RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 PELP1Q8IZL8 1130 aaKnown RBP11.75□□□□□ -0.53
AP000547.3-204ENST00000588548 MYT1Q01538 1121 aa11.54□□□□□ -0.56
AP000547.3-204ENST00000588548 CHIC1Q5VXU3 224 aa11.48□□□□□ -0.57
AP000547.3-204ENST00000588548 NISCHQ9Y2I1 1504 aa11.38□□□□□ -0.59
AP000547.3-204ENST00000588548 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
AP000547.3-204ENST00000588548 TTBK1Q5TCY1 1321 aaPredicted RBP11.09□□□□□ -0.63
AP000547.3-204ENST00000588548 HRCP23327 699 aa11.03□□□□□ -0.64
AP000547.3-204ENST00000588548 SCAF1Q9H7N4 1312 aaKnown RBP10.79□□□□□ -0.68
AP000547.3-204ENST00000588548 PRKCSHP14314 528 aaPredicted RBP10.77□□□□□ -0.69
AP000547.3-204ENST00000588548 PPARGC1BQ86YN6 1023 aaKnown RBP10.65□□□□□ -0.7
AP000547.3-204ENST00000588548 BCL11AQ9H165 835 aa10.6□□□□□ -0.71
AP000547.3-204ENST00000588548 ERICH6Q7L0X2 663 aa10.54□□□□□ -0.72
AP000547.3-204ENST00000588548 APLP2Q06481 763 aa10.53□□□□□ -0.72
AP000547.3-204ENST00000588548 FAM9AQ8IZU1 332 aaPredicted RBP10.48□□□□□ -0.73
AP000547.3-204ENST00000588548 PHF23Q9BUL5 403 aaPredicted RBP10.4□□□□□ -0.74
AP000547.3-204ENST00000588548 PCGF6Q9BYE7 350 aa10.35□□□□□ -0.75
AP000547.3-204ENST00000588548 CENPBP07199 599 aaPredicted RBP10.34□□□□□ -0.75
AP000547.3-204ENST00000588548 ACIN1Q9UKV3 1341 aaKnown RBP10.33□□□□□ -0.76
AP000547.3-204ENST00000588548 SLC24A1O60721 1099 aa10.26□□□□□ -0.77
AP000547.3-204ENST00000588548 NEUROD1Q13562 356 aa10.23□□□□□ -0.77
AP000547.3-204ENST00000588548 GTF3C3Q9Y5Q9 886 aa10.23□□□□□ -0.77
AP000547.3-204ENST00000588548 ZEB1P37275 1124 aaPredicted RBP10.15□□□□□ -0.78
AP000547.3-204ENST00000588548 MYO15BQ96JP2 1530 aa10.14□□□□□ -0.79
AP000547.3-204ENST00000588548 ANP32EQ9BTT0 268 aa10.14□□□□□ -0.79
AP000547.3-204ENST00000588548 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.8
AP000547.3-204ENST00000588548 CCDC180Q9P1Z9 1646 aa10.02□□□□□ -0.81
AP000547.3-204ENST00000588548 DCAF1Q9Y4B6 1507 aa10□□□□□ -0.81
AP000547.3-204ENST00000588548 DAXXQ9UER7 740 aaPredicted RBP9.95□□□□□ -0.82
AP000547.3-204ENST00000588548 TRIM26Q12899 539 aaPredicted RBP9.92□□□□□ -0.82
AP000547.3-204ENST00000588548 EIF5BO60841 1220 aaKnown RBP9.87□□□□□ -0.83
AP000547.3-204ENST00000588548 UBE2Q2Q8WVN8 375 aa9.84□□□□□ -0.83
AP000547.3-204ENST00000588548 ANO8Q9HCE9 1232 aaPredicted RBP9.83□□□□□ -0.84
AP000547.3-204ENST00000588548 TSHZ2Q9NRE2 1034 aa9.77□□□□□ -0.85
AP000547.3-204ENST00000588548 SHROOM4Q9ULL8 1493 aa9.76□□□□□ -0.85
AP000547.3-204ENST00000588548 DIEXFQ68CQ4 756 aaKnown RBP9.73□□□□□ -0.85
AP000547.3-204ENST00000588548 EHMT2Q96KQ7 1210 aa9.7□□□□□ -0.86
AP000547.3-204ENST00000588548 CLSPNQ9HAW4 1339 aa9.65□□□□□ -0.86
AP000547.3-204ENST00000588548 PLEKHG5O94827 1062 aa9.65□□□□□ -0.86
AP000547.3-204ENST00000588548 SALL2Q9Y467 1007 aaPredicted RBP9.62□□□□□ -0.87
AP000547.3-204ENST00000588548 ZCCHC6Q5VYS8 1495 aaKnown RBP9.6□□□□□ -0.87
AP000547.3-204ENST00000588548 SUPT16HQ9Y5B9 1047 aaKnown RBP9.6□□□□□ -0.87
AP000547.3-204ENST00000588548 ERICH6BQ5W0A0 696 aa9.59□□□□□ -0.87
AP000547.3-204ENST00000588548 PKNOX2Q96KN3 472 aa9.57□□□□□ -0.88
AP000547.3-204ENST00000588548 MYT1LQ9UL68 1186 aa9.56□□□□□ -0.88
AP000547.3-204ENST00000588548 YTHDC1Q96MU7 727 aaKnown RBP9.56□□□□□ -0.88
AP000547.3-204ENST00000588548 TRIM41Q8WV44 630 aa9.55□□□□□ -0.88
AP000547.3-204ENST00000588548 DCAF8L2P0C7V8 631 aa9.55□□□□□ -0.88
AP000547.3-204ENST00000588548 CCDC136Q96JN2 1154 aa9.54□□□□□ -0.88
AP000547.3-204ENST00000588548 PODXL2Q9NZ53 605 aa9.54□□□□□ -0.88
AP000547.3-204ENST00000588548 PLPPR3Q6T4P5 718 aa9.54□□□□□ -0.88
AP000547.3-204ENST00000588548 SUPT5HO00267 1087 aaKnown RBP9.52□□□□□ -0.89
AP000547.3-204ENST00000588548 DEKP35659 375 aaKnown RBP9.48□□□□□ -0.89
AP000547.3-204ENST00000588548 LOC105371045A0A1W2PR82 267 aa9.47□□□□□ -0.89
AP000547.3-204ENST00000588548 MSH5O43196 834 aa9.45□□□□□ -0.9
AP000547.3-204ENST00000588548 RBM19Q9Y4C8 960 aaKnown RBP9.45□□□□□ -0.9
AP000547.3-204ENST00000588548 MIER1Q8N108 512 aa9.41□□□□□ -0.9
AP000547.3-204ENST00000588548 ZNF316A6NFI3 1004 aaPredicted RBP9.4□□□□□ -0.9
AP000547.3-204ENST00000588548 KCNA4P22459 653 aa9.4□□□□□ -0.91
AP000547.3-204ENST00000588548 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
AP000547.3-204ENST00000588548 CCER1Q8TC90 406 aaPredicted RBP9.36□□□□□ -0.91
AP000547.3-204ENST00000588548 FANCIQ9NVI1 1328 aa9.35□□□□□ -0.91
AP000547.3-204ENST00000588548 ABCC9O60706 1549 aa9.35□□□□□ -0.91
AP000547.3-204ENST00000588548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.34□□□□□ -0.91
AP000547.3-204ENST00000588548 SENP3Q9H4L4 574 aaPredicted RBP9.32□□□□□ -0.92
AP000547.3-204ENST00000588548 ADRA2BP18089 450 aa9.31□□□□□ -0.92
AP000547.3-204ENST00000588548 NEFLP07196 543 aa9.29□□□□□ -0.92
AP000547.3-204ENST00000588548 IL27Q8NEV9 243 aa9.28□□□□□ -0.92
AP000547.3-204ENST00000588548 RTN4Q9NQC3 1192 aaKnown RBP9.22□□□□□ -0.93
AP000547.3-204ENST00000588548 ZMYND15Q9H091 742 aa9.21□□□□□ -0.94
AP000547.3-204ENST00000588548 PDE4CQ08493 712 aa9.19□□□□□ -0.94
AP000547.3-204ENST00000588548 GLIPR1L2Q4G1C9 344 aa9.19□□□□□ -0.94
AP000547.3-204ENST00000588548 BCANQ96GW7 911 aa9.19□□□□□ -0.94
AP000547.3-204ENST00000588548 FGD1P98174 961 aa9.16□□□□□ -0.94
AP000547.3-204ENST00000588548 PDIA4P13667 645 aaKnown RBP9.16□□□□□ -0.94
AP000547.3-204ENST00000588548 FKBP8Q14318 412 aa9.15□□□□□ -0.94
AP000547.3-204ENST00000588548 C11orf95C9JLR9 678 aaPredicted RBP9.11□□□□□ -0.95
AP000547.3-204ENST00000588548 AAMPQ13685 434 aa9.11□□□□□ -0.95
AP000547.3-204ENST00000588548 VSIG10Q8N0Z9 540 aa9.11□□□□□ -0.95
AP000547.3-204ENST00000588548 SCRIBQ14160 1630 aa9.11□□□□□ -0.95
AP000547.3-204ENST00000588548 RSPH6AQ9H0K4 717 aa9.1□□□□□ -0.95
AP000547.3-204ENST00000588548 POTEDQ86YR6 584 aa9.09□□□□□ -0.95
AP000547.3-204ENST00000588548 NBR1Q14596 966 aa9.09□□□□□ -0.95
AP000547.3-204ENST00000588548 A0A0U1RQG5 324 aaPredicted RBP9.08□□□□□ -0.96
AP000547.3-204ENST00000588548 RBM10P98175 930 aaKnown RBP9.08□□□□□ -0.96
AP000547.3-204ENST00000588548 TIMELESSQ9UNS1 1208 aa9.07□□□□□ -0.96
AP000547.3-204ENST00000588548 ITGAEP38570 1179 aa9.06□□□□□ -0.96
AP000547.3-204ENST00000588548 NOP58Q9Y2X3 529 aaKnown RBP9.06□□□□□ -0.96
AP000547.3-204ENST00000588548 NCBP3Q53F19 620 aaKnown RBP9.05□□□□□ -0.96
AP000547.3-204ENST00000588548 BCL11BQ9C0K0 894 aaPredicted RBP9.05□□□□□ -0.96
AP000547.3-204ENST00000588548 KLHL34Q8N239 644 aa9.05□□□□□ -0.96
AP000547.3-204ENST00000588548 RTL5Q5HYW3 569 aaPredicted RBP9.04□□□□□ -0.96
AP000547.3-204ENST00000588548 CDK11AQ9UQ88 783 aaPredicted RBP9.03□□□□□ -0.96
AP000547.3-204ENST00000588548 PPP6R1Q9UPN7 881 aa9.03□□□□□ -0.96
AP000547.3-204ENST00000588548 WASHC2AQ641Q2 1341 aa9.03□□□□□ -0.96
AP000547.3-204ENST00000588548 WASHC2CQ9Y4E1 1318 aa9.02□□□□□ -0.97
AP000547.3-204ENST00000588548 RSF1Q96T23 1441 aaPredicted RBP9.01□□□□□ -0.97
AP000547.3-204ENST00000588548 RANGAP1P46060 587 aaPredicted RBP9.01□□□□□ -0.97
AP000547.3-204ENST00000588548 PAK3O75914 559 aaPredicted RBP9□□□□□ -0.97
AP000547.3-204ENST00000588548 TAF7LQ5H9L4 462 aa8.98□□□□□ -0.97
AP000547.3-204ENST00000588548 ARXQ96QS3 562 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms