RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 SPACA4Q8TDM5 124 aa11.61□□□□□ -0.55
MBD3-207ENST00000590550 NUPR2A6NF83 97 aa11.6□□□□□ -0.55
MBD3-207ENST00000590550 ADM2Q7Z4H4 148 aa11.6□□□□□ -0.55
MBD3-207ENST00000590550 HRES1P13985 223 aa11.58□□□□□ -0.56
MBD3-207ENST00000590550 A0A087WTM6 91 aa11.56□□□□□ -0.56
MBD3-207ENST00000590550 HECTD4Q9Y4D8 3996 aa11.56□□□□□ -0.56
MBD3-207ENST00000590550 VPS13DQ5THJ4 4388 aa11.54□□□□□ -0.56
MBD3-207ENST00000590550 MEGF8Q7Z7M0 2845 aa11.52□□□□□ -0.56
MBD3-207ENST00000590550 PSORS1C2Q9UIG4 136 aa11.52□□□□□ -0.56
MBD3-207ENST00000590550 PRR26Q8N8Z3 221 aa11.52□□□□□ -0.57
MBD3-207ENST00000590550 Q96NJ1 140 aa11.51□□□□□ -0.57
MBD3-207ENST00000590550 RTL8CO15255 209 aa11.51□□□□□ -0.57
MBD3-207ENST00000590550 DNAH2Q9P225 4427 aa11.51□□□□□ -0.57
MBD3-207ENST00000590550 FBN3Q75N90 2809 aa11.49□□□□□ -0.57
MBD3-207ENST00000590550 DNAH8Q96JB1 4490 aa11.49□□□□□ -0.57
MBD3-207ENST00000590550 H3BS24 57 aa11.48□□□□□ -0.57
MBD3-207ENST00000590550 WWC2-AS2Q96NR7 200 aa11.45□□□□□ -0.58
MBD3-207ENST00000590550 IGLV5-52A0A0A0MRZ9 124 aa11.45□□□□□ -0.58
MBD3-207ENST00000590550 IGHV6-1A0A0B4J1U7 121 aa11.45□□□□□ -0.58
MBD3-207ENST00000590550 LINC00483Q53H64 154 aa11.43□□□□□ -0.58
MBD3-207ENST00000590550 TP53AIP1Q9HCN2 124 aa11.43□□□□□ -0.58
MBD3-207ENST00000590550 LINC01554Q52M75 96 aa11.42□□□□□ -0.58
MBD3-207ENST00000590550 DNAH17Q9UFH2 4485 aa11.41□□□□□ -0.58
MBD3-207ENST00000590550 A0A087X002 238 aa11.4□□□□□ -0.58
MBD3-207ENST00000590550 Q6ZR54 194 aa11.4□□□□□ -0.58
MBD3-207ENST00000590550 NOTCH2NLQ7Z3S9 236 aa11.4□□□□□ -0.58
MBD3-207ENST00000590550 C8orf17Q9NRJ1 99 aa11.39□□□□□ -0.59
MBD3-207ENST00000590550 ZNF861PO60384 105 aa11.38□□□□□ -0.59
MBD3-207ENST00000590550 ZNF706Q9Y5V0 76 aaPredicted RBP11.36□□□□□ -0.59
MBD3-207ENST00000590550 DNAH6Q9C0G6 4158 aa11.36□□□□□ -0.59
MBD3-207ENST00000590550 SPINK6Q6UWN8 80 aa11.35□□□□□ -0.59
MBD3-207ENST00000590550 DNHD1Q96M86 4753 aa11.34□□□□□ -0.59
MBD3-207ENST00000590550 A0A1B0GVX0 72 aa11.33□□□□□ -0.59
MBD3-207ENST00000590550 PLA2G1BP04054 148 aaKnown RBP11.33□□□□□ -0.59
MBD3-207ENST00000590550 ASB16-AS1Q495Z4 193 aa11.33□□□□□ -0.6
MBD3-207ENST00000590550 CDK2AP2O75956 126 aa11.32□□□□□ -0.6
MBD3-207ENST00000590550 CIRBP-AS1Q8TBR5 109 aa11.29□□□□□ -0.6
MBD3-207ENST00000590550 C1orf134Q5TEV5 83 aa11.29□□□□□ -0.6
MBD3-207ENST00000590550 LY6G6CO95867 125 aa11.28□□□□□ -0.6
MBD3-207ENST00000590550 MRPL34Q9BQ48 92 aaKnown RBP11.27□□□□□ -0.61
MBD3-207ENST00000590550 IGLV7-43P04211 117 aa11.26□□□□□ -0.61
MBD3-207ENST00000590550 ALMS1Q8TCU4 4167 aa11.23□□□□□ -0.61
MBD3-207ENST00000590550 A0A1B0GU69 56 aa11.22□□□□□ -0.61
MBD3-207ENST00000590550 DNAH11Q96DT5 4516 aa11.22□□□□□ -0.61
MBD3-207ENST00000590550 KRTAP10-2P60368 255 aa11.22□□□□□ -0.61
MBD3-207ENST00000590550 Q5W150 140 aa11.22□□□□□ -0.61
MBD3-207ENST00000590550 ACYP2P14621 99 aa11.2□□□□□ -0.62
MBD3-207ENST00000590550 CSAG1Q6PB30 78 aa11.19□□□□□ -0.62
MBD3-207ENST00000590550 DNAH5Q8TE73 4624 aa11.18□□□□□ -0.62
MBD3-207ENST00000590550 MIR22HGQ0VDD5 57 aa11.15□□□□□ -0.63
MBD3-207ENST00000590550 SPATA8Q6RVD6 105 aa11.14□□□□□ -0.63
MBD3-207ENST00000590550 RETNLBQ9BQ08 111 aa11.14□□□□□ -0.63
MBD3-207ENST00000590550 LRP1BQ9NZR2 4599 aa11.1□□□□□ -0.63
MBD3-207ENST00000590550 HYDINQ4G0P3 5121 aa11.09□□□□□ -0.63
MBD3-207ENST00000590550 UQCR11O14957 56 aa11.06□□□□□ -0.64
MBD3-207ENST00000590550 KRTAP13-2Q52LG2 175 aa11.05□□□□□ -0.64
MBD3-207ENST00000590550 DMAC1Q96GE9 116 aa11.04□□□□□ -0.64
MBD3-207ENST00000590550 KRTAP10-1P60331 282 aa11.04□□□□□ -0.64
MBD3-207ENST00000590550 KRTAP13-3Q3SY46 172 aa11.04□□□□□ -0.64
MBD3-207ENST00000590550 SSBP3-AS1Q7Z2R9 100 aa11.03□□□□□ -0.64
MBD3-207ENST00000590550 PKD1P98161 4303 aa10.98□□□□□ -0.65
MBD3-207ENST00000590550 VPS13BQ7Z7G8 4022 aa10.96□□□□□ -0.66
MBD3-207ENST00000590550 FAT2Q9NYQ8 4349 aa10.95□□□□□ -0.66
MBD3-207ENST00000590550 Q6ZSA8 131 aa10.91□□□□□ -0.66
MBD3-207ENST00000590550 KRTAP1-4P0C5Y4 121 aa10.88□□□□□ -0.67
MBD3-207ENST00000590550 PKHD1P08F94 4074 aa10.84□□□□□ -0.67
MBD3-207ENST00000590550 FAM229AH3BQW9 127 aa10.83□□□□□ -0.68
MBD3-207ENST00000590550 KRTAP16-1A8MUX0 517 aa10.82□□□□□ -0.68
MBD3-207ENST00000590550 SPINK1P00995 79 aa10.8□□□□□ -0.68
MBD3-207ENST00000590550 IGKV2-30P06310 120 aa10.79□□□□□ -0.68
MBD3-207ENST00000590550 IGKV2D-30A0A075B6S6 120 aa10.79□□□□□ -0.68
MBD3-207ENST00000590550 TYMSOSQ8TAI1 123 aa10.75□□□□□ -0.69
MBD3-207ENST00000590550 ROMO1P60602 79 aa10.69□□□□□ -0.7
MBD3-207ENST00000590550 KRTAP25-1Q3LHN0 102 aa10.68□□□□□ -0.7
MBD3-207ENST00000590550 SMR3BP02814 79 aaPredicted RBP10.67□□□□□ -0.7
MBD3-207ENST00000590550 CRIPTQ9P021 101 aa10.64□□□□□ -0.71
MBD3-207ENST00000590550 FLG2Q5D862 2391 aaPredicted RBP10.62□□□□□ -0.71
MBD3-207ENST00000590550 A8MUU9 505 aa10.61□□□□□ -0.71
MBD3-207ENST00000590550 Q8N1X5 172 aa10.6□□□□□ -0.71
MBD3-207ENST00000590550 LINC00304Q8N9R0 145 aa10.6□□□□□ -0.71
MBD3-207ENST00000590550 FAT1Q14517 4588 aa10.59□□□□□ -0.71
MBD3-207ENST00000590550 H0YAA0 97 aa10.59□□□□□ -0.71
MBD3-207ENST00000590550 SACSQ9NZJ4 4579 aa10.58□□□□□ -0.72
MBD3-207ENST00000590550 DYNC1H1Q14204 4646 aaKnown RBP10.55□□□□□ -0.72
MBD3-207ENST00000590550 C9orf92A6NGG3 77 aa10.53□□□□□ -0.72
MBD3-207ENST00000590550 P0C880 135 aa10.46□□□□□ -0.74
MBD3-207ENST00000590550 A0A1B0GU33 70 aa10.41□□□□□ -0.74
MBD3-207ENST00000590550 APOBP04114 4563 aaKnown RBP10.38□□□□□ -0.75
MBD3-207ENST00000590550 RPS29P62273 56 aaKnown RBP10.35□□□□□ -0.75
MBD3-207ENST00000590550 KRTAP10-4P60372 401 aaPredicted RBP10.34□□□□□ -0.75
MBD3-207ENST00000590550 A0A1B0GVY2 172 aa10.31□□□□□ -0.76
MBD3-207ENST00000590550 PKHD1L1Q86WI1 4243 aa10.31□□□□□ -0.76
MBD3-207ENST00000590550 H1FX-AS1Q4G0G2 97 aa10.31□□□□□ -0.76
MBD3-207ENST00000590550 C20orf166-AS1Q96NR2 134 aa10.27□□□□□ -0.76
MBD3-207ENST00000590550 KMT2CQ8NEZ4 4911 aaKnown RBP10.27□□□□□ -0.76
MBD3-207ENST00000590550 KRTAP3-1Q9BYR8 98 aa10.26□□□□□ -0.77
MBD3-207ENST00000590550 K7ERS5 55 aa10.24□□□□□ -0.77
MBD3-207ENST00000590550 LRP1Q07954 4544 aaKnown RBP10.22□□□□□ -0.77
MBD3-207ENST00000590550 RYR2Q92736 4967 aa10.22□□□□□ -0.77
MBD3-207ENST00000590550 SPINT4Q6UDR6 99 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms