RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 NSD1Q96L73 2696 aaPredicted RBP3.82□□□□□ -1.8
AP000547.3-204ENST00000588548 Q96NJ1 140 aa3.82□□□□□ -1.8
AP000547.3-204ENST00000588548 ATRQ13535 2644 aa3.81□□□□□ -1.8
AP000547.3-204ENST00000588548 CDK2AP2O75956 126 aa3.81□□□□□ -1.8
AP000547.3-204ENST00000588548 TLX1NBP0CAT3 122 aa3.81□□□□□ -1.8
AP000547.3-204ENST00000588548 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
AP000547.3-204ENST00000588548 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
AP000547.3-204ENST00000588548 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
AP000547.3-204ENST00000588548 A0A1B0GVX0 72 aa3.8□□□□□ -1.8
AP000547.3-204ENST00000588548 CHTF8P0CG12 524 aa3.8□□□□□ -1.8
AP000547.3-204ENST00000588548 FBN1P35555 2871 aaKnown RBP3.8□□□□□ -1.8
AP000547.3-204ENST00000588548 SPRR1BP22528 89 aa3.79□□□□□ -1.8
AP000547.3-204ENST00000588548 KRTAP11-1Q8IUC1 163 aa3.79□□□□□ -1.8
AP000547.3-204ENST00000588548 CRIPTQ9P021 101 aa3.79□□□□□ -1.8
AP000547.3-204ENST00000588548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.78□□□□□ -1.8
AP000547.3-204ENST00000588548 COL6A5A8TX70 2615 aa3.78□□□□□ -1.8
AP000547.3-204ENST00000588548 DEFB4AO15263 64 aa3.78□□□□□ -1.8
AP000547.3-204ENST00000588548 H0YAA0 97 aa3.77□□□□□ -1.81
AP000547.3-204ENST00000588548 SEC61BP60468 96 aaKnown RBP3.77□□□□□ -1.81
AP000547.3-204ENST00000588548 ANK2Q01484 3957 aa3.77□□□□□ -1.81
AP000547.3-204ENST00000588548 FLG2Q5D862 2391 aaPredicted RBP3.77□□□□□ -1.81
AP000547.3-204ENST00000588548 LY6G6CO95867 125 aa3.76□□□□□ -1.81
AP000547.3-204ENST00000588548 SSBP3-AS1Q7Z2R9 100 aa3.76□□□□□ -1.81
AP000547.3-204ENST00000588548 PRLHP81277 87 aa3.76□□□□□ -1.81
AP000547.3-204ENST00000588548 XP32Q5T750 250 aa3.76□□□□□ -1.81
AP000547.3-204ENST00000588548 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
AP000547.3-204ENST00000588548 K7ERS5 55 aa3.75□□□□□ -1.81
AP000547.3-204ENST00000588548 DNHD1Q96M86 4753 aa3.75□□□□□ -1.81
AP000547.3-204ENST00000588548 PANO1I0J062 215 aa3.75□□□□□ -1.81
AP000547.3-204ENST00000588548 PKD1L1Q8TDX9 2849 aa3.75□□□□□ -1.81
AP000547.3-204ENST00000588548 STAB1Q9NY15 2570 aa3.75□□□□□ -1.81
AP000547.3-204ENST00000588548 IGLV9-49A0A0B4J1Y8 123 aa3.74□□□□□ -1.81
AP000547.3-204ENST00000588548 Q6ZSA8 131 aa3.74□□□□□ -1.81
AP000547.3-204ENST00000588548 DEFB135Q30KP9 77 aa3.74□□□□□ -1.81
AP000547.3-204ENST00000588548 PSORS1C2Q9UIG4 136 aa3.74□□□□□ -1.81
AP000547.3-204ENST00000588548 CMYA5Q8N3K9 4069 aa3.73□□□□□ -1.81
AP000547.3-204ENST00000588548 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
AP000547.3-204ENST00000588548 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
AP000547.3-204ENST00000588548 TENM3Q9P273 2699 aa3.71□□□□□ -1.82
AP000547.3-204ENST00000588548 A0A096LNI7 61 aa3.7□□□□□ -1.82
AP000547.3-204ENST00000588548 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
AP000547.3-204ENST00000588548 IGKV2-30P06310 120 aa3.7□□□□□ -1.82
AP000547.3-204ENST00000588548 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
AP000547.3-204ENST00000588548 HTN3P15516 51 aa3.69□□□□□ -1.82
AP000547.3-204ENST00000588548 NBDYA0A0U1RRE5 68 aa3.68□□□□□ -1.82
AP000547.3-204ENST00000588548 NBEAL1Q6ZS30 2694 aa3.68□□□□□ -1.82
AP000547.3-204ENST00000588548 NOTCH1P46531 2555 aa3.67□□□□□ -1.82
AP000547.3-204ENST00000588548 KRTAP24-1Q3LI83 254 aa3.67□□□□□ -1.82
AP000547.3-204ENST00000588548 ANAPC11Q9NYG5 84 aa3.67□□□□□ -1.82
AP000547.3-204ENST00000588548 KRTAP10-11P60412 298 aa3.66□□□□□ -1.82
AP000547.3-204ENST00000588548 A0A1B0GU33 70 aa3.66□□□□□ -1.82
AP000547.3-204ENST00000588548 SPART-AS1P0CW21 52 aa3.65□□□□□ -1.83
AP000547.3-204ENST00000588548 DNAH3Q8TD57 4116 aa3.65□□□□□ -1.83
AP000547.3-204ENST00000588548 IGKV2D-30A0A075B6S6 120 aa3.65□□□□□ -1.83
AP000547.3-204ENST00000588548 LINC01556Q5JQF7 62 aa3.64□□□□□ -1.83
AP000547.3-204ENST00000588548 H1FX-AS1Q4G0G2 97 aa3.64□□□□□ -1.83
AP000547.3-204ENST00000588548 MGAM2Q2M2H8 2515 aa3.63□□□□□ -1.83
AP000547.3-204ENST00000588548 CIRBP-AS1Q8TBR5 109 aa3.63□□□□□ -1.83
AP000547.3-204ENST00000588548 HUWE1Q7Z6Z7 4374 aaKnown RBP3.63□□□□□ -1.83
AP000547.3-204ENST00000588548 H3BNG1 76 aa3.62□□□□□ -1.83
AP000547.3-204ENST00000588548 DNAH1Q9P2D7 4330 aa3.62□□□□□ -1.83
AP000547.3-204ENST00000588548 LYSTQ99698 3801 aa3.61□□□□□ -1.83
AP000547.3-204ENST00000588548 SRRM2Q9UQ35 2752 aaKnown RBP3.61□□□□□ -1.83
AP000547.3-204ENST00000588548 SPINK1P00995 79 aa3.61□□□□□ -1.83
AP000547.3-204ENST00000588548 WWC2-AS2Q96NR7 200 aa3.61□□□□□ -1.83
AP000547.3-204ENST00000588548 KRTAP17-1Q9BYP8 105 aa3.61□□□□□ -1.83
AP000547.3-204ENST00000588548 DNAH10Q8IVF4 4471 aa3.6□□□□□ -1.83
AP000547.3-204ENST00000588548 TYMSOSQ8TAI1 123 aa3.6□□□□□ -1.83
AP000547.3-204ENST00000588548 C10orf95Q9H7T3 257 aa3.58□□□□□ -1.84
AP000547.3-204ENST00000588548 KRTAP13-1Q8IUC0 172 aa3.58□□□□□ -1.84
AP000547.3-204ENST00000588548 DNAH9Q9NYC9 4486 aa3.57□□□□□ -1.84
AP000547.3-204ENST00000588548 CSMD3Q7Z407 3707 aa3.57□□□□□ -1.84
AP000547.3-204ENST00000588548 COL7A1Q02388 2944 aa3.56□□□□□ -1.84
AP000547.3-204ENST00000588548 SPINK6Q6UWN8 80 aa3.56□□□□□ -1.84
AP000547.3-204ENST00000588548 C14orf177Q52M58 125 aa3.55□□□□□ -1.84
AP000547.3-204ENST00000588548 TGP01266 2768 aa3.54□□□□□ -1.84
AP000547.3-204ENST00000588548 DNAH7Q8WXX0 4024 aa3.54□□□□□ -1.84
AP000547.3-204ENST00000588548 STAB2Q8WWQ8 2551 aa3.54□□□□□ -1.84
AP000547.3-204ENST00000588548 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
AP000547.3-204ENST00000588548 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
AP000547.3-204ENST00000588548 FBN3Q75N90 2809 aa3.53□□□□□ -1.84
AP000547.3-204ENST00000588548 MEGF8Q7Z7M0 2845 aa3.53□□□□□ -1.84
AP000547.3-204ENST00000588548 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
AP000547.3-204ENST00000588548 KRTAP4-8A0A0G2JLE6 195 aa3.51□□□□□ -1.85
AP000547.3-204ENST00000588548 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
AP000547.3-204ENST00000588548 RPL37P61927 97 aaKnown RBP3.51□□□□□ -1.85
AP000547.3-204ENST00000588548 PLECQ15149 4684 aaKnown RBP3.51□□□□□ -1.85
AP000547.3-204ENST00000588548 COX6B2Q6YFQ2 88 aa3.51□□□□□ -1.85
AP000547.3-204ENST00000588548 Q8N1X5 172 aa3.51□□□□□ -1.85
AP000547.3-204ENST00000588548 PRKDCP78527 4128 aaKnown RBP3.5□□□□□ -1.85
AP000547.3-204ENST00000588548 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
AP000547.3-204ENST00000588548 KRTAP1-5Q9BYS1 174 aa3.48□□□□□ -1.85
AP000547.3-204ENST00000588548 DYNC2H1Q8NCM8 4307 aaKnown RBP3.48□□□□□ -1.85
AP000547.3-204ENST00000588548 KRTAP9-8Q9BYQ0 159 aa3.47□□□□□ -1.85
AP000547.3-204ENST00000588548 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
AP000547.3-204ENST00000588548 STARD9Q9P2P6 4700 aa3.46□□□□□ -1.86
AP000547.3-204ENST00000588548 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
AP000547.3-204ENST00000588548 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
AP000547.3-204ENST00000588548 DNAH2Q9P225 4427 aa3.43□□□□□ -1.86
AP000547.3-204ENST00000588548 VPS13DQ5THJ4 4388 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms