RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 TP53AIP1Q9HCN2 124 aa11.55□□□□□ -0.56
GRAMD1A-207ENST00000598118 CDK2AP2O75956 126 aa11.54□□□□□ -0.56
GRAMD1A-207ENST00000598118 NDUFS5O43920 106 aa11.52□□□□□ -0.56
GRAMD1A-207ENST00000598118 Q1T7F1 81 aa11.52□□□□□ -0.56
GRAMD1A-207ENST00000598118 SPINK6Q6UWN8 80 aa11.51□□□□□ -0.57
GRAMD1A-207ENST00000598118 MRPL34Q9BQ48 92 aaKnown RBP11.51□□□□□ -0.57
GRAMD1A-207ENST00000598118 PRO0628Q9UI54 55 aa11.51□□□□□ -0.57
GRAMD1A-207ENST00000598118 PKD1P98161 4303 aa11.5□□□□□ -0.57
GRAMD1A-207ENST00000598118 PCOTHQ58A44 107 aa11.49□□□□□ -0.57
GRAMD1A-207ENST00000598118 LRP1BQ9NZR2 4599 aa11.48□□□□□ -0.57
GRAMD1A-207ENST00000598118 FAT2Q9NYQ8 4349 aa11.48□□□□□ -0.57
GRAMD1A-207ENST00000598118 BRK1Q8WUW1 75 aa11.47□□□□□ -0.57
GRAMD1A-207ENST00000598118 CD164Q04900 197 aa11.46□□□□□ -0.58
GRAMD1A-207ENST00000598118 IGLV7-46A0A075B6I9 117 aa11.45□□□□□ -0.58
GRAMD1A-207ENST00000598118 KRTAP10-1P60331 282 aa11.43□□□□□ -0.58
GRAMD1A-207ENST00000598118 SSBP3-AS1Q7Z2R9 100 aa11.43□□□□□ -0.58
GRAMD1A-207ENST00000598118 PSPHP1O15172 72 aa11.42□□□□□ -0.58
GRAMD1A-207ENST00000598118 Q6ZSA8 131 aa11.41□□□□□ -0.58
GRAMD1A-207ENST00000598118 KRTAP13-2Q52LG2 175 aa11.39□□□□□ -0.59
GRAMD1A-207ENST00000598118 Q5W150 140 aa11.38□□□□□ -0.59
GRAMD1A-207ENST00000598118 COA5Q86WW8 74 aa11.37□□□□□ -0.59
GRAMD1A-207ENST00000598118 VPS13BQ7Z7G8 4022 aa11.36□□□□□ -0.59
GRAMD1A-207ENST00000598118 A8MUN3 132 aa11.34□□□□□ -0.59
GRAMD1A-207ENST00000598118 KRTAP13-3Q3SY46 172 aa11.34□□□□□ -0.59
GRAMD1A-207ENST00000598118 Q8N9P0 234 aaPredicted RBP11.34□□□□□ -0.59
GRAMD1A-207ENST00000598118 V9GYY9 64 aa11.3□□□□□ -0.6
GRAMD1A-207ENST00000598118 KRTAP1-4P0C5Y4 121 aa11.28□□□□□ -0.6
GRAMD1A-207ENST00000598118 C1orf195Q5TG92 126 aa11.28□□□□□ -0.6
GRAMD1A-207ENST00000598118 C8orf87E5RJ46 101 aa11.27□□□□□ -0.61
GRAMD1A-207ENST00000598118 Q5VV11 94 aa11.27□□□□□ -0.61
GRAMD1A-207ENST00000598118 LOC101927531A0A1B0GV80 90 aa11.26□□□□□ -0.61
GRAMD1A-207ENST00000598118 LINC00313P59037 77 aa11.24□□□□□ -0.61
GRAMD1A-207ENST00000598118 HRES1P13985 223 aa11.23□□□□□ -0.61
GRAMD1A-207ENST00000598118 LIMD2Q9BT23 127 aa11.23□□□□□ -0.61
GRAMD1A-207ENST00000598118 PKHD1P08F94 4074 aa11.2□□□□□ -0.62
GRAMD1A-207ENST00000598118 PRR15LQ9BU68 103 aa11.2□□□□□ -0.62
GRAMD1A-207ENST00000598118 RETNLBQ9BQ08 111 aa11.17□□□□□ -0.62
GRAMD1A-207ENST00000598118 A8MU10 97 aa11.15□□□□□ -0.62
GRAMD1A-207ENST00000598118 SACSQ9NZJ4 4579 aa11.15□□□□□ -0.62
GRAMD1A-207ENST00000598118 KRTAP16-1A8MUX0 517 aa11.15□□□□□ -0.62
GRAMD1A-207ENST00000598118 PLA2G1BP04054 148 aaKnown RBP11.14□□□□□ -0.63
GRAMD1A-207ENST00000598118 SPAG11AQ6PDA7 123 aa11.14□□□□□ -0.63
GRAMD1A-207ENST00000598118 CHKB-CPT1BH3BT56 60 aa11.13□□□□□ -0.63
GRAMD1A-207ENST00000598118 FAM229AH3BQW9 127 aa11.11□□□□□ -0.63
GRAMD1A-207ENST00000598118 TYMSOSQ8TAI1 123 aa11.08□□□□□ -0.64
GRAMD1A-207ENST00000598118 LINC01558Q9Y6Z2 57 aa11.08□□□□□ -0.64
GRAMD1A-207ENST00000598118 Q75L30 129 aa11.07□□□□□ -0.64
GRAMD1A-207ENST00000598118 PRR26Q8N8Z3 221 aa11.06□□□□□ -0.64
GRAMD1A-207ENST00000598118 IGKV2-30P06310 120 aa11.05□□□□□ -0.64
GRAMD1A-207ENST00000598118 C4orf48Q5BLP8 95 aa11.05□□□□□ -0.64
GRAMD1A-207ENST00000598118 DYNC1H1Q14204 4646 aaKnown RBP11.02□□□□□ -0.64
GRAMD1A-207ENST00000598118 SPINK1P00995 79 aa11.01□□□□□ -0.65
GRAMD1A-207ENST00000598118 ACYP2P14621 99 aa11.01□□□□□ -0.65
GRAMD1A-207ENST00000598118 DMAC1Q96GE9 116 aa11.01□□□□□ -0.65
GRAMD1A-207ENST00000598118 LCA10Q71F78 164 aa10.98□□□□□ -0.65
GRAMD1A-207ENST00000598118 A6NED7 52 aa10.97□□□□□ -0.65
GRAMD1A-207ENST00000598118 SMR3BP02814 79 aaPredicted RBP10.96□□□□□ -0.65
GRAMD1A-207ENST00000598118 FAT1Q14517 4588 aa10.94□□□□□ -0.66
GRAMD1A-207ENST00000598118 IGKV2D-30A0A075B6S6 120 aa10.93□□□□□ -0.66
GRAMD1A-207ENST00000598118 LINC00304Q8N9R0 145 aa10.92□□□□□ -0.66
GRAMD1A-207ENST00000598118 APOBP04114 4563 aaKnown RBP10.9□□□□□ -0.66
GRAMD1A-207ENST00000598118 SPINK7P58062 85 aa10.89□□□□□ -0.67
GRAMD1A-207ENST00000598118 PKHD1L1Q86WI1 4243 aa10.87□□□□□ -0.67
GRAMD1A-207ENST00000598118 A0A1B0GVY2 172 aa10.86□□□□□ -0.67
GRAMD1A-207ENST00000598118 RPS29P62273 56 aaKnown RBP10.85□□□□□ -0.67
GRAMD1A-207ENST00000598118 CDC42SE1Q9NRR8 79 aa10.84□□□□□ -0.67
GRAMD1A-207ENST00000598118 KRTAP10-4P60372 401 aaPredicted RBP10.83□□□□□ -0.68
GRAMD1A-207ENST00000598118 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
GRAMD1A-207ENST00000598118 PMAIP1Q13794 54 aa10.82□□□□□ -0.68
GRAMD1A-207ENST00000598118 ATP11AUNQ6ZP68 121 aa10.79□□□□□ -0.68
GRAMD1A-207ENST00000598118 RYR2Q92736 4967 aa10.77□□□□□ -0.69
GRAMD1A-207ENST00000598118 C7orf65Q6ZTY9 151 aa10.77□□□□□ -0.69
GRAMD1A-207ENST00000598118 C9orf92A6NGG3 77 aa10.73□□□□□ -0.69
GRAMD1A-207ENST00000598118 A0A1B0GU69 56 aa10.69□□□□□ -0.7
GRAMD1A-207ENST00000598118 Q8N1X5 172 aa10.68□□□□□ -0.7
GRAMD1A-207ENST00000598118 KMT2CQ8NEZ4 4911 aaKnown RBP10.68□□□□□ -0.7
GRAMD1A-207ENST00000598118 A6NN06 94 aa10.66□□□□□ -0.7
GRAMD1A-207ENST00000598118 A8MUU9 505 aa10.64□□□□□ -0.71
GRAMD1A-207ENST00000598118 C20orf166-AS1Q96NR2 134 aa10.64□□□□□ -0.71
GRAMD1A-207ENST00000598118 FLG2Q5D862 2391 aaPredicted RBP10.6□□□□□ -0.71
GRAMD1A-207ENST00000598118 KTN1-AS1Q86SY8 53 aa10.55□□□□□ -0.72
GRAMD1A-207ENST00000598118 LRP1Q07954 4544 aaKnown RBP10.53□□□□□ -0.72
GRAMD1A-207ENST00000598118 TNXBP22105 4242 aa10.52□□□□□ -0.72
GRAMD1A-207ENST00000598118 SPATA8Q6RVD6 105 aa10.51□□□□□ -0.73
GRAMD1A-207ENST00000598118 KRTAP3-1Q9BYR8 98 aa10.51□□□□□ -0.73
GRAMD1A-207ENST00000598118 FAT3Q8TDW7 4589 aa10.49□□□□□ -0.73
GRAMD1A-207ENST00000598118 UQCR11O14957 56 aa10.47□□□□□ -0.73
GRAMD1A-207ENST00000598118 HSPG2P98160 4391 aa10.45□□□□□ -0.74
GRAMD1A-207ENST00000598118 MIR22HGQ0VDD5 57 aa10.45□□□□□ -0.74
GRAMD1A-207ENST00000598118 KRTAP10-8P60410 259 aa10.38□□□□□ -0.75
GRAMD1A-207ENST00000598118 SEC61GP60059 68 aa10.37□□□□□ -0.75
GRAMD1A-207ENST00000598118 Q5VSD8 79 aa10.35□□□□□ -0.75
GRAMD1A-207ENST00000598118 RYR3Q15413 4870 aa10.34□□□□□ -0.75
GRAMD1A-207ENST00000598118 DMBT1Q9UGM3 2413 aaPredicted RBP10.33□□□□□ -0.76
GRAMD1A-207ENST00000598118 RYR1P21817 5038 aa10.31□□□□□ -0.76
GRAMD1A-207ENST00000598118 KRTAP17-1Q9BYP8 105 aa10.3□□□□□ -0.76
GRAMD1A-207ENST00000598118 COX6B2Q6YFQ2 88 aa10.28□□□□□ -0.76
GRAMD1A-207ENST00000598118 MYCBP2O75592 4640 aa10.28□□□□□ -0.76
GRAMD1A-207ENST00000598118 RBM12B-AS1Q9P1G2 102 aa10.27□□□□□ -0.77
GRAMD1A-207ENST00000598118 ADM2Q7Z4H4 148 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms