RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 LRP1Q07954 4544 aaKnown RBP10.98□□□□□ -0.65
TUBB4B-202ENST00000604929 LIMD2Q9BT23 127 aa10.98□□□□□ -0.65
TUBB4B-202ENST00000604929 OCR1Q9BZK8 76 aa10.98□□□□□ -0.65
TUBB4B-202ENST00000604929 KRTAP29-1A8MX34 341 aaPredicted RBP10.97□□□□□ -0.65
TUBB4B-202ENST00000604929 NOTCH2NLQ7Z3S9 236 aa10.97□□□□□ -0.65
TUBB4B-202ENST00000604929 MMP24-AS1A0A0U1RRL7 71 aa10.97□□□□□ -0.65
TUBB4B-202ENST00000604929 PKHD1L1Q86WI1 4243 aa10.96□□□□□ -0.65
TUBB4B-202ENST00000604929 C8orf17Q9NRJ1 99 aa10.95□□□□□ -0.66
TUBB4B-202ENST00000604929 hDV103S1A0JD37 113 aa10.94□□□□□ -0.66
TUBB4B-202ENST00000604929 SPAG11AQ6PDA7 123 aa10.92□□□□□ -0.66
TUBB4B-202ENST00000604929 C20orf197Q8N268 126 aa10.92□□□□□ -0.66
TUBB4B-202ENST00000604929 Q8N1X5 172 aa10.9□□□□□ -0.66
TUBB4B-202ENST00000604929 CYSTM1Q9H1C7 97 aa10.89□□□□□ -0.67
TUBB4B-202ENST00000604929 FLG2Q5D862 2391 aaPredicted RBP10.89□□□□□ -0.67
TUBB4B-202ENST00000604929 SVIPQ8NHG7 77 aa10.86□□□□□ -0.67
TUBB4B-202ENST00000604929 SNURFQ9Y675 71 aa10.86□□□□□ -0.67
TUBB4B-202ENST00000604929 RPS29P62273 56 aaKnown RBP10.85□□□□□ -0.67
TUBB4B-202ENST00000604929 TNXBP22105 4242 aa10.84□□□□□ -0.67
TUBB4B-202ENST00000604929 LINC00313P59037 77 aa10.82□□□□□ -0.68
TUBB4B-202ENST00000604929 MYCBP2O75592 4640 aa10.82□□□□□ -0.68
TUBB4B-202ENST00000604929 NDUFS5O43920 106 aa10.82□□□□□ -0.68
TUBB4B-202ENST00000604929 KRTAP10-8P60410 259 aa10.82□□□□□ -0.68
TUBB4B-202ENST00000604929 TMEM254Q8TBM7 123 aa10.82□□□□□ -0.68
TUBB4B-202ENST00000604929 MRPL34Q9BQ48 92 aaKnown RBP10.82□□□□□ -0.68
TUBB4B-202ENST00000604929 FAT3Q8TDW7 4589 aa10.8□□□□□ -0.68
TUBB4B-202ENST00000604929 RETNLBQ9BQ08 111 aa10.79□□□□□ -0.68
TUBB4B-202ENST00000604929 C8orf87E5RJ46 101 aa10.78□□□□□ -0.68
TUBB4B-202ENST00000604929 C5orf47Q569G3 176 aa10.77□□□□□ -0.69
TUBB4B-202ENST00000604929 KLKP1Q107X0 134 aa10.76□□□□□ -0.69
TUBB4B-202ENST00000604929 KRTAP4-5Q9BYR2 181 aa10.75□□□□□ -0.69
TUBB4B-202ENST00000604929 A0A0U1RQV1 116 aa10.74□□□□□ -0.69
TUBB4B-202ENST00000604929 DMBT1Q9UGM3 2413 aaPredicted RBP10.73□□□□□ -0.69
TUBB4B-202ENST00000604929 H0Y9P7 68 aa10.7□□□□□ -0.7
TUBB4B-202ENST00000604929 TP53AIP1Q9HCN2 124 aa10.7□□□□□ -0.7
TUBB4B-202ENST00000604929 MP68P56378 58 aa10.7□□□□□ -0.7
TUBB4B-202ENST00000604929 LINC00208Q96KT6 92 aa10.68□□□□□ -0.7
TUBB4B-202ENST00000604929 KRTAP16-1A8MUX0 517 aa10.67□□□□□ -0.7
TUBB4B-202ENST00000604929 H7BZZ5 65 aa10.67□□□□□ -0.7
TUBB4B-202ENST00000604929 TRAV22A0A0B4J277 110 aa10.67□□□□□ -0.7
TUBB4B-202ENST00000604929 MT1HL1P0DM35 61 aa10.66□□□□□ -0.7
TUBB4B-202ENST00000604929 C9orf92A6NGG3 77 aa10.65□□□□□ -0.71
TUBB4B-202ENST00000604929 Q8N9P0 234 aaPredicted RBP10.63□□□□□ -0.71
TUBB4B-202ENST00000604929 Q5W150 140 aa10.63□□□□□ -0.71
TUBB4B-202ENST00000604929 ZCCHC13Q8WW36 166 aaKnown RBP10.63□□□□□ -0.71
TUBB4B-202ENST00000604929 C1orf64Q8NEQ6 169 aa10.62□□□□□ -0.71
TUBB4B-202ENST00000604929 NDUFC1O43677 76 aa10.6□□□□□ -0.71
TUBB4B-202ENST00000604929 TMEM258P61165 79 aa10.58□□□□□ -0.72
TUBB4B-202ENST00000604929 BIRC6Q9NR09 4857 aa10.57□□□□□ -0.72
TUBB4B-202ENST00000604929 ABCA13Q86UQ4 5058 aa10.56□□□□□ -0.72
TUBB4B-202ENST00000604929 H3BPC8 53 aa10.55□□□□□ -0.72
TUBB4B-202ENST00000604929 OXTP01178 125 aa10.53□□□□□ -0.72
TUBB4B-202ENST00000604929 KRTAP13-3Q3SY46 172 aa10.52□□□□□ -0.73
TUBB4B-202ENST00000604929 FAM236DA0A1B0GTK5 79 aa10.5□□□□□ -0.73
TUBB4B-202ENST00000604929 FAM236CP0DP71 79 aa10.5□□□□□ -0.73
TUBB4B-202ENST00000604929 PCOTHQ58A44 107 aa10.48□□□□□ -0.73
TUBB4B-202ENST00000604929 HERC2O95714 4834 aa10.47□□□□□ -0.73
TUBB4B-202ENST00000604929 IGLV7-46A0A075B6I9 117 aa10.45□□□□□ -0.74
TUBB4B-202ENST00000604929 PRR4Q16378 134 aa10.45□□□□□ -0.74
TUBB4B-202ENST00000604929 FP248Q71RG6 208 aaPredicted RBP10.45□□□□□ -0.74
TUBB4B-202ENST00000604929 LOC101927531A0A1B0GV80 90 aa10.42□□□□□ -0.74
TUBB4B-202ENST00000604929 C20orf166-AS1Q96NR2 134 aa10.41□□□□□ -0.74
TUBB4B-202ENST00000604929 A8MUU9 505 aa10.41□□□□□ -0.74
TUBB4B-202ENST00000604929 CYP4F30PQ9H0H9 118 aa10.4□□□□□ -0.74
TUBB4B-202ENST00000604929 IGKV2D-30A0A075B6S6 120 aa10.36□□□□□ -0.75
TUBB4B-202ENST00000604929 IGKV2-30P06310 120 aa10.36□□□□□ -0.75
TUBB4B-202ENST00000604929 J3QL48 77 aa10.34□□□□□ -0.75
TUBB4B-202ENST00000604929 ATP5EP56381 51 aaPredicted RBP10.34□□□□□ -0.75
TUBB4B-202ENST00000604929 Q75L30 129 aa10.31□□□□□ -0.76
TUBB4B-202ENST00000604929 SPANXA2-OT1Q8N9U9 137 aa10.3□□□□□ -0.76
TUBB4B-202ENST00000604929 XP32Q5T750 250 aa10.28□□□□□ -0.76
TUBB4B-202ENST00000604929 RPS28P62857 69 aaKnown RBP10.27□□□□□ -0.77
TUBB4B-202ENST00000604929 SERP1Q9Y6X1 66 aa10.27□□□□□ -0.77
TUBB4B-202ENST00000604929 HRES1P13985 223 aa10.26□□□□□ -0.77
TUBB4B-202ENST00000604929 LPAP08519 4548 aa10.25□□□□□ -0.77
TUBB4B-202ENST00000604929 ATP11AUNQ6ZP68 121 aa10.23□□□□□ -0.77
TUBB4B-202ENST00000604929 C7orf65Q6ZTY9 151 aa10.21□□□□□ -0.77
TUBB4B-202ENST00000604929 RPL37P61927 97 aaKnown RBP10.21□□□□□ -0.78
TUBB4B-202ENST00000604929 PCLOQ9Y6V0 5065 aa10.19□□□□□ -0.78
TUBB4B-202ENST00000604929 LRP2P98164 4655 aa10.18□□□□□ -0.78
TUBB4B-202ENST00000604929 TPRXLQ17RH7 258 aa10.17□□□□□ -0.78
TUBB4B-202ENST00000604929 SPINK7P58062 85 aa10.17□□□□□ -0.78
TUBB4B-202ENST00000604929 C4orf26Q17RF5 130 aa10.11□□□□□ -0.79
TUBB4B-202ENST00000604929 COA5Q86WW8 74 aa10.08□□□□□ -0.8
TUBB4B-202ENST00000604929 DMAC1Q96GE9 116 aa10.06□□□□□ -0.8
TUBB4B-202ENST00000604929 ACYP2P14621 99 aa10.04□□□□□ -0.8
TUBB4B-202ENST00000604929 SMIM26A0A096LP01 95 aa10.02□□□□□ -0.8
TUBB4B-202ENST00000604929 HERC1Q15751 4861 aa10.02□□□□□ -0.81
TUBB4B-202ENST00000604929 MPLKIPQ8TAP9 179 aa9.97□□□□□ -0.81
TUBB4B-202ENST00000604929 KRTAP3-1Q9BYR8 98 aa9.94□□□□□ -0.82
TUBB4B-202ENST00000604929 CHKB-CPT1BH3BT56 60 aa9.92□□□□□ -0.82
TUBB4B-202ENST00000604929 A8MUN3 132 aa9.87□□□□□ -0.83
TUBB4B-202ENST00000604929 COX6B2Q6YFQ2 88 aa9.87□□□□□ -0.83
TUBB4B-202ENST00000604929 SEC61BP60468 96 aaKnown RBP9.83□□□□□ -0.84
TUBB4B-202ENST00000604929 Q1T7F1 81 aa9.8□□□□□ -0.84
TUBB4B-202ENST00000604929 HMCN2Q8NDA2 5059 aa9.8□□□□□ -0.84
TUBB4B-202ENST00000604929 PSPHP1O15172 72 aa9.75□□□□□ -0.85
TUBB4B-202ENST00000604929 KRTAP4-1Q9BYQ7 146 aa9.72□□□□□ -0.85
TUBB4B-202ENST00000604929 V9GYY9 64 aa9.72□□□□□ -0.85
TUBB4B-202ENST00000604929 MUC2Q02817 5179 aa9.71□□□□□ -0.86
TUBB4B-202ENST00000604929 MUC17Q685J3 4493 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms