RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 APCP25054 2843 aa8.29□□□□□ -1.08
SYMPK-215ENST00000600237 TNRC18O15417 2968 aaPredicted RBP8.28□□□□□ -1.08
SYMPK-215ENST00000600237 VCANP13611 3396 aa8.27□□□□□ -1.08
SYMPK-215ENST00000600237 BOD1L1Q8NFC6 3051 aa8.27□□□□□ -1.09
SYMPK-215ENST00000600237 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
SYMPK-215ENST00000600237 ASH1LQ9NR48 2969 aaKnown RBP8.26□□□□□ -1.09
SYMPK-215ENST00000600237 COL6A3P12111 3177 aa8.25□□□□□ -1.09
SYMPK-215ENST00000600237 A6NN06 94 aa8.23□□□□□ -1.09
SYMPK-215ENST00000600237 EYSQ5T1H1 3165 aa8.23□□□□□ -1.09
SYMPK-215ENST00000600237 LRBAP50851 2863 aa8.21□□□□□ -1.09
SYMPK-215ENST00000600237 ZZEF1O43149 2961 aa8.2□□□□□ -1.1
SYMPK-215ENST00000600237 KRTAP13-2Q52LG2 175 aa8.2□□□□□ -1.1
SYMPK-215ENST00000600237 CELSR2Q9HCU4 2923 aa8.13□□□□□ -1.11
SYMPK-215ENST00000600237 KRTAP25-1Q3LHN0 102 aa8.12□□□□□ -1.11
SYMPK-215ENST00000600237 CRYBG3Q68DQ2 2970 aa8.1□□□□□ -1.11
SYMPK-215ENST00000600237 PLAC4Q8WY50 150 aa8.1□□□□□ -1.11
SYMPK-215ENST00000600237 DNAH14Q0VDD8 3507 aa8.09□□□□□ -1.11
SYMPK-215ENST00000600237 A8MU10 97 aa8.09□□□□□ -1.11
SYMPK-215ENST00000600237 ZANQ9Y493 2812 aa8.07□□□□□ -1.12
SYMPK-215ENST00000600237 DMXL1Q9Y485 3027 aa8.06□□□□□ -1.12
SYMPK-215ENST00000600237 A8MUU9 505 aa8.04□□□□□ -1.12
SYMPK-215ENST00000600237 DCHS2Q6V1P9 2916 aa8.02□□□□□ -1.13
SYMPK-215ENST00000600237 C20orf166-AS1Q96NR2 134 aa7.97□□□□□ -1.13
SYMPK-215ENST00000600237 SPTBN5Q9NRC6 3674 aaKnown RBP7.96□□□□□ -1.14
SYMPK-215ENST00000600237 CFAP47Q6ZTR5 3102 aa7.96□□□□□ -1.14
SYMPK-215ENST00000600237 USP34Q70CQ2 3546 aa7.93□□□□□ -1.14
SYMPK-215ENST00000600237 HRNRQ86YZ3 2850 aaPredicted RBP7.92□□□□□ -1.14
SYMPK-215ENST00000600237 KRTAP16-1A8MUX0 517 aa7.9□□□□□ -1.14
SYMPK-215ENST00000600237 TENM3Q9P273 2699 aa7.89□□□□□ -1.15
SYMPK-215ENST00000600237 NF1P21359 2839 aa7.86□□□□□ -1.15
SYMPK-215ENST00000600237 KRTAP1-4P0C5Y4 121 aa7.83□□□□□ -1.16
SYMPK-215ENST00000600237 SPEGQ15772 3267 aa7.8□□□□□ -1.16
SYMPK-215ENST00000600237 FBN2P35556 2912 aa7.8□□□□□ -1.16
SYMPK-215ENST00000600237 NDUFAF8A1L188 74 aa7.79□□□□□ -1.16
SYMPK-215ENST00000600237 TNP1P09430 55 aa7.78□□□□□ -1.16
SYMPK-215ENST00000600237 LOC400499M0QZD8 3231 aa7.77□□□□□ -1.17
SYMPK-215ENST00000600237 TENM1Q9UKZ4 2725 aa7.73□□□□□ -1.17
SYMPK-215ENST00000600237 MXRA5Q9NR99 2828 aa7.72□□□□□ -1.17
SYMPK-215ENST00000600237 XP32Q5T750 250 aa7.7□□□□□ -1.18
SYMPK-215ENST00000600237 TENM2Q9NT68 2774 aa7.68□□□□□ -1.18
SYMPK-215ENST00000600237 PP632Q6XCG6 107 aa7.68□□□□□ -1.18
SYMPK-215ENST00000600237 H0YAA0 97 aa7.65□□□□□ -1.18
SYMPK-215ENST00000600237 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
SYMPK-215ENST00000600237 CELSR1Q9NYQ6 3014 aa7.59□□□□□ -1.19
SYMPK-215ENST00000600237 TGP01266 2768 aa7.58□□□□□ -1.2
SYMPK-215ENST00000600237 C10orf95Q9H7T3 257 aa7.57□□□□□ -1.2
SYMPK-215ENST00000600237 MYO15AQ9UKN7 3530 aa7.53□□□□□ -1.2
SYMPK-215ENST00000600237 A0A1B0GVY2 172 aa7.52□□□□□ -1.21
SYMPK-215ENST00000600237 PDZD2O15018 2839 aa7.52□□□□□ -1.21
SYMPK-215ENST00000600237 DCHS1Q96JQ0 3298 aa7.51□□□□□ -1.21
SYMPK-215ENST00000600237 PKD1L1Q8TDX9 2849 aa7.51□□□□□ -1.21
SYMPK-215ENST00000600237 P0C880 135 aa7.5□□□□□ -1.21
SYMPK-215ENST00000600237 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
SYMPK-215ENST00000600237 RELNP78509 3460 aa7.46□□□□□ -1.22
SYMPK-215ENST00000600237 KRTAP10-8P60410 259 aa7.45□□□□□ -1.22
SYMPK-215ENST00000600237 MUC3AQ02505 3323 aa7.4□□□□□ -1.23
SYMPK-215ENST00000600237 OTOGQ6ZRI0 2925 aa7.36□□□□□ -1.23
SYMPK-215ENST00000600237 VWFP04275 2813 aa7.33□□□□□ -1.24
SYMPK-215ENST00000600237 WDFY3Q8IZQ1 3526 aa7.32□□□□□ -1.24
SYMPK-215ENST00000600237 KRTAP10-10P60014 251 aa7.28□□□□□ -1.24
SYMPK-215ENST00000600237 FBN1P35555 2871 aaKnown RBP7.26□□□□□ -1.25
SYMPK-215ENST00000600237 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
SYMPK-215ENST00000600237 LAMA5O15230 3695 aa7.22□□□□□ -1.25
SYMPK-215ENST00000600237 NBPF19A0A087WUL8 3843 aa7.22□□□□□ -1.25
SYMPK-215ENST00000600237 DMDP11532 3685 aa7.16□□□□□ -1.26
SYMPK-215ENST00000600237 KRTAP12-2P59991 146 aa7.14□□□□□ -1.27
SYMPK-215ENST00000600237 ASPMQ8IZT6 3477 aa7.13□□□□□ -1.27
SYMPK-215ENST00000600237 ZFHX3Q15911 3703 aa7.13□□□□□ -1.27
SYMPK-215ENST00000600237 SRRM2Q9UQ35 2752 aaKnown RBP7.1□□□□□ -1.27
SYMPK-215ENST00000600237 KRTAP12-1P59990 96 aa7.07□□□□□ -1.28
SYMPK-215ENST00000600237 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
SYMPK-215ENST00000600237 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
SYMPK-215ENST00000600237 ANK3Q12955 4377 aaKnown RBP7.06□□□□□ -1.28
SYMPK-215ENST00000600237 ZFHX4Q86UP3 3567 aa7.05□□□□□ -1.28
SYMPK-215ENST00000600237 FBN3Q75N90 2809 aa7.01□□□□□ -1.29
SYMPK-215ENST00000600237 MEGF8Q7Z7M0 2845 aa6.91□□□□□ -1.3
SYMPK-215ENST00000600237 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
SYMPK-215ENST00000600237 SMG1Q96Q15 3661 aaKnown RBP6.88□□□□□ -1.31
SYMPK-215ENST00000600237 COL7A1Q02388 2944 aa6.84□□□□□ -1.31
SYMPK-215ENST00000600237 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
SYMPK-215ENST00000600237 CSMD2Q7Z408 3487 aa6.83□□□□□ -1.32
SYMPK-215ENST00000600237 CSMD1Q96PZ7 3565 aa6.82□□□□□ -1.32
SYMPK-215ENST00000600237 TRRAPQ9Y4A5 3859 aa6.79□□□□□ -1.32
SYMPK-215ENST00000600237 KRTAP10-4P60372 401 aaPredicted RBP6.7□□□□□ -1.34
SYMPK-215ENST00000600237 SPENQ96T58 3664 aaKnown RBP6.68□□□□□ -1.34
SYMPK-215ENST00000600237 SVEP1Q4LDE5 3571 aa6.67□□□□□ -1.34
SYMPK-215ENST00000600237 KRTAP3-2Q9BYR7 98 aa6.66□□□□□ -1.34
SYMPK-215ENST00000600237 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.34
SYMPK-215ENST00000600237 KRTAP4-5Q9BYR2 181 aa6.65□□□□□ -1.34
SYMPK-215ENST00000600237 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
SYMPK-215ENST00000600237 HUWE1Q7Z6Z7 4374 aaKnown RBP6.6□□□□□ -1.35
SYMPK-215ENST00000600237 BSNQ9UPA5 3926 aa6.57□□□□□ -1.36
SYMPK-215ENST00000600237 CUBNO60494 3623 aa6.52□□□□□ -1.37
SYMPK-215ENST00000600237 ALMS1Q8TCU4 4167 aa6.45□□□□□ -1.38
SYMPK-215ENST00000600237 INE1O15225 51 aa6.43□□□□□ -1.38
SYMPK-215ENST00000600237 KRTAP10-12P60413 245 aa6.4□□□□□ -1.38
SYMPK-215ENST00000600237 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
SYMPK-215ENST00000600237 DNAH9Q9NYC9 4486 aa6.34□□□□□ -1.39
SYMPK-215ENST00000600237 DNAH5Q8TE73 4624 aa6.27□□□□□ -1.41
SYMPK-215ENST00000600237 VPS13CQ709C8 3753 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms