RNA–Protein interactions for RNA: ENST00000606347.1

UCHL3-204, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-204ENST00000606347 CEP290O15078 2479 aa0.33□□□□□ -2.36
UCHL3-204ENST00000606347 PKD1L1Q8TDX9 2849 aa0.33□□□□□ -2.36
UCHL3-204ENST00000606347 LYSTQ99698 3801 aa0.33□□□□□ -2.36
UCHL3-204ENST00000606347 MROH2BQ7Z745 1585 aa0.33□□□□□ -2.36
UCHL3-204ENST00000606347 ARHGAP5-AS1Q96IT6 56 aa0.33□□□□□ -2.36
UCHL3-204ENST00000606347 TTTY10Q9BZA0 68 aa0.33□□□□□ -2.36
UCHL3-204ENST00000606347 TOMM7Q9P0U1 55 aa0.33□□□□□ -2.36
UCHL3-204ENST00000606347 MAP1BP46821 2468 aaKnown RBP0.33□□□□□ -2.36
UCHL3-204ENST00000606347 WNK1Q9H4A3 2382 aa0.33□□□□□ -2.36
UCHL3-204ENST00000606347 LRP1Q07954 4544 aaKnown RBP0.33□□□□□ -2.36
UCHL3-204ENST00000606347 PHGR1C9JFL3 82 aa0.32□□□□□ -2.36
UCHL3-204ENST00000606347 H3BSH0 61 aa0.32□□□□□ -2.36
UCHL3-204ENST00000606347 DMBT1Q9UGM3 2413 aaPredicted RBP0.32□□□□□ -2.36
UCHL3-204ENST00000606347 KMT2DO14686 5537 aa0.31□□□□□ -2.36
UCHL3-204ENST00000606347 TNRC18O15417 2968 aaPredicted RBP0.31□□□□□ -2.36
UCHL3-204ENST00000606347 APC2O95996 2303 aa0.31□□□□□ -2.36
UCHL3-204ENST00000606347 UBR5O95071 2799 aaPredicted RBP0.31□□□□□ -2.36
UCHL3-204ENST00000606347 HUWE1Q7Z6Z7 4374 aaKnown RBP0.31□□□□□ -2.36
UCHL3-204ENST00000606347 AKAP13Q12802 2813 aa0.31□□□□□ -2.36
UCHL3-204ENST00000606347 DEFB110Q30KQ9 67 aa0.31□□□□□ -2.36
UCHL3-204ENST00000606347 ACANP16112 2415 aa0.3□□□□□ -2.36
UCHL3-204ENST00000606347 HIVEP3Q5T1R4 2406 aa0.29□□□□□ -2.36
UCHL3-204ENST00000606347 ACACAQ13085 2346 aa0.29□□□□□ -2.36
UCHL3-204ENST00000606347 M0QZ58 72 aa0.29□□□□□ -2.36
UCHL3-204ENST00000606347 PTPN13Q12923 2485 aa0.29□□□□□ -2.36
UCHL3-204ENST00000606347 MYCBP2O75592 4640 aa0.29□□□□□ -2.36
UCHL3-204ENST00000606347 KMT2AQ03164 3969 aa0.29□□□□□ -2.36
UCHL3-204ENST00000606347 GCC2Q8IWJ2 1684 aa0.28□□□□□ -2.36
UCHL3-204ENST00000606347 C9orf92A6NGG3 77 aa0.28□□□□□ -2.36
UCHL3-204ENST00000606347 TNP1P09430 55 aa0.28□□□□□ -2.36
UCHL3-204ENST00000606347 NCOR2Q9Y618 2525 aa0.28□□□□□ -2.36
UCHL3-204ENST00000606347 PDZD2O15018 2839 aa0.28□□□□□ -2.37
UCHL3-204ENST00000606347 HRNRQ86YZ3 2850 aaPredicted RBP0.27□□□□□ -2.37
UCHL3-204ENST00000606347 SRRM2Q9UQ35 2752 aaKnown RBP0.27□□□□□ -2.37
UCHL3-204ENST00000606347 VPS13BQ7Z7G8 4022 aa0.27□□□□□ -2.37
UCHL3-204ENST00000606347 COL6A5A8TX70 2615 aa0.27□□□□□ -2.37
UCHL3-204ENST00000606347 SPART-AS1P0CW21 52 aa0.26□□□□□ -2.37
UCHL3-204ENST00000606347 SPRR2DP22532 72 aa0.26□□□□□ -2.37
UCHL3-204ENST00000606347 STAB1Q9NY15 2570 aa0.26□□□□□ -2.37
UCHL3-204ENST00000606347 MAST4O15021 2626 aa0.26□□□□□ -2.37
UCHL3-204ENST00000606347 SETXQ7Z333 2677 aaKnown RBP0.25□□□□□ -2.37
UCHL3-204ENST00000606347 KRTAP6-2Q3LI66 62 aa0.25□□□□□ -2.37
UCHL3-204ENST00000606347 MTORP42345 2549 aa0.25□□□□□ -2.37
UCHL3-204ENST00000606347 ZZEF1O43149 2961 aa0.24□□□□□ -2.37
UCHL3-204ENST00000606347 NSD1Q96L73 2696 aaPredicted RBP0.24□□□□□ -2.37
UCHL3-204ENST00000606347 IGSF10Q6WRI0 2623 aa0.24□□□□□ -2.37
UCHL3-204ENST00000606347 SPTBN4Q9H254 2564 aa0.24□□□□□ -2.37
UCHL3-204ENST00000606347 SONP18583 2426 aaKnown RBP0.24□□□□□ -2.37
UCHL3-204ENST00000606347 CACNA1AO00555 2505 aa0.24□□□□□ -2.37
UCHL3-204ENST00000606347 GCN1Q92616 2671 aaKnown RBP0.23□□□□□ -2.37
UCHL3-204ENST00000606347 RIF1Q5UIP0 2472 aaKnown RBP0.23□□□□□ -2.37
UCHL3-204ENST00000606347 CCDC168Q8NDH2 2452 aa0.23□□□□□ -2.37
UCHL3-204ENST00000606347 SPG11Q96JI7 2443 aa0.23□□□□□ -2.37
UCHL3-204ENST00000606347 HECTD4Q9Y4D8 3996 aa0.23□□□□□ -2.37
UCHL3-204ENST00000606347 LINC01590Q5TEZ4 76 aa0.23□□□□□ -2.37
UCHL3-204ENST00000606347 FLNCQ14315 2725 aa0.23□□□□□ -2.37
UCHL3-204ENST00000606347 SPENQ96T58 3664 aaKnown RBP0.23□□□□□ -2.37
UCHL3-204ENST00000606347 A0A0C4DFX4 3053 aa0.23□□□□□ -2.37
UCHL3-204ENST00000606347 COL7A1Q02388 2944 aa0.23□□□□□ -2.37
UCHL3-204ENST00000606347 LPAP08519 4548 aa0.22□□□□□ -2.37
UCHL3-204ENST00000606347 DCHS2Q6V1P9 2916 aa0.22□□□□□ -2.37
UCHL3-204ENST00000606347 LRRK2Q5S007 2527 aa0.22□□□□□ -2.37
UCHL3-204ENST00000606347 CUBNO60494 3623 aa0.22□□□□□ -2.37
UCHL3-204ENST00000606347 NF1P21359 2839 aa0.22□□□□□ -2.37
UCHL3-204ENST00000606347 SPRR2BP35325 72 aa0.22□□□□□ -2.37
UCHL3-204ENST00000606347 PRCDQ00LT1 54 aa0.22□□□□□ -2.37
UCHL3-204ENST00000606347 DMXL1Q9Y485 3027 aa0.22□□□□□ -2.37
UCHL3-204ENST00000606347 ANKHD1Q8IWZ3 2542 aaKnown RBP0.22□□□□□ -2.37
UCHL3-204ENST00000606347 SETD2Q9BYW2 2564 aaPredicted RBP0.21□□□□□ -2.38
UCHL3-204ENST00000606347 FASNP49327 2511 aaKnown RBP0.21□□□□□ -2.38
UCHL3-204ENST00000606347 FLNBO75369 2602 aaKnown RBP0.21□□□□□ -2.38
UCHL3-204ENST00000606347 HMCN2Q8NDA2 5059 aa0.21□□□□□ -2.38
UCHL3-204ENST00000606347 GPR98Q8WXG9 6306 aa0.21□□□□□ -2.38
UCHL3-204ENST00000606347 FAM186AA6NE01 2351 aa0.2□□□□□ -2.38
UCHL3-204ENST00000606347 SACSQ9NZJ4 4579 aa0.2□□□□□ -2.38
UCHL3-204ENST00000606347 A0A096LNI7 61 aa0.2□□□□□ -2.38
UCHL3-204ENST00000606347 TENM2Q9NT68 2774 aa0.2□□□□□ -2.38
UCHL3-204ENST00000606347 ACACBO00763 2458 aa0.2□□□□□ -2.38
UCHL3-204ENST00000606347 HSPG2P98160 4391 aa0.2□□□□□ -2.38
UCHL3-204ENST00000606347 PKD1P98161 4303 aa0.19□□□□□ -2.38
UCHL3-204ENST00000606347 SVEP1Q4LDE5 3571 aa0.19□□□□□ -2.38
UCHL3-204ENST00000606347 SMR3BP02814 79 aaPredicted RBP0.18□□□□□ -2.38
UCHL3-204ENST00000606347 KRTAP8-1Q8IUC2 63 aa0.18□□□□□ -2.38
UCHL3-204ENST00000606347 CHD7Q9P2D1 2997 aa0.18□□□□□ -2.38
UCHL3-204ENST00000606347 UTP20O75691 2785 aaKnown RBP0.18□□□□□ -2.38
UCHL3-204ENST00000606347 NBEAL2Q6ZNJ1 2754 aa0.18□□□□□ -2.38
UCHL3-204ENST00000606347 MYO18BQ8IUG5 2567 aa0.18□□□□□ -2.38
UCHL3-204ENST00000606347 SYNE2Q8WXH0 6885 aaKnown RBP0.18□□□□□ -2.38
UCHL3-204ENST00000606347 DNAH11Q96DT5 4516 aa0.17□□□□□ -2.38
UCHL3-204ENST00000606347 COL12A1Q99715 3063 aa0.17□□□□□ -2.38
UCHL3-204ENST00000606347 LRP1BQ9NZR2 4599 aa0.17□□□□□ -2.38
UCHL3-204ENST00000606347 K7EIM0 57 aa0.17□□□□□ -2.38
UCHL3-204ENST00000606347 MT1AP04731 61 aa0.17□□□□□ -2.38
UCHL3-204ENST00000606347 SPRR2AP35326 72 aa0.17□□□□□ -2.38
UCHL3-204ENST00000606347 PKHD1L1Q86WI1 4243 aa0.17□□□□□ -2.38
UCHL3-204ENST00000606347 MAP1AP78559 2803 aaPredicted RBP0.17□□□□□ -2.38
UCHL3-204ENST00000606347 DNAH3Q8TD57 4116 aa0.17□□□□□ -2.38
UCHL3-204ENST00000606347 EPG5Q9HCE0 2579 aa0.16□□□□□ -2.38
UCHL3-204ENST00000606347 TACC2O95359 2948 aa0.16□□□□□ -2.38
UCHL3-204ENST00000606347 COL6A3P12111 3177 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms