35
SRRT-213ENST00000611405 PRR15LQ9BU68 103 aa6.62□□□□□ -1.35
SRRT-213ENST00000611405 LINC01558Q9Y6Z2 57 aa6.6□□□□□ -1.35
SRRT-213ENST00000611405 IGKV2D-30A0A075B6S6 120 aa6.6□□□□□ -1.35
SRRT-213ENST00000611405 CHKB-CPT1BH3BT56 60 aa6.56□□□□□ -1.36
SRRT-213ENST00000611405 LINC01554Q52M75 96 aa6.56□□□□□ -1.36
SRRT-213ENST00000611405 KMT2CQ8NEZ4 4911 aaKnown RBP6.56□□□□□ -1.36
SRRT-213ENST00000611405 C7orf65Q6ZTY9 151 aa6.55□□□□□ -1.36
SRRT-213ENST00000611405 A8MUU9 505 aa6.53□□□□□ -1.36
SRRT-213ENST00000611405 C20orf166-AS1Q96NR2 134 aa6.53□□□□□ -1.36
SRRT-213ENST00000611405 C9orf92A6NGG3 77 aa6.52□□□□□ -1.37
SRRT-213ENST00000611405 A6NED7 52 aa6.48□□□□□ -1.37
SRRT-213ENST00000611405 Q5VSD8 79 aa6.47□□□□□ -1.37
SRRT-213ENST00000611405 KRTAP10-8P60410 259 aa6.47□□□□□ -1.37
SRRT-213ENST00000611405 Q8N1X5 172 aa6.46□□□□□ -1.38
SRRT-213ENST00000611405 A6NN06 94 aa6.45□□□□□ -1.38
SRRT-213ENST00000611405 HSPG2P98160 4391 aa6.44□□□□□ -1.38
SRRT-213ENST00000611405 TNXBP22105 4242 aa6.42□□□□□ -1.38
SRRT-213ENST00000611405 FLG2Q5D862 2391 aaPredicted RBP6.42□□□□□ -1.38
SRRT-213ENST00000611405 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
SRRT-213ENST00000611405 A8MU10 97 aa6.41□□□□□ -1.38
SRRT-213ENST00000611405 RYR1P21817 5038 aa6.4□□□□□ -1.38
SRRT-213ENST00000611405 ATP11AUNQ6ZP68 121 aa6.4□□□□□ -1.39
SRRT-213ENST00000611405 SPINK7P58062 85 aa6.39□□□□□ -1.39
SRRT-213ENST00000611405 FAT3Q8TDW7 4589 aa6.39□□□□□ -1.39
SRRT-213ENST00000611405 A0A1B0GU69 56 aa6.39□□□□□ -1.39
SRRT-213ENST00000611405 RYR3Q15413 4870 aa6.38□□□□□ -1.39
SRRT-213ENST00000611405 LRP1Q07954 4544 aaKnown RBP6.36□□□□□ -1.39
SRRT-213ENST00000611405 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
SRRT-213ENST00000611405 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
SRRT-213ENST00000611405 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
SRRT-213ENST00000611405 RPL37P61927 97 aaKnown RBP6.29□□□□□ -1.4
SRRT-213ENST00000611405 MT1HL1P0DM35 61 aa6.28□□□□□ -1.4
SRRT-213ENST00000611405 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms