RNA–Protein interactions for RNA: ENST00000580869.1

COX6CP3-201, Transcript of cytochrome c oxidase subunit 6C pseudogene 3, humanhuman

BASIC

Gene COX6CP3, Length 223 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6CP3-201ENST00000580869 SNRPGP62308 76 aaKnown RBP0.58□□□□□ -2.32
COX6CP3-201ENST00000580869 DCHS2Q6V1P9 2916 aa0.57□□□□□ -2.32
COX6CP3-201ENST00000580869 MMP24-AS1A0A0U1RRL7 71 aa0.57□□□□□ -2.32
COX6CP3-201ENST00000580869 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
COX6CP3-201ENST00000580869 KMT2AQ03164 3969 aa0.57□□□□□ -2.32
COX6CP3-201ENST00000580869 FLNCQ14315 2725 aa0.57□□□□□ -2.32
COX6CP3-201ENST00000580869 ZZEF1O43149 2961 aa0.57□□□□□ -2.32
COX6CP3-201ENST00000580869 ACACAQ13085 2346 aa0.56□□□□□ -2.32
COX6CP3-201ENST00000580869 CACNA1AO00555 2505 aa0.56□□□□□ -2.32
COX6CP3-201ENST00000580869 MTORP42345 2549 aa0.56□□□□□ -2.32
COX6CP3-201ENST00000580869 M0QY20 66 aa0.56□□□□□ -2.32
COX6CP3-201ENST00000580869 FLNAP21333 2647 aaKnown RBP0.56□□□□□ -2.32
COX6CP3-201ENST00000580869 SPRR2DP22532 72 aa0.55□□□□□ -2.32
COX6CP3-201ENST00000580869 RIF1Q5UIP0 2472 aaKnown RBP0.55□□□□□ -2.32
COX6CP3-201ENST00000580869 LRRK2Q5S007 2527 aa0.55□□□□□ -2.32
COX6CP3-201ENST00000580869 EPG5Q9HCE0 2579 aa0.54□□□□□ -2.32
COX6CP3-201ENST00000580869 LRP1Q07954 4544 aaKnown RBP0.54□□□□□ -2.32
COX6CP3-201ENST00000580869 M0QZ58 72 aa0.54□□□□□ -2.32
COX6CP3-201ENST00000580869 NSD1Q96L73 2696 aaPredicted RBP0.54□□□□□ -2.32
COX6CP3-201ENST00000580869 DMBT1Q9UGM3 2413 aaPredicted RBP0.54□□□□□ -2.32
COX6CP3-201ENST00000580869 SETD2Q9BYW2 2564 aaPredicted RBP0.53□□□□□ -2.32
COX6CP3-201ENST00000580869 LYSTQ99698 3801 aa0.53□□□□□ -2.33
COX6CP3-201ENST00000580869 MYCBP2O75592 4640 aa0.53□□□□□ -2.33
COX6CP3-201ENST00000580869 SPG11Q96JI7 2443 aa0.53□□□□□ -2.33
COX6CP3-201ENST00000580869 GCN1Q92616 2671 aaKnown RBP0.52□□□□□ -2.33
COX6CP3-201ENST00000580869 UTP20O75691 2785 aaKnown RBP0.52□□□□□ -2.33
COX6CP3-201ENST00000580869 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
COX6CP3-201ENST00000580869 HRNRQ86YZ3 2850 aaPredicted RBP0.51□□□□□ -2.33
COX6CP3-201ENST00000580869 H3BNG1 76 aa0.51□□□□□ -2.33
COX6CP3-201ENST00000580869 SPRR2BP35325 72 aa0.51□□□□□ -2.33
COX6CP3-201ENST00000580869 FAM186AA6NE01 2351 aa0.5□□□□□ -2.33
COX6CP3-201ENST00000580869 AHNAKQ09666 5890 aaKnown RBP0.5□□□□□ -2.33
COX6CP3-201ENST00000580869 PDZD2O15018 2839 aa0.5□□□□□ -2.33
COX6CP3-201ENST00000580869 ANKRD11Q6UB99 2663 aaPredicted RBP0.5□□□□□ -2.33
COX6CP3-201ENST00000580869 LPAP08519 4548 aa0.5□□□□□ -2.33
COX6CP3-201ENST00000580869 TENM3Q9P273 2699 aa0.49□□□□□ -2.33
COX6CP3-201ENST00000580869 SPTBN4Q9H254 2564 aa0.49□□□□□ -2.33
COX6CP3-201ENST00000580869 TNP1P09430 55 aa0.49□□□□□ -2.33
COX6CP3-201ENST00000580869 TACC2O95359 2948 aa0.48□□□□□ -2.33
COX6CP3-201ENST00000580869 NBEAQ8NFP9 2946 aa0.48□□□□□ -2.33
COX6CP3-201ENST00000580869 MAST4O15021 2626 aa0.48□□□□□ -2.33
COX6CP3-201ENST00000580869 DMXL1Q9Y485 3027 aa0.48□□□□□ -2.33
COX6CP3-201ENST00000580869 ANKHD1Q8IWZ3 2542 aaKnown RBP0.47□□□□□ -2.33
COX6CP3-201ENST00000580869 COL7A1Q02388 2944 aa0.47□□□□□ -2.33
COX6CP3-201ENST00000580869 DUOX1Q9NRD9 1551 aa0.47□□□□□ -2.33
COX6CP3-201ENST00000580869 PKD1P98161 4303 aa0.46□□□□□ -2.34
COX6CP3-201ENST00000580869 SONP18583 2426 aaKnown RBP0.46□□□□□ -2.34
COX6CP3-201ENST00000580869 POLR2KP53803 58 aaKnown RBP0.46□□□□□ -2.34
COX6CP3-201ENST00000580869 TENM2Q9NT68 2774 aa0.45□□□□□ -2.34
COX6CP3-201ENST00000580869 MROH2BQ7Z745 1585 aa0.45□□□□□ -2.34
COX6CP3-201ENST00000580869 COL6A5A8TX70 2615 aa0.45□□□□□ -2.34
COX6CP3-201ENST00000580869 VPS13BQ7Z7G8 4022 aa0.45□□□□□ -2.34
COX6CP3-201ENST00000580869 CLPSL2Q6UWE3 100 aa0.44□□□□□ -2.34
COX6CP3-201ENST00000580869 FASNP49327 2511 aaKnown RBP0.44□□□□□ -2.34
COX6CP3-201ENST00000580869 NBEAL2Q6ZNJ1 2754 aa0.44□□□□□ -2.34
COX6CP3-201ENST00000580869 FAT4Q6V0I7 4981 aa0.43□□□□□ -2.34
COX6CP3-201ENST00000580869 COL12A1Q99715 3063 aa0.43□□□□□ -2.34
COX6CP3-201ENST00000580869 STAB2Q8WWQ8 2551 aa0.43□□□□□ -2.34
COX6CP3-201ENST00000580869 COL6A3P12111 3177 aa0.43□□□□□ -2.34
COX6CP3-201ENST00000580869 STAB1Q9NY15 2570 aa0.43□□□□□ -2.34
COX6CP3-201ENST00000580869 SPRR2AP35326 72 aa0.42□□□□□ -2.34
COX6CP3-201ENST00000580869 SACSQ9NZJ4 4579 aa0.42□□□□□ -2.34
COX6CP3-201ENST00000580869 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
COX6CP3-201ENST00000580869 KALRNO60229 2985 aa0.42□□□□□ -2.34
COX6CP3-201ENST00000580869 TGP01266 2768 aa0.41□□□□□ -2.34
COX6CP3-201ENST00000580869 HECTD4Q9Y4D8 3996 aa0.41□□□□□ -2.34
COX6CP3-201ENST00000580869 FLGP20930 4061 aaPredicted RBP0.41□□□□□ -2.34
COX6CP3-201ENST00000580869 MAP1AP78559 2803 aaPredicted RBP0.41□□□□□ -2.34
COX6CP3-201ENST00000580869 HIVEP1P15822 2718 aa0.4□□□□□ -2.35
COX6CP3-201ENST00000580869 DEFB110Q30KQ9 67 aa0.4□□□□□ -2.35
COX6CP3-201ENST00000580869 HTTP42858 3142 aa0.4□□□□□ -2.35
COX6CP3-201ENST00000580869 GCC2Q8IWJ2 1684 aa0.4□□□□□ -2.35
COX6CP3-201ENST00000580869 DNAH3Q8TD57 4116 aa0.4□□□□□ -2.35
COX6CP3-201ENST00000580869 FRYQ5TBA9 3013 aa0.39□□□□□ -2.35
COX6CP3-201ENST00000580869 ACACBO00763 2458 aa0.39□□□□□ -2.35
COX6CP3-201ENST00000580869 RPL39P62891 51 aaKnown RBP0.39□□□□□ -2.35
COX6CP3-201ENST00000580869 TEP1Q99973 2627 aaKnown RBP0.39□□□□□ -2.35
COX6CP3-201ENST00000580869 ZANQ9Y493 2812 aa0.39□□□□□ -2.35
COX6CP3-201ENST00000580869 MYO18BQ8IUG5 2567 aa0.39□□□□□ -2.35
COX6CP3-201ENST00000580869 NBEAL1Q6ZS30 2694 aa0.39□□□□□ -2.35
COX6CP3-201ENST00000580869 MT1AP04731 61 aa0.38□□□□□ -2.35
COX6CP3-201ENST00000580869 DNAH9Q9NYC9 4486 aa0.38□□□□□ -2.35
COX6CP3-201ENST00000580869 CUBNO60494 3623 aa0.38□□□□□ -2.35
COX6CP3-201ENST00000580869 USP9XQ93008 2570 aaPredicted RBP0.38□□□□□ -2.35
COX6CP3-201ENST00000580869 HMCN2Q8NDA2 5059 aa0.37□□□□□ -2.35
COX6CP3-201ENST00000580869 HSPG2P98160 4391 aa0.37□□□□□ -2.35
COX6CP3-201ENST00000580869 CCDC168Q8NDH2 2452 aa0.37□□□□□ -2.35
COX6CP3-201ENST00000580869 AKAP9Q99996 3911 aa0.36□□□□□ -2.35
COX6CP3-201ENST00000580869 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
COX6CP3-201ENST00000580869 TLN2Q9Y4G6 2542 aa0.36□□□□□ -2.35
COX6CP3-201ENST00000580869 RANBP2P49792 3224 aaKnown RBP0.36□□□□□ -2.35
COX6CP3-201ENST00000580869 CHD7Q9P2D1 2997 aa0.36□□□□□ -2.35
COX6CP3-201ENST00000580869 USP9YO00507 2555 aaPredicted RBP0.35□□□□□ -2.35
COX6CP3-201ENST00000580869 PKHD1P08F94 4074 aa0.35□□□□□ -2.35
COX6CP3-201ENST00000580869 SPART-AS1P0CW21 52 aa0.35□□□□□ -2.35
COX6CP3-201ENST00000580869 DNAH11Q96DT5 4516 aa0.35□□□□□ -2.35
COX6CP3-201ENST00000580869 ANK3Q12955 4377 aaKnown RBP0.34□□□□□ -2.35
COX6CP3-201ENST00000580869 MGAM2Q2M2H8 2515 aa0.34□□□□□ -2.35
COX6CP3-201ENST00000580869 RPL39LQ96EH5 51 aaKnown RBP0.34□□□□□ -2.36
COX6CP3-201ENST00000580869 TOMM7Q9P0U1 55 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms