RNA–Protein interactions for RNA: ENST00000569796.1

E4F1-209, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 5,931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-209ENST00000569796 ITPR1Q14643 2758 aa9.36□□□□□ -0.91
E4F1-209ENST00000569796 FRYLO94915 3013 aa9.36□□□□□ -0.91
E4F1-209ENST00000569796 ATMQ13315 3056 aa9.35□□□□□ -0.91
E4F1-209ENST00000569796 BOD1L1Q8NFC6 3051 aa9.33□□□□□ -0.92
E4F1-209ENST00000569796 NSD1Q96L73 2696 aaPredicted RBP9.33□□□□□ -0.92
E4F1-209ENST00000569796 CFAP47Q6ZTR5 3102 aa9.32□□□□□ -0.92
E4F1-209ENST00000569796 DMXL2Q8TDJ6 3036 aa9.32□□□□□ -0.92
E4F1-209ENST00000569796 COL12A1Q99715 3063 aa9.31□□□□□ -0.92
E4F1-209ENST00000569796 FLNCQ14315 2725 aa9.3□□□□□ -0.92
E4F1-209ENST00000569796 KALRNO60229 2985 aa9.28□□□□□ -0.92
E4F1-209ENST00000569796 KRTAP21-3Q3LHN1 58 aa9.28□□□□□ -0.92
E4F1-209ENST00000569796 SPTBN5Q9NRC6 3674 aaKnown RBP9.23□□□□□ -0.93
E4F1-209ENST00000569796 SPEGQ15772 3267 aa9.21□□□□□ -0.93
E4F1-209ENST00000569796 EYSQ5T1H1 3165 aa9.18□□□□□ -0.94
E4F1-209ENST00000569796 PP632Q6XCG6 107 aa9.18□□□□□ -0.94
E4F1-209ENST00000569796 LRBAP50851 2863 aa9.17□□□□□ -0.94
E4F1-209ENST00000569796 UTP20O75691 2785 aaKnown RBP9.17□□□□□ -0.94
E4F1-209ENST00000569796 ADGRG4Q8IZF6 3080 aa9.17□□□□□ -0.94
E4F1-209ENST00000569796 HIVEP1P15822 2718 aa9.16□□□□□ -0.94
E4F1-209ENST00000569796 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
E4F1-209ENST00000569796 KRTAP10-8P60410 259 aa9.13□□□□□ -0.95
E4F1-209ENST00000569796 XP32Q5T750 250 aa9.08□□□□□ -0.96
E4F1-209ENST00000569796 P0C880 135 aa9.08□□□□□ -0.96
E4F1-209ENST00000569796 USP34Q70CQ2 3546 aa9.07□□□□□ -0.96
E4F1-209ENST00000569796 ASH1LQ9NR48 2969 aaKnown RBP9.06□□□□□ -0.96
E4F1-209ENST00000569796 KMT2BQ9UMN6 2715 aaPredicted RBP9.05□□□□□ -0.96
E4F1-209ENST00000569796 NBEAQ8NFP9 2946 aa9.05□□□□□ -0.96
E4F1-209ENST00000569796 TENM4Q6N022 2769 aa9.04□□□□□ -0.96
E4F1-209ENST00000569796 TNRC18O15417 2968 aaPredicted RBP9.03□□□□□ -0.96
E4F1-209ENST00000569796 APCP25054 2843 aa9.02□□□□□ -0.97
E4F1-209ENST00000569796 ZZEF1O43149 2961 aa9.01□□□□□ -0.97
E4F1-209ENST00000569796 H0YAA0 97 aa9.01□□□□□ -0.97
E4F1-209ENST00000569796 KRTAP1-4P0C5Y4 121 aa9□□□□□ -0.97
E4F1-209ENST00000569796 DMXL1Q9Y485 3027 aa8.96□□□□□ -0.97
E4F1-209ENST00000569796 CELSR2Q9HCU4 2923 aa8.94□□□□□ -0.98
E4F1-209ENST00000569796 MYO15AQ9UKN7 3530 aa8.93□□□□□ -0.98
E4F1-209ENST00000569796 KRTAP10-10P60014 251 aa8.93□□□□□ -0.98
E4F1-209ENST00000569796 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
E4F1-209ENST00000569796 NIPBLQ6KC79 2804 aaeCLIP8.88□□□□□ -0.99
E4F1-209ENST00000569796 PRO2289Q9P1D8 64 aa8.86□□□□□ -0.99
E4F1-209ENST00000569796 DCHS2Q6V1P9 2916 aa8.83□□□□□ -1
E4F1-209ENST00000569796 ZANQ9Y493 2812 aa8.82□□□□□ -1
E4F1-209ENST00000569796 LOC400499M0QZD8 3231 aa8.77□□□□□ -1.01
E4F1-209ENST00000569796 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.01
E4F1-209ENST00000569796 HRNRQ86YZ3 2850 aaPredicted RBP8.67□□□□□ -1.02
E4F1-209ENST00000569796 NF1P21359 2839 aa8.62□□□□□ -1.03
E4F1-209ENST00000569796 RELNP78509 3460 aa8.61□□□□□ -1.03
E4F1-209ENST00000569796 FBN2P35556 2912 aa8.61□□□□□ -1.03
E4F1-209ENST00000569796 WDFY3Q8IZQ1 3526 aa8.61□□□□□ -1.03
E4F1-209ENST00000569796 ASPMQ8IZT6 3477 aa8.59□□□□□ -1.03
E4F1-209ENST00000569796 TENM1Q9UKZ4 2725 aa8.54□□□□□ -1.04
E4F1-209ENST00000569796 DCHS1Q96JQ0 3298 aa8.52□□□□□ -1.05
E4F1-209ENST00000569796 TENM3Q9P273 2699 aa8.51□□□□□ -1.05
E4F1-209ENST00000569796 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
E4F1-209ENST00000569796 LAMA5O15230 3695 aa8.47□□□□□ -1.05
E4F1-209ENST00000569796 NBPF19A0A087WUL8 3843 aa8.46□□□□□ -1.06
E4F1-209ENST00000569796 KRTAP12-2P59991 146 aa8.43□□□□□ -1.06
E4F1-209ENST00000569796 CELSR1Q9NYQ6 3014 aa8.42□□□□□ -1.06
E4F1-209ENST00000569796 PKD1L1Q8TDX9 2849 aa8.41□□□□□ -1.06
E4F1-209ENST00000569796 ZFHX4Q86UP3 3567 aa8.38□□□□□ -1.07
E4F1-209ENST00000569796 DMDP11532 3685 aa8.36□□□□□ -1.07
E4F1-209ENST00000569796 MXRA5Q9NR99 2828 aa8.35□□□□□ -1.07
E4F1-209ENST00000569796 KRTAP13-4Q3LI77 160 aa8.31□□□□□ -1.08
E4F1-209ENST00000569796 TGP01266 2768 aa8.29□□□□□ -1.08
E4F1-209ENST00000569796 VWFP04275 2813 aa8.27□□□□□ -1.08
E4F1-209ENST00000569796 ZFHX3Q15911 3703 aa8.26□□□□□ -1.09
E4F1-209ENST00000569796 MUC3AQ02505 3323 aa8.25□□□□□ -1.09
E4F1-209ENST00000569796 KRTAP12-1P59990 96 aa8.21□□□□□ -1.1
E4F1-209ENST00000569796 PDZD2O15018 2839 aa8.11□□□□□ -1.11
E4F1-209ENST00000569796 SMG1Q96Q15 3661 aaKnown RBP8.11□□□□□ -1.11
E4F1-209ENST00000569796 CSMD1Q96PZ7 3565 aa8.1□□□□□ -1.11
E4F1-209ENST00000569796 KRTAP15-1Q3LI76 137 aa8.09□□□□□ -1.11
E4F1-209ENST00000569796 INE1O15225 51 aa8.01□□□□□ -1.13
E4F1-209ENST00000569796 KRTAP3-1Q9BYR8 98 aa7.99□□□□□ -1.13
E4F1-209ENST00000569796 CSMD2Q7Z408 3487 aa7.99□□□□□ -1.13
E4F1-209ENST00000569796 FBN1P35555 2871 aaKnown RBP7.99□□□□□ -1.13
E4F1-209ENST00000569796 OTOGQ6ZRI0 2925 aa7.95□□□□□ -1.14
E4F1-209ENST00000569796 SVEP1Q4LDE5 3571 aa7.93□□□□□ -1.14
E4F1-209ENST00000569796 CUBNO60494 3623 aa7.92□□□□□ -1.14
E4F1-209ENST00000569796 SRRM2Q9UQ35 2752 aaKnown RBP7.89□□□□□ -1.15
E4F1-209ENST00000569796 ANK3Q12955 4377 aaKnown RBP7.81□□□□□ -1.16
E4F1-209ENST00000569796 SPENQ96T58 3664 aaKnown RBP7.79□□□□□ -1.16
E4F1-209ENST00000569796 KRTAP10-6P60371 365 aaPredicted RBP7.78□□□□□ -1.16
E4F1-209ENST00000569796 CRCT1Q9UGL9 99 aa7.76□□□□□ -1.17
E4F1-209ENST00000569796 BSNQ9UPA5 3926 aa7.7□□□□□ -1.18
E4F1-209ENST00000569796 MT1HL1P0DM35 61 aa7.68□□□□□ -1.18
E4F1-209ENST00000569796 TRRAPQ9Y4A5 3859 aa7.65□□□□□ -1.18
E4F1-209ENST00000569796 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
E4F1-209ENST00000569796 KRTAP10-12P60413 245 aa7.64□□□□□ -1.19
E4F1-209ENST00000569796 KRTAP4-5Q9BYR2 181 aa7.52□□□□□ -1.21
E4F1-209ENST00000569796 MEGF8Q7Z7M0 2845 aa7.51□□□□□ -1.21
E4F1-209ENST00000569796 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
E4F1-209ENST00000569796 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
E4F1-209ENST00000569796 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
E4F1-209ENST00000569796 KRTAP12-3P60328 96 aa7.38□□□□□ -1.23
E4F1-209ENST00000569796 HUWE1Q7Z6Z7 4374 aaKnown RBP7.36□□□□□ -1.23
E4F1-209ENST00000569796 KRTAP10-4P60372 401 aaPredicted RBP7.32□□□□□ -1.24
E4F1-209ENST00000569796 VPS13CQ709C8 3753 aa7.3□□□□□ -1.24
E4F1-209ENST00000569796 LCE3AQ5TA76 89 aa7.29□□□□□ -1.24
E4F1-209ENST00000569796 KRTAP23-1A1A580 65 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms