RNA–Protein interactions for RNA: ENST00000572221.5

EDC4-204, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-204ENST00000572221 KRTAP25-1Q3LHN0 102 aa11.31□□□□□ -0.6
EDC4-204ENST00000572221 DNAH14Q0VDD8 3507 aa11.29□□□□□ -0.6
EDC4-204ENST00000572221 LAMA1P25391 3075 aa11.29□□□□□ -0.6
EDC4-204ENST00000572221 REV3LO60673 3130 aa11.29□□□□□ -0.6
EDC4-204ENST00000572221 DMXL2Q8TDJ6 3036 aa11.28□□□□□ -0.6
EDC4-204ENST00000572221 FRYLO94915 3013 aa11.24□□□□□ -0.61
EDC4-204ENST00000572221 LRBAP50851 2863 aa11.23□□□□□ -0.61
EDC4-204ENST00000572221 VCANP13611 3396 aa11.2□□□□□ -0.62
EDC4-204ENST00000572221 KRTAP1-4P0C5Y4 121 aa11.18□□□□□ -0.62
EDC4-204ENST00000572221 ASH1LQ9NR48 2969 aaKnown RBP11.18□□□□□ -0.62
EDC4-204ENST00000572221 TNP1P09430 55 aa11.16□□□□□ -0.62
EDC4-204ENST00000572221 ADGRG4Q8IZF6 3080 aa11.15□□□□□ -0.62
EDC4-204ENST00000572221 CELSR2Q9HCU4 2923 aa11.15□□□□□ -0.62
EDC4-204ENST00000572221 FREM2Q5SZK8 3169 aa11.13□□□□□ -0.63
EDC4-204ENST00000572221 XP32Q5T750 250 aa11.08□□□□□ -0.63
EDC4-204ENST00000572221 ZZEF1O43149 2961 aa11.08□□□□□ -0.64
EDC4-204ENST00000572221 EYSQ5T1H1 3165 aa11.05□□□□□ -0.64
EDC4-204ENST00000572221 CELSR3Q9NYQ7 3312 aa11.04□□□□□ -0.64
EDC4-204ENST00000572221 SPEGQ15772 3267 aa11.03□□□□□ -0.64
EDC4-204ENST00000572221 NBEAQ8NFP9 2946 aa11.03□□□□□ -0.64
EDC4-204ENST00000572221 DCHS2Q6V1P9 2916 aa11.03□□□□□ -0.64
EDC4-204ENST00000572221 CRYBG3Q68DQ2 2970 aa11.02□□□□□ -0.64
EDC4-204ENST00000572221 TPRXLQ17RH7 258 aa10.97□□□□□ -0.65
EDC4-204ENST00000572221 BOD1L1Q8NFC6 3051 aa10.96□□□□□ -0.65
EDC4-204ENST00000572221 KRTAP16-1A8MUX0 517 aa10.95□□□□□ -0.66
EDC4-204ENST00000572221 ZANQ9Y493 2812 aa10.94□□□□□ -0.66
EDC4-204ENST00000572221 TENM3Q9P273 2699 aa10.94□□□□□ -0.66
EDC4-204ENST00000572221 SPTBN5Q9NRC6 3674 aaKnown RBP10.92□□□□□ -0.66
EDC4-204ENST00000572221 PP632Q6XCG6 107 aa10.91□□□□□ -0.66
EDC4-204ENST00000572221 COL6A3P12111 3177 aa10.9□□□□□ -0.66
EDC4-204ENST00000572221 TENM1Q9UKZ4 2725 aa10.81□□□□□ -0.68
EDC4-204ENST00000572221 NDUFAF8A1L188 74 aa10.8□□□□□ -0.68
EDC4-204ENST00000572221 KRTAP10-8P60410 259 aa10.78□□□□□ -0.68
EDC4-204ENST00000572221 MYO15AQ9UKN7 3530 aa10.76□□□□□ -0.69
EDC4-204ENST00000572221 NF1P21359 2839 aa10.75□□□□□ -0.69
EDC4-204ENST00000572221 C10orf95Q9H7T3 257 aa10.75□□□□□ -0.69
EDC4-204ENST00000572221 KRTAP13-3Q3SY46 172 aa10.75□□□□□ -0.69
EDC4-204ENST00000572221 A0A1B0GVY2 172 aa10.7□□□□□ -0.7
EDC4-204ENST00000572221 TNRC18O15417 2968 aaPredicted RBP10.69□□□□□ -0.7
EDC4-204ENST00000572221 H0YAA0 97 aa10.69□□□□□ -0.7
EDC4-204ENST00000572221 HRNRQ86YZ3 2850 aaPredicted RBP10.67□□□□□ -0.7
EDC4-204ENST00000572221 CFAP47Q6ZTR5 3102 aa10.63□□□□□ -0.71
EDC4-204ENST00000572221 TENM2Q9NT68 2774 aa10.63□□□□□ -0.71
EDC4-204ENST00000572221 KRTAP10-10P60014 251 aa10.6□□□□□ -0.71
EDC4-204ENST00000572221 FBN2P35556 2912 aa10.59□□□□□ -0.71
EDC4-204ENST00000572221 PRO2289Q9P1D8 64 aa10.55□□□□□ -0.72
EDC4-204ENST00000572221 USP34Q70CQ2 3546 aa10.55□□□□□ -0.72
EDC4-204ENST00000572221 P0C880 135 aa10.51□□□□□ -0.73
EDC4-204ENST00000572221 LOC400499M0QZD8 3231 aa10.49□□□□□ -0.73
EDC4-204ENST00000572221 MXRA5Q9NR99 2828 aa10.48□□□□□ -0.73
EDC4-204ENST00000572221 DMXL1Q9Y485 3027 aa10.46□□□□□ -0.74
EDC4-204ENST00000572221 TGP01266 2768 aa10.42□□□□□ -0.74
EDC4-204ENST00000572221 CELSR1Q9NYQ6 3014 aa10.4□□□□□ -0.75
EDC4-204ENST00000572221 PKD1L1Q8TDX9 2849 aa10.32□□□□□ -0.76
EDC4-204ENST00000572221 MUC3AQ02505 3323 aa10.32□□□□□ -0.76
EDC4-204ENST00000572221 WDFY3Q8IZQ1 3526 aa10.26□□□□□ -0.77
EDC4-204ENST00000572221 PDZD2O15018 2839 aa10.2□□□□□ -0.78
EDC4-204ENST00000572221 DMDP11532 3685 aa10.18□□□□□ -0.78
EDC4-204ENST00000572221 VWFP04275 2813 aa10.1□□□□□ -0.79
EDC4-204ENST00000572221 ASPMQ8IZT6 3477 aa10.07□□□□□ -0.8
EDC4-204ENST00000572221 KRTAP12-2P59991 146 aa10.04□□□□□ -0.8
EDC4-204ENST00000572221 LAMA5O15230 3695 aa10.03□□□□□ -0.8
EDC4-204ENST00000572221 KRTAP13-4Q3LI77 160 aa10.01□□□□□ -0.81
EDC4-204ENST00000572221 DCHS1Q96JQ0 3298 aa9.97□□□□□ -0.81
EDC4-204ENST00000572221 KRTAP12-1P59990 96 aa9.94□□□□□ -0.82
EDC4-204ENST00000572221 RELNP78509 3460 aa9.93□□□□□ -0.82
EDC4-204ENST00000572221 KRTAP3-1Q9BYR8 98 aa9.93□□□□□ -0.82
EDC4-204ENST00000572221 ZFHX4Q86UP3 3567 aa9.93□□□□□ -0.82
EDC4-204ENST00000572221 SRRM2Q9UQ35 2752 aaKnown RBP9.76□□□□□ -0.85
EDC4-204ENST00000572221 FBN1P35555 2871 aaKnown RBP9.76□□□□□ -0.85
EDC4-204ENST00000572221 OTOGQ6ZRI0 2925 aa9.75□□□□□ -0.85
EDC4-204ENST00000572221 SMG1Q96Q15 3661 aaKnown RBP9.7□□□□□ -0.86
EDC4-204ENST00000572221 KRTAP10-6P60371 365 aaPredicted RBP9.67□□□□□ -0.86
EDC4-204ENST00000572221 FBN3Q75N90 2809 aa9.63□□□□□ -0.87
EDC4-204ENST00000572221 MT1HL1P0DM35 61 aa9.62□□□□□ -0.87
EDC4-204ENST00000572221 CSMD1Q96PZ7 3565 aa9.61□□□□□ -0.87
EDC4-204ENST00000572221 KRTAP15-1Q3LI76 137 aa9.53□□□□□ -0.88
EDC4-204ENST00000572221 MEGF8Q7Z7M0 2845 aa9.49□□□□□ -0.89
EDC4-204ENST00000572221 SVEP1Q4LDE5 3571 aa9.43□□□□□ -0.9
EDC4-204ENST00000572221 NBPF19A0A087WUL8 3843 aa9.42□□□□□ -0.9
EDC4-204ENST00000572221 COL7A1Q02388 2944 aa9.39□□□□□ -0.91
EDC4-204ENST00000572221 KRTAP10-4P60372 401 aaPredicted RBP9.35□□□□□ -0.91
EDC4-204ENST00000572221 SPENQ96T58 3664 aaKnown RBP9.34□□□□□ -0.91
EDC4-204ENST00000572221 ZFHX3Q15911 3703 aa9.33□□□□□ -0.92
EDC4-204ENST00000572221 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
EDC4-204ENST00000572221 ANK3Q12955 4377 aaKnown RBP9.31□□□□□ -0.92
EDC4-204ENST00000572221 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
EDC4-204ENST00000572221 BSNQ9UPA5 3926 aa9.27□□□□□ -0.92
EDC4-204ENST00000572221 KRTAP10-12P60413 245 aa9.19□□□□□ -0.94
EDC4-204ENST00000572221 KRTAP4-5Q9BYR2 181 aa9.15□□□□□ -0.94
EDC4-204ENST00000572221 CUBNO60494 3623 aa9.14□□□□□ -0.95
EDC4-204ENST00000572221 CSMD2Q7Z408 3487 aa9.06□□□□□ -0.96
EDC4-204ENST00000572221 KRTAP23-1A1A580 65 aa9□□□□□ -0.97
EDC4-204ENST00000572221 INE1O15225 51 aa8.97□□□□□ -0.97
EDC4-204ENST00000572221 TRRAPQ9Y4A5 3859 aa8.96□□□□□ -0.98
EDC4-204ENST00000572221 KRTAP12-3P60328 96 aa8.94□□□□□ -0.98
EDC4-204ENST00000572221 HUWE1Q7Z6Z7 4374 aaKnown RBP8.83□□□□□ -1
EDC4-204ENST00000572221 VPS13CQ709C8 3753 aa8.81□□□□□ -1
EDC4-204ENST00000572221 CRCT1Q9UGL9 99 aa8.8□□□□□ -1
EDC4-204ENST00000572221 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms