RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 HTTP42858 3142 aa2.85□□□□□ -1.95
NF1-219ENST00000579081 KRTAP13-1Q8IUC0 172 aa2.85□□□□□ -1.95
NF1-219ENST00000579081 CHD7Q9P2D1 2997 aa2.85□□□□□ -1.95
NF1-219ENST00000579081 P0C880 135 aa2.84□□□□□ -1.96
NF1-219ENST00000579081 TEX15Q9BXT5 2789 aa2.83□□□□□ -1.96
NF1-219ENST00000579081 ITPR1Q14643 2758 aa2.82□□□□□ -1.96
NF1-219ENST00000579081 BPTFQ12830 3046 aa2.82□□□□□ -1.96
NF1-219ENST00000579081 VPS13AQ96RL7 3174 aa2.81□□□□□ -1.96
NF1-219ENST00000579081 A0A1B0GVY2 172 aa2.8□□□□□ -1.96
NF1-219ENST00000579081 KRTAP13-2Q52LG2 175 aa2.8□□□□□ -1.96
NF1-219ENST00000579081 Q6ZRN7 208 aaPredicted RBP2.8□□□□□ -1.96
NF1-219ENST00000579081 WDFY4Q6ZS81 3184 aa2.79□□□□□ -1.96
NF1-219ENST00000579081 APCP25054 2843 aa2.79□□□□□ -1.96
NF1-219ENST00000579081 TENM3Q9P273 2699 aa2.78□□□□□ -1.96
NF1-219ENST00000579081 PRO2289Q9P1D8 64 aa2.77□□□□□ -1.97
NF1-219ENST00000579081 FRYLO94915 3013 aa2.77□□□□□ -1.97
NF1-219ENST00000579081 MUC3AQ02505 3323 aa2.77□□□□□ -1.97
NF1-219ENST00000579081 FLNCQ14315 2725 aa2.76□□□□□ -1.97
NF1-219ENST00000579081 FREM2Q5SZK8 3169 aa2.76□□□□□ -1.97
NF1-219ENST00000579081 KRTAP10-10P60014 251 aa2.76□□□□□ -1.97
NF1-219ENST00000579081 CHD9Q3L8U1 2897 aa2.75□□□□□ -1.97
NF1-219ENST00000579081 DSPP15924 2871 aaKnown RBP2.75□□□□□ -1.97
NF1-219ENST00000579081 KRTAP21-3Q3LHN1 58 aa2.74□□□□□ -1.97
NF1-219ENST00000579081 MGAQ8IWI9 3026 aa2.74□□□□□ -1.97
NF1-219ENST00000579081 LAMA1P25391 3075 aa2.72□□□□□ -1.97
NF1-219ENST00000579081 SPTBN5Q9NRC6 3674 aaKnown RBP2.72□□□□□ -1.97
NF1-219ENST00000579081 HIVEP1P15822 2718 aa2.72□□□□□ -1.97
NF1-219ENST00000579081 KRTAP7-1Q8IUC3 87 aa2.71□□□□□ -1.98
NF1-219ENST00000579081 TENM1Q9UKZ4 2725 aa2.71□□□□□ -1.98
NF1-219ENST00000579081 XP32Q5T750 250 aa2.7□□□□□ -1.98
NF1-219ENST00000579081 CELSR3Q9NYQ7 3312 aa2.7□□□□□ -1.98
NF1-219ENST00000579081 TNRC18O15417 2968 aaPredicted RBP2.7□□□□□ -1.98
NF1-219ENST00000579081 NBEAL2Q6ZNJ1 2754 aa2.7□□□□□ -1.98
NF1-219ENST00000579081 KRTAP13-3Q3SY46 172 aa2.69□□□□□ -1.98
NF1-219ENST00000579081 SVEP1Q4LDE5 3571 aa2.69□□□□□ -1.98
NF1-219ENST00000579081 TPRXLQ17RH7 258 aa2.67□□□□□ -1.98
NF1-219ENST00000579081 REV3LO60673 3130 aa2.67□□□□□ -1.98
NF1-219ENST00000579081 DMXL2Q8TDJ6 3036 aa2.66□□□□□ -1.98
NF1-219ENST00000579081 KRTAP13-4Q3LI77 160 aa2.65□□□□□ -1.98
NF1-219ENST00000579081 TGP01266 2768 aa2.65□□□□□ -1.99
NF1-219ENST00000579081 BOD1L1Q8NFC6 3051 aa2.65□□□□□ -1.99
NF1-219ENST00000579081 KALRNO60229 2985 aa2.64□□□□□ -1.99
NF1-219ENST00000579081 DMXL1Q9Y485 3027 aa2.62□□□□□ -1.99
NF1-219ENST00000579081 NBEAQ8NFP9 2946 aa2.62□□□□□ -1.99
NF1-219ENST00000579081 DMDP11532 3685 aa2.61□□□□□ -1.99
NF1-219ENST00000579081 FRYQ5TBA9 3013 aa2.61□□□□□ -1.99
NF1-219ENST00000579081 KRTAP1-4P0C5Y4 121 aa2.6□□□□□ -1.99
NF1-219ENST00000579081 COL12A1Q99715 3063 aa2.6□□□□□ -1.99
NF1-219ENST00000579081 CFAP47Q6ZTR5 3102 aa2.6□□□□□ -1.99
NF1-219ENST00000579081 LOC400499M0QZD8 3231 aa2.6□□□□□ -1.99
NF1-219ENST00000579081 ASPMQ8IZT6 3477 aa2.59□□□□□ -1.99
NF1-219ENST00000579081 SMG1Q96Q15 3661 aaKnown RBP2.59□□□□□ -1.99
NF1-219ENST00000579081 LAMA5O15230 3695 aa2.59□□□□□ -2
NF1-219ENST00000579081 KRTAP12-2P59991 146 aa2.58□□□□□ -2
NF1-219ENST00000579081 ZZEF1O43149 2961 aa2.57□□□□□ -2
NF1-219ENST00000579081 ADGRG4Q8IZF6 3080 aa2.56□□□□□ -2
NF1-219ENST00000579081 CRYBG3Q68DQ2 2970 aa2.55□□□□□ -2
NF1-219ENST00000579081 ATMQ13315 3056 aa2.54□□□□□ -2
NF1-219ENST00000579081 KRTAP15-1Q3LI76 137 aa2.53□□□□□ -2
NF1-219ENST00000579081 TACC2O95359 2948 aa2.53□□□□□ -2
NF1-219ENST00000579081 RYR1P21817 5038 aa2.51□□□□□ -2.01
NF1-219ENST00000579081 DCHS1Q96JQ0 3298 aa2.51□□□□□ -2.01
NF1-219ENST00000579081 NF1P21359 2839 aa2.5□□□□□ -2.01
NF1-219ENST00000579081 MXRA5Q9NR99 2828 aa2.5□□□□□ -2.01
NF1-219ENST00000579081 MT3P25713 68 aa2.5□□□□□ -2.01
NF1-219ENST00000579081 SRRM2Q9UQ35 2752 aaKnown RBP2.49□□□□□ -2.01
NF1-219ENST00000579081 DCHS2Q6V1P9 2916 aa2.49□□□□□ -2.01
NF1-219ENST00000579081 TENM4Q6N022 2769 aa2.48□□□□□ -2.01
NF1-219ENST00000579081 LRBAP50851 2863 aa2.46□□□□□ -2.02
NF1-219ENST00000579081 CELSR2Q9HCU4 2923 aa2.46□□□□□ -2.02
NF1-219ENST00000579081 NBPF19A0A087WUL8 3843 aa2.45□□□□□ -2.02
NF1-219ENST00000579081 ASH1LQ9NR48 2969 aaKnown RBP2.45□□□□□ -2.02
NF1-219ENST00000579081 CUBNO60494 3623 aa2.45□□□□□ -2.02
NF1-219ENST00000579081 PDZD2O15018 2839 aa2.45□□□□□ -2.02
NF1-219ENST00000579081 CRCT1Q9UGL9 99 aa2.45□□□□□ -2.02
NF1-219ENST00000579081 ZANQ9Y493 2812 aa2.44□□□□□ -2.02
NF1-219ENST00000579081 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
NF1-219ENST00000579081 TENM2Q9NT68 2774 aa2.43□□□□□ -2.02
NF1-219ENST00000579081 HYDINQ4G0P3 5121 aa2.42□□□□□ -2.02
NF1-219ENST00000579081 HRNRQ86YZ3 2850 aaPredicted RBP2.42□□□□□ -2.02
NF1-219ENST00000579081 VWFP04275 2813 aa2.39□□□□□ -2.03
NF1-219ENST00000579081 DNHD1Q96M86 4753 aa2.39□□□□□ -2.03
NF1-219ENST00000579081 PCLOQ9Y6V0 5065 aa2.38□□□□□ -2.03
NF1-219ENST00000579081 FBN2P35556 2912 aa2.36□□□□□ -2.03
NF1-219ENST00000579081 CELSR1Q9NYQ6 3014 aa2.36□□□□□ -2.03
NF1-219ENST00000579081 RYR3Q15413 4870 aa2.35□□□□□ -2.03
NF1-219ENST00000579081 ABCA13Q86UQ4 5058 aa2.35□□□□□ -2.03
NF1-219ENST00000579081 MYCBP2O75592 4640 aa2.34□□□□□ -2.03
NF1-219ENST00000579081 PKD1L1Q8TDX9 2849 aa2.34□□□□□ -2.04
NF1-219ENST00000579081 KRTAP10-12P60413 245 aa2.33□□□□□ -2.04
NF1-219ENST00000579081 KRTAP10-6P60371 365 aaPredicted RBP2.33□□□□□ -2.04
NF1-219ENST00000579081 KRTAP10-7P60409 375 aaPredicted RBP2.33□□□□□ -2.04
NF1-219ENST00000579081 ZNF469Q96JG9 3925 aaPredicted RBP2.32□□□□□ -2.04
NF1-219ENST00000579081 KRTAP3-1Q9BYR8 98 aa2.31□□□□□ -2.04
NF1-219ENST00000579081 OTOGQ6ZRI0 2925 aa2.29□□□□□ -2.04
NF1-219ENST00000579081 MEGF8Q7Z7M0 2845 aa2.29□□□□□ -2.04
NF1-219ENST00000579081 EPPK1P58107 5090 aaKnown RBP2.28□□□□□ -2.04
NF1-219ENST00000579081 FBN1P35555 2871 aaKnown RBP2.27□□□□□ -2.05
NF1-219ENST00000579081 CSMD3Q7Z407 3707 aa2.27□□□□□ -2.05
NF1-219ENST00000579081 KRTAP12-3P60328 96 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms