RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 SRRM2Q9UQ35 2752 aaKnown RBP4.42□□□□□ -1.7
SMAD4-210ENST00000590061 Q5VSD8 79 aa4.41□□□□□ -1.7
SMAD4-210ENST00000590061 ST20-AS1Q8NBB2 130 aa4.41□□□□□ -1.7
SMAD4-210ENST00000590061 Q8NBF4 154 aa4.41□□□□□ -1.7
SMAD4-210ENST00000590061 OBSCN-AS1Q96MR7 158 aa4.41□□□□□ -1.7
SMAD4-210ENST00000590061 CCDC179H3BU77 68 aa4.4□□□□□ -1.71
SMAD4-210ENST00000590061 LINC01547P58512 204 aaPredicted RBP4.4□□□□□ -1.71
SMAD4-210ENST00000590061 HAMPP81172 84 aa4.4□□□□□ -1.71
SMAD4-210ENST00000590061 ETDBQ3ZM63 59 aa4.4□□□□□ -1.71
SMAD4-210ENST00000590061 Q5XG85 94 aa4.4□□□□□ -1.71
SMAD4-210ENST00000590061 SPAG11AQ6PDA7 123 aa4.4□□□□□ -1.71
SMAD4-210ENST00000590061 BRK1Q8WUW1 75 aa4.4□□□□□ -1.71
SMAD4-210ENST00000590061 VPS13BQ7Z7G8 4022 aa4.39□□□□□ -1.71
SMAD4-210ENST00000590061 C9orf153Q5TBE3 101 aa4.39□□□□□ -1.71
SMAD4-210ENST00000590061 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
SMAD4-210ENST00000590061 SMIM26A0A096LP01 95 aa4.38□□□□□ -1.71
SMAD4-210ENST00000590061 TRBV7-4A0A0J9YYF1 115 aa4.38□□□□□ -1.71
SMAD4-210ENST00000590061 UQCRQO14949 82 aa4.38□□□□□ -1.71
SMAD4-210ENST00000590061 APOBP04114 4563 aaKnown RBP4.38□□□□□ -1.71
SMAD4-210ENST00000590061 CCKP06307 115 aa4.37□□□□□ -1.71
SMAD4-210ENST00000590061 SMIM29Q86T20 159 aa4.37□□□□□ -1.71
SMAD4-210ENST00000590061 FAM236AA0A1B0GUQ0 79 aa4.36□□□□□ -1.71
SMAD4-210ENST00000590061 FAM236BA0A1B0GV22 79 aa4.36□□□□□ -1.71
SMAD4-210ENST00000590061 TYMSOSQ8TAI1 123 aa4.36□□□□□ -1.71
SMAD4-210ENST00000590061 IGHV6-1A0A0B4J1U7 121 aa4.35□□□□□ -1.71
SMAD4-210ENST00000590061 SPINK1P00995 79 aa4.35□□□□□ -1.71
SMAD4-210ENST00000590061 IGKV2-30P06310 120 aa4.35□□□□□ -1.71
SMAD4-210ENST00000590061 KRTAP10-4P60372 401 aaPredicted RBP4.35□□□□□ -1.71
SMAD4-210ENST00000590061 RPS29P62273 56 aaKnown RBP4.35□□□□□ -1.71
SMAD4-210ENST00000590061 MOBPQ13875 183 aa4.35□□□□□ -1.71
SMAD4-210ENST00000590061 Q6ZQT0 140 aa4.35□□□□□ -1.71
SMAD4-210ENST00000590061 LIMD2Q9BT23 127 aa4.35□□□□□ -1.71
SMAD4-210ENST00000590061 C14orf132Q9NPU4 83 aa4.35□□□□□ -1.71
SMAD4-210ENST00000590061 HSPG2P98160 4391 aa4.35□□□□□ -1.71
SMAD4-210ENST00000590061 KRTAP1-4P0C5Y4 121 aa4.34□□□□□ -1.71
SMAD4-210ENST00000590061 C3orf22Q8N5N4 141 aa4.34□□□□□ -1.71
SMAD4-210ENST00000590061 UBL5Q9BZL1 73 aa4.34□□□□□ -1.71
SMAD4-210ENST00000590061 IGFL1Q6UW32 110 aa4.33□□□□□ -1.72
SMAD4-210ENST00000590061 LCA10Q71F78 164 aa4.33□□□□□ -1.72
SMAD4-210ENST00000590061 TRBV7-7A0A0K0K1E9 115 aa4.31□□□□□ -1.72
SMAD4-210ENST00000590061 NREPQ16612 68 aa4.31□□□□□ -1.72
SMAD4-210ENST00000590061 ATP5EP2Q5VTU8 51 aa4.31□□□□□ -1.72
SMAD4-210ENST00000590061 LINC00304Q8N9R0 145 aa4.31□□□□□ -1.72
SMAD4-210ENST00000590061 FAT1Q14517 4588 aa4.31□□□□□ -1.72
SMAD4-210ENST00000590061 A8MUN3 132 aa4.3□□□□□ -1.72
SMAD4-210ENST00000590061 ASB16-AS1Q495Z4 193 aa4.3□□□□□ -1.72
SMAD4-210ENST00000590061 SERP1Q9Y6X1 66 aa4.3□□□□□ -1.72
SMAD4-210ENST00000590061 A0A087X002 238 aa4.29□□□□□ -1.72
SMAD4-210ENST00000590061 CXCL6P80162 114 aa4.29□□□□□ -1.72
SMAD4-210ENST00000590061 ANAPC11Q9NYG5 84 aa4.29□□□□□ -1.72
SMAD4-210ENST00000590061 FLG2Q5D862 2391 aaPredicted RBP4.29□□□□□ -1.72
SMAD4-210ENST00000590061 HERC1Q15751 4861 aa4.28□□□□□ -1.72
SMAD4-210ENST00000590061 A0A1W2PNM2 257 aa4.28□□□□□ -1.72
SMAD4-210ENST00000590061 KRTAP13-2Q52LG2 175 aa4.28□□□□□ -1.72
SMAD4-210ENST00000590061 LINC00643Q86TS7 51 aa4.28□□□□□ -1.72
SMAD4-210ENST00000590061 DMBT1Q9UGM3 2413 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-210ENST00000590061 A0A087WSZ3 146 aa4.27□□□□□ -1.73
SMAD4-210ENST00000590061 NDUFB1O75438 58 aa4.27□□□□□ -1.73
SMAD4-210ENST00000590061 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
SMAD4-210ENST00000590061 MPLKIPQ8TAP9 179 aa4.27□□□□□ -1.73
SMAD4-210ENST00000590061 BPY2O14599 106 aa4.26□□□□□ -1.73
SMAD4-210ENST00000590061 MT-ATP8P03928 68 aa4.26□□□□□ -1.73
SMAD4-210ENST00000590061 LINC00313P59037 77 aa4.25□□□□□ -1.73
SMAD4-210ENST00000590061 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
SMAD4-210ENST00000590061 LINC00846Q9NV44 126 aa4.24□□□□□ -1.73
SMAD4-210ENST00000590061 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
SMAD4-210ENST00000590061 ATP5EP56381 51 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-210ENST00000590061 FP248Q71RG6 208 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-210ENST00000590061 COX7CP15954 63 aa4.22□□□□□ -1.73
SMAD4-210ENST00000590061 HIST1H4AP62805 103 aaKnown RBP4.21□□□□□ -1.74
SMAD4-210ENST00000590061 LINC00472Q9H8W2 130 aa4.21□□□□□ -1.74
SMAD4-210ENST00000590061 A8MWP4 228 aa4.2□□□□□ -1.74
SMAD4-210ENST00000590061 IGKV4-1P06312 121 aa4.2□□□□□ -1.74
SMAD4-210ENST00000590061 OCR1Q9BZK8 76 aa4.2□□□□□ -1.74
SMAD4-210ENST00000590061 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
SMAD4-210ENST00000590061 A0A0G2JQZ4 141 aa4.18□□□□□ -1.74
SMAD4-210ENST00000590061 ATOX1O00244 68 aa4.18□□□□□ -1.74
SMAD4-210ENST00000590061 LINC01554Q52M75 96 aa4.18□□□□□ -1.74
SMAD4-210ENST00000590061 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
SMAD4-210ENST00000590061 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
SMAD4-210ENST00000590061 A0A1B0GVX0 72 aa4.16□□□□□ -1.74
SMAD4-210ENST00000590061 MYCBP2O75592 4640 aa4.15□□□□□ -1.74
SMAD4-210ENST00000590061 PRR4Q16378 134 aa4.15□□□□□ -1.75
SMAD4-210ENST00000590061 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.75
SMAD4-210ENST00000590061 KRTAP16-1A8MUX0 517 aa4.14□□□□□ -1.75
SMAD4-210ENST00000590061 Q96NJ1 140 aa4.14□□□□□ -1.75
SMAD4-210ENST00000590061 IGKV3D-7A0A0C4DH55 119 aa4.13□□□□□ -1.75
SMAD4-210ENST00000590061 DSCR10P59022 87 aa4.13□□□□□ -1.75
SMAD4-210ENST00000590061 FAT3Q8TDW7 4589 aa4.13□□□□□ -1.75
SMAD4-210ENST00000590061 IGLV7-46A0A075B6I9 117 aa4.12□□□□□ -1.75
SMAD4-210ENST00000590061 IGKV2D-30A0A075B6S6 120 aa4.12□□□□□ -1.75
SMAD4-210ENST00000590061 HCG22E2RYF7 251 aa4.12□□□□□ -1.75
SMAD4-210ENST00000590061 K7ERS5 55 aa4.12□□□□□ -1.75
SMAD4-210ENST00000590061 hDV103S1A0JD37 113 aa4.11□□□□□ -1.75
SMAD4-210ENST00000590061 DEFB116Q30KQ4 102 aa4.11□□□□□ -1.75
SMAD4-210ENST00000590061 ATP11AUNQ6ZP68 121 aa4.11□□□□□ -1.75
SMAD4-210ENST00000590061 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
SMAD4-210ENST00000590061 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
SMAD4-210ENST00000590061 LRP1Q07954 4544 aaKnown RBP4.11□□□□□ -1.75
SMAD4-210ENST00000590061 TNXBP22105 4242 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms