RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 TYMSOSQ8TAI1 123 aa4.6□□□□□ -1.67
KPNB1-210ENST00000580573 SIGMAR1Q99720 223 aa4.6□□□□□ -1.67
KPNB1-210ENST00000580573 MYCBP2O75592 4640 aa4.6□□□□□ -1.67
KPNB1-210ENST00000580573 FAT3Q8TDW7 4589 aa4.6□□□□□ -1.67
KPNB1-210ENST00000580573 KRTAP10-8P60410 259 aa4.59□□□□□ -1.67
KPNB1-210ENST00000580573 TNXBP22105 4242 aa4.58□□□□□ -1.68
KPNB1-210ENST00000580573 SPINK1P00995 79 aa4.58□□□□□ -1.68
KPNB1-210ENST00000580573 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
KPNB1-210ENST00000580573 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
KPNB1-210ENST00000580573 SPAG11AQ6PDA7 123 aa4.58□□□□□ -1.68
KPNB1-210ENST00000580573 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
KPNB1-210ENST00000580573 DSCR10P59022 87 aa4.57□□□□□ -1.68
KPNB1-210ENST00000580573 LINC00304Q8N9R0 145 aa4.57□□□□□ -1.68
KPNB1-210ENST00000580573 IGKV3D-7A0A0C4DH55 119 aa4.56□□□□□ -1.68
KPNB1-210ENST00000580573 J3KT08 172 aa4.56□□□□□ -1.68
KPNB1-210ENST00000580573 BPY2O14599 106 aa4.56□□□□□ -1.68
KPNB1-210ENST00000580573 HRCT1Q6UXD1 115 aa4.56□□□□□ -1.68
KPNB1-210ENST00000580573 LIMD2Q9BT23 127 aa4.56□□□□□ -1.68
KPNB1-210ENST00000580573 KRTAP4-5Q9BYR2 181 aa4.56□□□□□ -1.68
KPNB1-210ENST00000580573 IGKV4-1P06312 121 aa4.55□□□□□ -1.68
KPNB1-210ENST00000580573 MT1HL1P0DM35 61 aa4.55□□□□□ -1.68
KPNB1-210ENST00000580573 HIST1H4AP62805 103 aaKnown RBP4.54□□□□□ -1.68
KPNB1-210ENST00000580573 A8MWP4 228 aa4.53□□□□□ -1.68
KPNB1-210ENST00000580573 OXTP01178 125 aa4.53□□□□□ -1.68
KPNB1-210ENST00000580573 SCGB1A1P11684 91 aa4.53□□□□□ -1.68
KPNB1-210ENST00000580573 C1orf195Q5TG92 126 aa4.53□□□□□ -1.68
KPNB1-210ENST00000580573 ABCA13Q86UQ4 5058 aa4.52□□□□□ -1.69
KPNB1-210ENST00000580573 K7EQZ3 153 aa4.52□□□□□ -1.69
KPNB1-210ENST00000580573 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
KPNB1-210ENST00000580573 DMBT1Q9UGM3 2413 aaPredicted RBP4.51□□□□□ -1.69
KPNB1-210ENST00000580573 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
KPNB1-210ENST00000580573 DEFB116Q30KQ4 102 aa4.51□□□□□ -1.69
KPNB1-210ENST00000580573 PRR15Q8IV56 129 aa4.51□□□□□ -1.69
KPNB1-210ENST00000580573 Q8N9L7 120 aa4.51□□□□□ -1.69
KPNB1-210ENST00000580573 A0A087WVE0 104 aa4.5□□□□□ -1.69
KPNB1-210ENST00000580573 KRTAP29-1A8MX34 341 aaPredicted RBP4.5□□□□□ -1.69
KPNB1-210ENST00000580573 A0A1B0GVX0 72 aa4.49□□□□□ -1.69
KPNB1-210ENST00000580573 MMP24-AS1A0A0U1RRL7 71 aa4.47□□□□□ -1.69
KPNB1-210ENST00000580573 FAM236AA0A1B0GUQ0 79 aa4.47□□□□□ -1.69
KPNB1-210ENST00000580573 FAM236BA0A1B0GV22 79 aa4.47□□□□□ -1.69
KPNB1-210ENST00000580573 NDUFB1O75438 58 aa4.47□□□□□ -1.69
KPNB1-210ENST00000580573 MPLKIPQ8TAP9 179 aa4.47□□□□□ -1.69
KPNB1-210ENST00000580573 HCG22E2RYF7 251 aa4.46□□□□□ -1.7
KPNB1-210ENST00000580573 C8orf87E5RJ46 101 aa4.45□□□□□ -1.7
KPNB1-210ENST00000580573 C8orf17Q9NRJ1 99 aa4.45□□□□□ -1.7
KPNB1-210ENST00000580573 IGHV6-1A0A0B4J1U7 121 aa4.43□□□□□ -1.7
KPNB1-210ENST00000580573 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
KPNB1-210ENST00000580573 ATOX1O00244 68 aa4.43□□□□□ -1.7
KPNB1-210ENST00000580573 FP248Q71RG6 208 aaPredicted RBP4.43□□□□□ -1.7
KPNB1-210ENST00000580573 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
KPNB1-210ENST00000580573 CASC2Q6XLA1 102 aa4.42□□□□□ -1.7
KPNB1-210ENST00000580573 TMEM254Q8TBM7 123 aa4.42□□□□□ -1.7
KPNB1-210ENST00000580573 OCR1Q9BZK8 76 aa4.42□□□□□ -1.7
KPNB1-210ENST00000580573 hDV103S1A0JD37 113 aa4.41□□□□□ -1.7
KPNB1-210ENST00000580573 SMIM20Q8N5G0 67 aa4.41□□□□□ -1.7
KPNB1-210ENST00000580573 LINC00313P59037 77 aa4.4□□□□□ -1.71
KPNB1-210ENST00000580573 WFDC13Q8IUB5 93 aa4.4□□□□□ -1.71
KPNB1-210ENST00000580573 Q8N9P0 234 aaPredicted RBP4.4□□□□□ -1.71
KPNB1-210ENST00000580573 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
KPNB1-210ENST00000580573 RETNLBQ9BQ08 111 aa4.39□□□□□ -1.71
KPNB1-210ENST00000580573 MRPL34Q9BQ48 92 aaKnown RBP4.39□□□□□ -1.71
KPNB1-210ENST00000580573 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
KPNB1-210ENST00000580573 TRAV7A0A075B6U4 112 aa4.38□□□□□ -1.71
KPNB1-210ENST00000580573 SERP2Q8N6R1 65 aa4.38□□□□□ -1.71
KPNB1-210ENST00000580573 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
KPNB1-210ENST00000580573 ANAPC13Q9BS18 74 aa4.37□□□□□ -1.71
KPNB1-210ENST00000580573 COX7CP15954 63 aa4.36□□□□□ -1.71
KPNB1-210ENST00000580573 KRTAP13-3Q3SY46 172 aa4.36□□□□□ -1.71
KPNB1-210ENST00000580573 TP53AIP1Q9HCN2 124 aa4.36□□□□□ -1.71
KPNB1-210ENST00000580573 C20orf166-AS1Q96NR2 134 aa4.35□□□□□ -1.71
KPNB1-210ENST00000580573 IGLV7-46A0A075B6I9 117 aa4.34□□□□□ -1.71
KPNB1-210ENST00000580573 A8MUU9 505 aa4.34□□□□□ -1.71
KPNB1-210ENST00000580573 UQCRQO14949 82 aa4.34□□□□□ -1.71
KPNB1-210ENST00000580573 TPRXLQ17RH7 258 aa4.34□□□□□ -1.71
KPNB1-210ENST00000580573 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
KPNB1-210ENST00000580573 KLKP1Q107X0 134 aa4.31□□□□□ -1.72
KPNB1-210ENST00000580573 Q75L30 129 aa4.31□□□□□ -1.72
KPNB1-210ENST00000580573 TRAV22A0A0B4J277 110 aa4.3□□□□□ -1.72
KPNB1-210ENST00000580573 C9orf92A6NGG3 77 aa4.3□□□□□ -1.72
KPNB1-210ENST00000580573 ZCCHC13Q8WW36 166 aaKnown RBP4.3□□□□□ -1.72
KPNB1-210ENST00000580573 A0A0U1RQV1 116 aa4.29□□□□□ -1.72
KPNB1-210ENST00000580573 H3BPC8 53 aa4.29□□□□□ -1.72
KPNB1-210ENST00000580573 CCDC179H3BU77 68 aa4.29□□□□□ -1.72
KPNB1-210ENST00000580573 Q5W150 140 aa4.29□□□□□ -1.72
KPNB1-210ENST00000580573 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
KPNB1-210ENST00000580573 PRR4Q16378 134 aa4.28□□□□□ -1.72
KPNB1-210ENST00000580573 HERC1Q15751 4861 aa4.27□□□□□ -1.73
KPNB1-210ENST00000580573 H0Y9P7 68 aa4.27□□□□□ -1.73
KPNB1-210ENST00000580573 NDUFS5O43920 106 aa4.27□□□□□ -1.73
KPNB1-210ENST00000580573 RPL37P61927 97 aaKnown RBP4.27□□□□□ -1.73
KPNB1-210ENST00000580573 C20orf197Q8N268 126 aa4.26□□□□□ -1.73
KPNB1-210ENST00000580573 LRP2P98164 4655 aa4.26□□□□□ -1.73
KPNB1-210ENST00000580573 MP68P56378 58 aa4.25□□□□□ -1.73
KPNB1-210ENST00000580573 CYSTM1Q9H1C7 97 aa4.25□□□□□ -1.73
KPNB1-210ENST00000580573 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
KPNB1-210ENST00000580573 SEC61BP60468 96 aaKnown RBP4.24□□□□□ -1.73
KPNB1-210ENST00000580573 LPAP08519 4548 aa4.23□□□□□ -1.73
KPNB1-210ENST00000580573 IGKV2-30P06310 120 aa4.23□□□□□ -1.73
KPNB1-210ENST00000580573 LINC00208Q96KT6 92 aa4.23□□□□□ -1.73
KPNB1-210ENST00000580573 HMCN2Q8NDA2 5059 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms