RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 CSAG1Q6PB30 78 aa6.67□□□□□ -1.34
CNTNAP1-204ENST00000591662 A8MU10 97 aa6.66□□□□□ -1.34
CNTNAP1-204ENST00000591662 Q5W150 140 aa6.65□□□□□ -1.34
CNTNAP1-204ENST00000591662 COX6B2Q6YFQ2 88 aa6.65□□□□□ -1.34
CNTNAP1-204ENST00000591662 DMBT1Q9UGM3 2413 aaPredicted RBP6.65□□□□□ -1.35
CNTNAP1-204ENST00000591662 SPATA8Q6RVD6 105 aa6.64□□□□□ -1.35
CNTNAP1-204ENST00000591662 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.64□□□□□ -1.35
CNTNAP1-204ENST00000591662 A0A087X002 238 aa6.63□□□□□ -1.35
CNTNAP1-204ENST00000591662 A0A1B0GU33 70 aa6.61□□□□□ -1.35
CNTNAP1-204ENST00000591662 LINC00483Q53H64 154 aa6.61□□□□□ -1.35
CNTNAP1-204ENST00000591662 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
CNTNAP1-204ENST00000591662 Q8N1X5 172 aa6.6□□□□□ -1.35
CNTNAP1-204ENST00000591662 SPENQ96T58 3664 aaKnown RBP6.6□□□□□ -1.35
CNTNAP1-204ENST00000591662 KMT2BQ9UMN6 2715 aaPredicted RBP6.59□□□□□ -1.35
CNTNAP1-204ENST00000591662 KRTAP7-1Q8IUC3 87 aa6.58□□□□□ -1.36
CNTNAP1-204ENST00000591662 PLAC8Q9NZF1 115 aa6.55□□□□□ -1.36
CNTNAP1-204ENST00000591662 TENM4Q6N022 2769 aa6.53□□□□□ -1.36
CNTNAP1-204ENST00000591662 KRTAP1-5Q9BYS1 174 aa6.52□□□□□ -1.37
CNTNAP1-204ENST00000591662 CSMD2Q7Z408 3487 aa6.49□□□□□ -1.37
CNTNAP1-204ENST00000591662 NOTCH2NLQ7Z3S9 236 aa6.46□□□□□ -1.37
CNTNAP1-204ENST00000591662 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.38
CNTNAP1-204ENST00000591662 Q6ZSA8 131 aa6.44□□□□□ -1.38
CNTNAP1-204ENST00000591662 KRTAP11-1Q8IUC1 163 aa6.44□□□□□ -1.38
CNTNAP1-204ENST00000591662 KRTAP13-1Q8IUC0 172 aa6.43□□□□□ -1.38
CNTNAP1-204ENST00000591662 ZFHX3Q15911 3703 aa6.4□□□□□ -1.38
CNTNAP1-204ENST00000591662 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.38
CNTNAP1-204ENST00000591662 NBPF19A0A087WUL8 3843 aa6.4□□□□□ -1.39
CNTNAP1-204ENST00000591662 A0A0D9SG42 100 aa6.4□□□□□ -1.39
CNTNAP1-204ENST00000591662 H1FX-AS1Q4G0G2 97 aa6.39□□□□□ -1.39
CNTNAP1-204ENST00000591662 PANO1I0J062 215 aa6.39□□□□□ -1.39
CNTNAP1-204ENST00000591662 ROMO1P60602 79 aa6.38□□□□□ -1.39
CNTNAP1-204ENST00000591662 TENM1Q9UKZ4 2725 aa6.37□□□□□ -1.39
CNTNAP1-204ENST00000591662 KRTAP10-1P60331 282 aa6.37□□□□□ -1.39
CNTNAP1-204ENST00000591662 KRTAP10-2P60368 255 aa6.37□□□□□ -1.39
CNTNAP1-204ENST00000591662 FBN1P35555 2871 aaKnown RBP6.36□□□□□ -1.39
CNTNAP1-204ENST00000591662 BSNQ9UPA5 3926 aa6.35□□□□□ -1.39
CNTNAP1-204ENST00000591662 RPL37P61927 97 aaKnown RBP6.35□□□□□ -1.39
CNTNAP1-204ENST00000591662 TENM3Q9P273 2699 aa6.35□□□□□ -1.39
CNTNAP1-204ENST00000591662 VWFP04275 2813 aa6.33□□□□□ -1.4
CNTNAP1-204ENST00000591662 OTOGQ6ZRI0 2925 aa6.31□□□□□ -1.4
CNTNAP1-204ENST00000591662 Q5VSD8 79 aa6.3□□□□□ -1.4
CNTNAP1-204ENST00000591662 PDZD2O15018 2839 aa6.28□□□□□ -1.4
CNTNAP1-204ENST00000591662 M0R2T5 61 aa6.26□□□□□ -1.41
CNTNAP1-204ENST00000591662 Q6ZRN7 208 aaPredicted RBP6.26□□□□□ -1.41
CNTNAP1-204ENST00000591662 LUZP6Q538Z0 58 aa6.24□□□□□ -1.41
CNTNAP1-204ENST00000591662 VPS13CQ709C8 3753 aa6.24□□□□□ -1.41
CNTNAP1-204ENST00000591662 CAMK2N1Q7Z7J9 78 aa6.23□□□□□ -1.41
CNTNAP1-204ENST00000591662 SEC61BP60468 96 aaKnown RBP6.22□□□□□ -1.41
CNTNAP1-204ENST00000591662 S4R3F8 94 aa6.19□□□□□ -1.42
CNTNAP1-204ENST00000591662 RPS29P62273 56 aaKnown RBP6.18□□□□□ -1.42
CNTNAP1-204ENST00000591662 A8MUU9 505 aa6.17□□□□□ -1.42
CNTNAP1-204ENST00000591662 PKD1L1Q8TDX9 2849 aa6.17□□□□□ -1.42
CNTNAP1-204ENST00000591662 KRTAP16-1A8MUX0 517 aa6.14□□□□□ -1.43
CNTNAP1-204ENST00000591662 KRTAP13-3Q3SY46 172 aa6.13□□□□□ -1.43
CNTNAP1-204ENST00000591662 KRTAP13-2Q52LG2 175 aa6.13□□□□□ -1.43
CNTNAP1-204ENST00000591662 A0A0A0MQY5 61 aa6.12□□□□□ -1.43
CNTNAP1-204ENST00000591662 R4GN34 69 aa6.12□□□□□ -1.43
CNTNAP1-204ENST00000591662 H0YAA0 97 aa6.08□□□□□ -1.44
CNTNAP1-204ENST00000591662 TENM2Q9NT68 2774 aa6.07□□□□□ -1.44
CNTNAP1-204ENST00000591662 KRTAP21-3Q3LHN1 58 aa6.06□□□□□ -1.44
CNTNAP1-204ENST00000591662 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
CNTNAP1-204ENST00000591662 TRRAPQ9Y4A5 3859 aa6.06□□□□□ -1.44
CNTNAP1-204ENST00000591662 TGP01266 2768 aa6.05□□□□□ -1.44
CNTNAP1-204ENST00000591662 C20orf166-AS1Q96NR2 134 aa6□□□□□ -1.45
CNTNAP1-204ENST00000591662 M0QZ58 72 aa5.98□□□□□ -1.45
CNTNAP1-204ENST00000591662 ZNF469Q96JG9 3925 aaPredicted RBP5.97□□□□□ -1.45
CNTNAP1-204ENST00000591662 ANK3Q12955 4377 aaKnown RBP5.96□□□□□ -1.46
CNTNAP1-204ENST00000591662 KRTAP1-4P0C5Y4 121 aa5.9□□□□□ -1.46
CNTNAP1-204ENST00000591662 SRRM2Q9UQ35 2752 aaKnown RBP5.86□□□□□ -1.47
CNTNAP1-204ENST00000591662 PLAC4Q8WY50 150 aa5.82□□□□□ -1.48
CNTNAP1-204ENST00000591662 C10orf95Q9H7T3 257 aa5.82□□□□□ -1.48
CNTNAP1-204ENST00000591662 P0C880 135 aa5.78□□□□□ -1.48
CNTNAP1-204ENST00000591662 FBN3Q75N90 2809 aa5.76□□□□□ -1.49
CNTNAP1-204ENST00000591662 CSMD3Q7Z407 3707 aa5.71□□□□□ -1.49
CNTNAP1-204ENST00000591662 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
CNTNAP1-204ENST00000591662 MEGF8Q7Z7M0 2845 aa5.65□□□□□ -1.5
CNTNAP1-204ENST00000591662 TPRXLQ17RH7 258 aa5.65□□□□□ -1.5
CNTNAP1-204ENST00000591662 XP32Q5T750 250 aa5.65□□□□□ -1.5
CNTNAP1-204ENST00000591662 KRTAP3-1Q9BYR8 98 aa5.64□□□□□ -1.51
CNTNAP1-204ENST00000591662 COL7A1Q02388 2944 aa5.6□□□□□ -1.51
CNTNAP1-204ENST00000591662 AKAP9Q99996 3911 aa5.59□□□□□ -1.51
CNTNAP1-204ENST00000591662 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
CNTNAP1-204ENST00000591662 TNP1P09430 55 aa5.54□□□□□ -1.52
CNTNAP1-204ENST00000591662 KRTAP10-6P60371 365 aaPredicted RBP5.52□□□□□ -1.53
CNTNAP1-204ENST00000591662 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
CNTNAP1-204ENST00000591662 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
CNTNAP1-204ENST00000591662 HUWE1Q7Z6Z7 4374 aaKnown RBP5.48□□□□□ -1.53
CNTNAP1-204ENST00000591662 KRTAP10-8P60410 259 aa5.48□□□□□ -1.53
CNTNAP1-204ENST00000591662 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
CNTNAP1-204ENST00000591662 A0A1B0GVY2 172 aa5.46□□□□□ -1.53
CNTNAP1-204ENST00000591662 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
CNTNAP1-204ENST00000591662 KRTAP3-2Q9BYR7 98 aa5.36□□□□□ -1.55
CNTNAP1-204ENST00000591662 KRTAP3-3Q9BYR6 98 aa5.33□□□□□ -1.56
CNTNAP1-204ENST00000591662 DNAH9Q9NYC9 4486 aa5.31□□□□□ -1.56
CNTNAP1-204ENST00000591662 DNHD1Q96M86 4753 aa5.26□□□□□ -1.57
CNTNAP1-204ENST00000591662 PLECQ15149 4684 aaKnown RBP5.25□□□□□ -1.57
CNTNAP1-204ENST00000591662 PRO2289Q9P1D8 64 aa5.23□□□□□ -1.57
CNTNAP1-204ENST00000591662 DNAH10Q8IVF4 4471 aa5.22□□□□□ -1.57
CNTNAP1-204ENST00000591662 ALMS1Q8TCU4 4167 aa5.19□□□□□ -1.58
CNTNAP1-204ENST00000591662 ANK2Q01484 3957 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms