RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 KRTAP13-2Q52LG2 175 aa5.43□□□□□ -1.54
SS18-220ENST00000582092 SPAG11AQ6PDA7 123 aa5.43□□□□□ -1.54
SS18-220ENST00000582092 ABCA13Q86UQ4 5058 aa5.42□□□□□ -1.54
SS18-220ENST00000582092 A0A1B0GVX0 72 aa5.42□□□□□ -1.54
SS18-220ENST00000582092 KRTAP1-4P0C5Y4 121 aa5.42□□□□□ -1.54
SS18-220ENST00000582092 ASB16-AS1Q495Z4 193 aa5.42□□□□□ -1.54
SS18-220ENST00000582092 C20orf197Q8N268 126 aa5.42□□□□□ -1.54
SS18-220ENST00000582092 DNAH8Q96JB1 4490 aa5.41□□□□□ -1.54
SS18-220ENST00000582092 hDV103S1A0JD37 113 aa5.41□□□□□ -1.54
SS18-220ENST00000582092 PRR26Q8N8Z3 221 aa5.41□□□□□ -1.54
SS18-220ENST00000582092 LINC00304Q8N9R0 145 aa5.41□□□□□ -1.54
SS18-220ENST00000582092 Q96NJ1 140 aa5.41□□□□□ -1.54
SS18-220ENST00000582092 NDUFS5O43920 106 aa5.4□□□□□ -1.54
SS18-220ENST00000582092 MP68P56378 58 aa5.4□□□□□ -1.54
SS18-220ENST00000582092 C8orf17Q9NRJ1 99 aa5.4□□□□□ -1.54
SS18-220ENST00000582092 C5orf47Q569G3 176 aa5.39□□□□□ -1.55
SS18-220ENST00000582092 Q5XG85 94 aa5.39□□□□□ -1.55
SS18-220ENST00000582092 OCR1Q9BZK8 76 aa5.39□□□□□ -1.55
SS18-220ENST00000582092 VPS13BQ7Z7G8 4022 aa5.39□□□□□ -1.55
SS18-220ENST00000582092 C8orf87E5RJ46 101 aa5.38□□□□□ -1.55
SS18-220ENST00000582092 NDUFC1O43677 76 aa5.37□□□□□ -1.55
SS18-220ENST00000582092 TMEM254Q8TBM7 123 aa5.37□□□□□ -1.55
SS18-220ENST00000582092 TP53AIP1Q9HCN2 124 aa5.37□□□□□ -1.55
SS18-220ENST00000582092 MMP24-AS1A0A0U1RRL7 71 aa5.36□□□□□ -1.55
SS18-220ENST00000582092 LINC00313P59037 77 aa5.36□□□□□ -1.55
SS18-220ENST00000582092 SNURFQ9Y675 71 aa5.36□□□□□ -1.55
SS18-220ENST00000582092 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
SS18-220ENST00000582092 C1orf195Q5TG92 126 aa5.35□□□□□ -1.55
SS18-220ENST00000582092 MRPL34Q9BQ48 92 aaKnown RBP5.35□□□□□ -1.55
SS18-220ENST00000582092 H0Y9P7 68 aa5.33□□□□□ -1.56
SS18-220ENST00000582092 MT1HL1P0DM35 61 aa5.33□□□□□ -1.56
SS18-220ENST00000582092 TMEM258P61165 79 aa5.33□□□□□ -1.56
SS18-220ENST00000582092 KLKP1Q107X0 134 aa5.33□□□□□ -1.56
SS18-220ENST00000582092 MYCBP2O75592 4640 aa5.33□□□□□ -1.56
SS18-220ENST00000582092 H3BPC8 53 aa5.32□□□□□ -1.56
SS18-220ENST00000582092 A0A0U1RQV1 116 aa5.3□□□□□ -1.56
SS18-220ENST00000582092 LINC00208Q96KT6 92 aa5.3□□□□□ -1.56
SS18-220ENST00000582092 TRAV22A0A0B4J277 110 aa5.29□□□□□ -1.56
SS18-220ENST00000582092 KRTAP10-8P60410 259 aa5.29□□□□□ -1.56
SS18-220ENST00000582092 ATP5EP56381 51 aaPredicted RBP5.28□□□□□ -1.56
SS18-220ENST00000582092 FAM236DA0A1B0GTK5 79 aa5.27□□□□□ -1.57
SS18-220ENST00000582092 FAM236CP0DP71 79 aa5.27□□□□□ -1.57
SS18-220ENST00000582092 C1orf64Q8NEQ6 169 aa5.27□□□□□ -1.57
SS18-220ENST00000582092 H7BZZ5 65 aa5.26□□□□□ -1.57
SS18-220ENST00000582092 NOTCH2NLQ7Z3S9 236 aa5.26□□□□□ -1.57
SS18-220ENST00000582092 CYSTM1Q9H1C7 97 aa5.25□□□□□ -1.57
SS18-220ENST00000582092 LRP1Q07954 4544 aaKnown RBP5.25□□□□□ -1.57
SS18-220ENST00000582092 PKHD1L1Q86WI1 4243 aa5.24□□□□□ -1.57
SS18-220ENST00000582092 HERC1Q15751 4861 aa5.23□□□□□ -1.57
SS18-220ENST00000582092 LOC101927531A0A1B0GV80 90 aa5.21□□□□□ -1.58
SS18-220ENST00000582092 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
SS18-220ENST00000582092 ZCCHC13Q8WW36 166 aaKnown RBP5.2□□□□□ -1.58
SS18-220ENST00000582092 RETNLBQ9BQ08 111 aa5.2□□□□□ -1.58
SS18-220ENST00000582092 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
SS18-220ENST00000582092 C9orf92A6NGG3 77 aa5.18□□□□□ -1.58
SS18-220ENST00000582092 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
SS18-220ENST00000582092 PCOTHQ58A44 107 aa5.18□□□□□ -1.58
SS18-220ENST00000582092 SERP1Q9Y6X1 66 aa5.18□□□□□ -1.58
SS18-220ENST00000582092 FP248Q71RG6 208 aaPredicted RBP5.16□□□□□ -1.58
SS18-220ENST00000582092 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.59
SS18-220ENST00000582092 SPANXA2-OT1Q8N9U9 137 aa5.15□□□□□ -1.59
SS18-220ENST00000582092 PRR4Q16378 134 aa5.14□□□□□ -1.59
SS18-220ENST00000582092 Q5W150 140 aa5.14□□□□□ -1.59
SS18-220ENST00000582092 IGLV7-46A0A075B6I9 117 aa5.13□□□□□ -1.59
SS18-220ENST00000582092 IGKV2D-30A0A075B6S6 120 aa5.12□□□□□ -1.59
SS18-220ENST00000582092 IGKV2-30P06310 120 aa5.12□□□□□ -1.59
SS18-220ENST00000582092 CYP4F30PQ9H0H9 118 aa5.12□□□□□ -1.59
SS18-220ENST00000582092 TNXBP22105 4242 aa5.1□□□□□ -1.59
SS18-220ENST00000582092 A8MUU9 505 aa5.09□□□□□ -1.59
SS18-220ENST00000582092 C20orf166-AS1Q96NR2 134 aa5.09□□□□□ -1.59
SS18-220ENST00000582092 KRTAP13-3Q3SY46 172 aa5.08□□□□□ -1.6
SS18-220ENST00000582092 ATP11AUNQ6ZP68 121 aa5.08□□□□□ -1.6
SS18-220ENST00000582092 C7orf65Q6ZTY9 151 aa5.08□□□□□ -1.6
SS18-220ENST00000582092 SMIM26A0A096LP01 95 aa5.07□□□□□ -1.6
SS18-220ENST00000582092 Q75L30 129 aa5.06□□□□□ -1.6
SS18-220ENST00000582092 ACYP2P14621 99 aa5.05□□□□□ -1.6
SS18-220ENST00000582092 HRES1P13985 223 aa5.04□□□□□ -1.6
SS18-220ENST00000582092 CHKB-CPT1BH3BT56 60 aa5.02□□□□□ -1.61
SS18-220ENST00000582092 HMCN2Q8NDA2 5059 aa5.01□□□□□ -1.61
SS18-220ENST00000582092 COA5Q86WW8 74 aa5.01□□□□□ -1.61
SS18-220ENST00000582092 TPRXLQ17RH7 258 aa5□□□□□ -1.61
SS18-220ENST00000582092 RPL37P61927 97 aaKnown RBP4.99□□□□□ -1.61
SS18-220ENST00000582092 V9GYY9 64 aa4.99□□□□□ -1.61
SS18-220ENST00000582092 SPINK7P58062 85 aa4.98□□□□□ -1.61
SS18-220ENST00000582092 MPLKIPQ8TAP9 179 aa4.98□□□□□ -1.61
SS18-220ENST00000582092 XP32Q5T750 250 aa4.97□□□□□ -1.61
SS18-220ENST00000582092 LRP2P98164 4655 aa4.96□□□□□ -1.61
SS18-220ENST00000582092 DMAC1Q96GE9 116 aa4.96□□□□□ -1.62
SS18-220ENST00000582092 A8MUN3 132 aa4.95□□□□□ -1.62
SS18-220ENST00000582092 C4orf26Q17RF5 130 aa4.94□□□□□ -1.62
SS18-220ENST00000582092 SPTSSBQ8NFR3 76 aa4.92□□□□□ -1.62
SS18-220ENST00000582092 Q1T7F1 81 aa4.91□□□□□ -1.62
SS18-220ENST00000582092 UBR4Q5T4S7 5183 aa4.91□□□□□ -1.62
SS18-220ENST00000582092 SEC61BP60468 96 aaKnown RBP4.89□□□□□ -1.63
SS18-220ENST00000582092 LPAP08519 4548 aa4.89□□□□□ -1.63
SS18-220ENST00000582092 COX6B2Q6YFQ2 88 aa4.86□□□□□ -1.63
SS18-220ENST00000582092 PRR15LQ9BU68 103 aa4.86□□□□□ -1.63
SS18-220ENST00000582092 PSPHP1O15172 72 aa4.85□□□□□ -1.63
SS18-220ENST00000582092 SEC61GP60059 68 aa4.83□□□□□ -1.64
SS18-220ENST00000582092 RBM12B-AS1Q9P1G2 102 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms