RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 ACYP2P14621 99 aa9.22□□□□□ -0.93
SMG6-207ENST00000570756 PRR26Q8N8Z3 221 aa9.22□□□□□ -0.93
SMG6-207ENST00000570756 LYSTQ99698 3801 aa9.2□□□□□ -0.94
SMG6-207ENST00000570756 A0A087X002 238 aa9.18□□□□□ -0.94
SMG6-207ENST00000570756 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
SMG6-207ENST00000570756 WWC2-AS2Q96NR7 200 aa9.18□□□□□ -0.94
SMG6-207ENST00000570756 PANO1I0J062 215 aa9.17□□□□□ -0.94
SMG6-207ENST00000570756 LINC00313P59037 77 aa9.16□□□□□ -0.94
SMG6-207ENST00000570756 DNAH7Q8WXX0 4024 aa9.15□□□□□ -0.94
SMG6-207ENST00000570756 KRTAP13-3Q3SY46 172 aa9.15□□□□□ -0.94
SMG6-207ENST00000570756 Q5W150 140 aa9.14□□□□□ -0.95
SMG6-207ENST00000570756 SPACA4Q8TDM5 124 aa9.14□□□□□ -0.95
SMG6-207ENST00000570756 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
SMG6-207ENST00000570756 DMAC1Q96GE9 116 aa9.11□□□□□ -0.95
SMG6-207ENST00000570756 STARD9Q9P2P6 4700 aa9.1□□□□□ -0.95
SMG6-207ENST00000570756 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.1□□□□□ -0.95
SMG6-207ENST00000570756 A0A1B0GU69 56 aa9.1□□□□□ -0.95
SMG6-207ENST00000570756 SPINK6Q6UWN8 80 aa9.09□□□□□ -0.95
SMG6-207ENST00000570756 PLA2G1BP04054 148 aaKnown RBP9.09□□□□□ -0.96
SMG6-207ENST00000570756 ALMS1Q8TCU4 4167 aa9.08□□□□□ -0.96
SMG6-207ENST00000570756 C8orf87E5RJ46 101 aa9.07□□□□□ -0.96
SMG6-207ENST00000570756 NBDYA0A0U1RRE5 68 aa9.06□□□□□ -0.96
SMG6-207ENST00000570756 PLECQ15149 4684 aaKnown RBP9.06□□□□□ -0.96
SMG6-207ENST00000570756 IGLV5-52A0A0A0MRZ9 124 aa9.06□□□□□ -0.96
SMG6-207ENST00000570756 PRAC1Q96KF2 57 aa9.06□□□□□ -0.96
SMG6-207ENST00000570756 ZNF861PO60384 105 aa9.05□□□□□ -0.96
SMG6-207ENST00000570756 ANAPC11Q9NYG5 84 aa9.05□□□□□ -0.96
SMG6-207ENST00000570756 PSORS1C2Q9UIG4 136 aa9.05□□□□□ -0.96
SMG6-207ENST00000570756 SPATA8Q6RVD6 105 aa9.05□□□□□ -0.96
SMG6-207ENST00000570756 Q6ZRN7 208 aaPredicted RBP9.04□□□□□ -0.96
SMG6-207ENST00000570756 FAM229AH3BQW9 127 aa9.02□□□□□ -0.97
SMG6-207ENST00000570756 DYNC2H1Q8NCM8 4307 aaKnown RBP9□□□□□ -0.97
SMG6-207ENST00000570756 UQCR11O14957 56 aa9□□□□□ -0.97
SMG6-207ENST00000570756 RTL8CO15255 209 aa8.99□□□□□ -0.97
SMG6-207ENST00000570756 MIR22HGQ0VDD5 57 aa8.99□□□□□ -0.97
SMG6-207ENST00000570756 LINC01554Q52M75 96 aa8.98□□□□□ -0.97
SMG6-207ENST00000570756 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
SMG6-207ENST00000570756 CIRBP-AS1Q8TBR5 109 aa8.97□□□□□ -0.97
SMG6-207ENST00000570756 IGKV2-30P06310 120 aa8.95□□□□□ -0.98
SMG6-207ENST00000570756 A0A087WTM6 91 aa8.93□□□□□ -0.98
SMG6-207ENST00000570756 SSBP3-AS1Q7Z2R9 100 aa8.92□□□□□ -0.98
SMG6-207ENST00000570756 KMT2AQ03164 3969 aa8.91□□□□□ -0.98
SMG6-207ENST00000570756 RETNLBQ9BQ08 111 aa8.89□□□□□ -0.99
SMG6-207ENST00000570756 DNAH8Q96JB1 4490 aa8.88□□□□□ -0.99
SMG6-207ENST00000570756 NUPR2A6NF83 97 aa8.88□□□□□ -0.99
SMG6-207ENST00000570756 IGLV7-43P04211 117 aa8.88□□□□□ -0.99
SMG6-207ENST00000570756 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
SMG6-207ENST00000570756 VPS13DQ5THJ4 4388 aa8.85□□□□□ -0.99
SMG6-207ENST00000570756 FRAS1Q86XX4 4008 aa8.85□□□□□ -0.99
SMG6-207ENST00000570756 HECTD4Q9Y4D8 3996 aa8.82□□□□□ -1
SMG6-207ENST00000570756 HYDINQ4G0P3 5121 aa8.8□□□□□ -1
SMG6-207ENST00000570756 KMT2CQ8NEZ4 4911 aaKnown RBP8.79□□□□□ -1
SMG6-207ENST00000570756 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
SMG6-207ENST00000570756 CSAG1Q6PB30 78 aa8.78□□□□□ -1
SMG6-207ENST00000570756 KRTAP16-1A8MUX0 517 aa8.78□□□□□ -1
SMG6-207ENST00000570756 DNAH2Q9P225 4427 aa8.76□□□□□ -1.01
SMG6-207ENST00000570756 SACSQ9NZJ4 4579 aa8.75□□□□□ -1.01
SMG6-207ENST00000570756 LY6G6CO95867 125 aa8.72□□□□□ -1.01
SMG6-207ENST00000570756 DNAH17Q9UFH2 4485 aa8.69□□□□□ -1.02
SMG6-207ENST00000570756 KRTAP13-2Q52LG2 175 aa8.66□□□□□ -1.02
SMG6-207ENST00000570756 SPINK1P00995 79 aa8.65□□□□□ -1.02
SMG6-207ENST00000570756 H3BS24 57 aa8.65□□□□□ -1.02
SMG6-207ENST00000570756 C1orf134Q5TEV5 83 aa8.62□□□□□ -1.03
SMG6-207ENST00000570756 DNAH6Q9C0G6 4158 aa8.61□□□□□ -1.03
SMG6-207ENST00000570756 RYR3Q15413 4870 aa8.61□□□□□ -1.03
SMG6-207ENST00000570756 RYR2Q92736 4967 aa8.6□□□□□ -1.03
SMG6-207ENST00000570756 Q8N1X5 172 aa8.59□□□□□ -1.03
SMG6-207ENST00000570756 A8MUU9 505 aa8.57□□□□□ -1.04
SMG6-207ENST00000570756 FAT2Q9NYQ8 4349 aa8.57□□□□□ -1.04
SMG6-207ENST00000570756 Q6ZSA8 131 aa8.55□□□□□ -1.04
SMG6-207ENST00000570756 H0YAA0 97 aa8.55□□□□□ -1.04
SMG6-207ENST00000570756 PKHD1P08F94 4074 aa8.53□□□□□ -1.04
SMG6-207ENST00000570756 KRTAP25-1Q3LHN0 102 aa8.52□□□□□ -1.05
SMG6-207ENST00000570756 DNAH11Q96DT5 4516 aa8.5□□□□□ -1.05
SMG6-207ENST00000570756 PKD1P98161 4303 aa8.5□□□□□ -1.05
SMG6-207ENST00000570756 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
SMG6-207ENST00000570756 LINC00304Q8N9R0 145 aa8.49□□□□□ -1.05
SMG6-207ENST00000570756 A0A1B0GU33 70 aa8.49□□□□□ -1.05
SMG6-207ENST00000570756 TYMSOSQ8TAI1 123 aa8.45□□□□□ -1.06
SMG6-207ENST00000570756 KRTAP10-2P60368 255 aa8.44□□□□□ -1.06
SMG6-207ENST00000570756 H1FX-AS1Q4G0G2 97 aa8.43□□□□□ -1.06
SMG6-207ENST00000570756 DNAH5Q8TE73 4624 aa8.43□□□□□ -1.06
SMG6-207ENST00000570756 ROMO1P60602 79 aa8.41□□□□□ -1.06
SMG6-207ENST00000570756 K7ERS5 55 aa8.39□□□□□ -1.07
SMG6-207ENST00000570756 RPS29P62273 56 aaKnown RBP8.37□□□□□ -1.07
SMG6-207ENST00000570756 KRTAP10-1P60331 282 aa8.35□□□□□ -1.07
SMG6-207ENST00000570756 LRP1BQ9NZR2 4599 aa8.32□□□□□ -1.08
SMG6-207ENST00000570756 KRTAP3-1Q9BYR8 98 aa8.31□□□□□ -1.08
SMG6-207ENST00000570756 EPPK1P58107 5090 aaKnown RBP8.31□□□□□ -1.08
SMG6-207ENST00000570756 C20orf166-AS1Q96NR2 134 aa8.3□□□□□ -1.08
SMG6-207ENST00000570756 DYNC1H1Q14204 4646 aaKnown RBP8.29□□□□□ -1.08
SMG6-207ENST00000570756 VPS13BQ7Z7G8 4022 aa8.26□□□□□ -1.09
SMG6-207ENST00000570756 COX6B2Q6YFQ2 88 aa8.24□□□□□ -1.09
SMG6-207ENST00000570756 A0A1B0GVY2 172 aa8.23□□□□□ -1.09
SMG6-207ENST00000570756 C9orf92A6NGG3 77 aa8.23□□□□□ -1.09
SMG6-207ENST00000570756 CRIPTQ9P021 101 aa8.2□□□□□ -1.1
SMG6-207ENST00000570756 FLG2Q5D862 2391 aaPredicted RBP8.19□□□□□ -1.1
SMG6-207ENST00000570756 APOBP04114 4563 aaKnown RBP8.18□□□□□ -1.1
SMG6-207ENST00000570756 FAT1Q14517 4588 aa8.14□□□□□ -1.11
SMG6-207ENST00000570756 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms