RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 DNAH3Q8TD57 4116 aa14.73□□□□□ -0.05
FANCA-221ENST00000566889 SPACA4Q8TDM5 124 aa14.72□□□□□ -0.05
FANCA-221ENST00000566889 MIR22HGQ0VDD5 57 aa14.7□□□□□ -0.06
FANCA-221ENST00000566889 UQCR11O14957 56 aa14.7□□□□□ -0.06
FANCA-221ENST00000566889 SPINK6Q6UWN8 80 aa14.67□□□□□ -0.06
FANCA-221ENST00000566889 CMYA5Q8N3K9 4069 aa14.66□□□□□ -0.06
FANCA-221ENST00000566889 LYSTQ99698 3801 aa14.65□□□□□ -0.06
FANCA-221ENST00000566889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.65□□□□□ -0.06
FANCA-221ENST00000566889 APLNQ9ULZ1 77 aa14.64□□□□□ -0.07
FANCA-221ENST00000566889 FAM229AH3BQW9 127 aa14.63□□□□□ -0.07
FANCA-221ENST00000566889 FBN1P35555 2871 aaKnown RBP14.63□□□□□ -0.07
FANCA-221ENST00000566889 DNAH9Q9NYC9 4486 aa14.62□□□□□ -0.07
FANCA-221ENST00000566889 IGLV5-52A0A0A0MRZ9 124 aa14.61□□□□□ -0.07
FANCA-221ENST00000566889 ZNF861PO60384 105 aa14.6□□□□□ -0.07
FANCA-221ENST00000566889 ANAPC11Q9NYG5 84 aa14.6□□□□□ -0.07
FANCA-221ENST00000566889 HUWE1Q7Z6Z7 4374 aaKnown RBP14.6□□□□□ -0.07
FANCA-221ENST00000566889 PSORS1C2Q9UIG4 136 aa14.59□□□□□ -0.07
FANCA-221ENST00000566889 KRTAP24-1Q3LI83 254 aa14.57□□□□□ -0.08
FANCA-221ENST00000566889 IGKV2-30P06310 120 aa14.57□□□□□ -0.08
FANCA-221ENST00000566889 CSMD3Q7Z407 3707 aa14.56□□□□□ -0.08
FANCA-221ENST00000566889 Q6ZRN7 208 aaPredicted RBP14.54□□□□□ -0.08
FANCA-221ENST00000566889 NBDYA0A0U1RRE5 68 aa14.54□□□□□ -0.08
FANCA-221ENST00000566889 RETNLBQ9BQ08 111 aa14.54□□□□□ -0.08
FANCA-221ENST00000566889 CIRBP-AS1Q8TBR5 109 aa14.46□□□□□ -0.1
FANCA-221ENST00000566889 CSAG1Q6PB30 78 aa14.43□□□□□ -0.1
FANCA-221ENST00000566889 SSBP3-AS1Q7Z2R9 100 aa14.42□□□□□ -0.1
FANCA-221ENST00000566889 NBEAL1Q6ZS30 2694 aa14.4□□□□□ -0.1
FANCA-221ENST00000566889 COL7A1Q02388 2944 aa14.4□□□□□ -0.1
FANCA-221ENST00000566889 H3BS24 57 aa14.39□□□□□ -0.11
FANCA-221ENST00000566889 NOTCH1P46531 2555 aa14.39□□□□□ -0.11
FANCA-221ENST00000566889 IGLV7-43P04211 117 aa14.35□□□□□ -0.11
FANCA-221ENST00000566889 A0A087WTM6 91 aa14.33□□□□□ -0.12
FANCA-221ENST00000566889 STAB1Q9NY15 2570 aa14.32□□□□□ -0.12
FANCA-221ENST00000566889 COL6A5A8TX70 2615 aa14.32□□□□□ -0.12
FANCA-221ENST00000566889 DNAH8Q96JB1 4490 aa14.32□□□□□ -0.12
FANCA-221ENST00000566889 DYNC2H1Q8NCM8 4307 aaKnown RBP14.28□□□□□ -0.12
FANCA-221ENST00000566889 IGKV2D-30A0A075B6S6 120 aa14.27□□□□□ -0.12
FANCA-221ENST00000566889 KRTAP16-1A8MUX0 517 aa14.26□□□□□ -0.13
FANCA-221ENST00000566889 NUPR2A6NF83 97 aa14.18□□□□□ -0.14
FANCA-221ENST00000566889 STAB2Q8WWQ8 2551 aa14.17□□□□□ -0.14
FANCA-221ENST00000566889 DNAH7Q8WXX0 4024 aa14.15□□□□□ -0.14
FANCA-221ENST00000566889 FRAS1Q86XX4 4008 aa14.13□□□□□ -0.15
FANCA-221ENST00000566889 LY6G6CO95867 125 aa14.11□□□□□ -0.15
FANCA-221ENST00000566889 A8MUU9 505 aa14.06□□□□□ -0.16
FANCA-221ENST00000566889 HECTD4Q9Y4D8 3996 aa14.04□□□□□ -0.16
FANCA-221ENST00000566889 SPINK1P00995 79 aa14.02□□□□□ -0.16
FANCA-221ENST00000566889 KRTAP25-1Q3LHN0 102 aa14.02□□□□□ -0.16
FANCA-221ENST00000566889 C1orf134Q5TEV5 83 aa14.01□□□□□ -0.17
FANCA-221ENST00000566889 PLECQ15149 4684 aaKnown RBP14.01□□□□□ -0.17
FANCA-221ENST00000566889 KRTAP13-2Q52LG2 175 aa13.99□□□□□ -0.17
FANCA-221ENST00000566889 Q6ZSA8 131 aa13.98□□□□□ -0.17
FANCA-221ENST00000566889 H0YAA0 97 aa13.96□□□□□ -0.17
FANCA-221ENST00000566889 DNAH17Q9UFH2 4485 aa13.94□□□□□ -0.18
FANCA-221ENST00000566889 LINC00304Q8N9R0 145 aa13.92□□□□□ -0.18
FANCA-221ENST00000566889 VPS13DQ5THJ4 4388 aa13.91□□□□□ -0.18
FANCA-221ENST00000566889 Q8N1X5 172 aa13.91□□□□□ -0.18
FANCA-221ENST00000566889 ROMO1P60602 79 aa13.88□□□□□ -0.19
FANCA-221ENST00000566889 A0A1B0GU33 70 aa13.83□□□□□ -0.2
FANCA-221ENST00000566889 MEGF8Q7Z7M0 2845 aa13.8□□□□□ -0.2
FANCA-221ENST00000566889 TYMSOSQ8TAI1 123 aa13.77□□□□□ -0.21
FANCA-221ENST00000566889 MGAM2Q2M2H8 2515 aa13.76□□□□□ -0.21
FANCA-221ENST00000566889 H1FX-AS1Q4G0G2 97 aa13.76□□□□□ -0.21
FANCA-221ENST00000566889 TGP01266 2768 aa13.75□□□□□ -0.21
FANCA-221ENST00000566889 KRTAP1-4P0C5Y4 121 aa13.7□□□□□ -0.22
FANCA-221ENST00000566889 DNAH2Q9P225 4427 aa13.68□□□□□ -0.22
FANCA-221ENST00000566889 FBN3Q75N90 2809 aa13.67□□□□□ -0.22
FANCA-221ENST00000566889 K7ERS5 55 aa13.67□□□□□ -0.22
FANCA-221ENST00000566889 PRKDCP78527 4128 aaKnown RBP13.62□□□□□ -0.23
FANCA-221ENST00000566889 STARD9Q9P2P6 4700 aa13.61□□□□□ -0.23
FANCA-221ENST00000566889 DNAH11Q96DT5 4516 aa13.57□□□□□ -0.24
FANCA-221ENST00000566889 KRTAP3-1Q9BYR8 98 aa13.53□□□□□ -0.24
FANCA-221ENST00000566889 KRTAP10-2P60368 255 aa13.52□□□□□ -0.25
FANCA-221ENST00000566889 KMT2AQ03164 3969 aa13.51□□□□□ -0.25
FANCA-221ENST00000566889 RPS29P62273 56 aaKnown RBP13.51□□□□□ -0.25
FANCA-221ENST00000566889 C20orf166-AS1Q96NR2 134 aa13.43□□□□□ -0.26
FANCA-221ENST00000566889 COX6B2Q6YFQ2 88 aa13.43□□□□□ -0.26
FANCA-221ENST00000566889 P0C880 135 aa13.41□□□□□ -0.26
FANCA-221ENST00000566889 CRIPTQ9P021 101 aa13.41□□□□□ -0.26
FANCA-221ENST00000566889 DNAH6Q9C0G6 4158 aa13.4□□□□□ -0.26
FANCA-221ENST00000566889 KRTAP10-1P60331 282 aa13.39□□□□□ -0.27
FANCA-221ENST00000566889 DNAH5Q8TE73 4624 aa13.38□□□□□ -0.27
FANCA-221ENST00000566889 LRP1BQ9NZR2 4599 aa13.32□□□□□ -0.28
FANCA-221ENST00000566889 RPL37P61927 97 aaKnown RBP13.26□□□□□ -0.29
FANCA-221ENST00000566889 FLG2Q5D862 2391 aaPredicted RBP13.25□□□□□ -0.29
FANCA-221ENST00000566889 C9orf92A6NGG3 77 aa13.24□□□□□ -0.29
FANCA-221ENST00000566889 SPINT4Q6UDR6 99 aa13.16□□□□□ -0.3
FANCA-221ENST00000566889 VPS13BQ7Z7G8 4022 aa13.14□□□□□ -0.31
FANCA-221ENST00000566889 TPRXLQ17RH7 258 aa13.11□□□□□ -0.31
FANCA-221ENST00000566889 PKD1P98161 4303 aa13.08□□□□□ -0.32
FANCA-221ENST00000566889 KRTAP10-6P60371 365 aaPredicted RBP13.07□□□□□ -0.32
FANCA-221ENST00000566889 KRTAP13-4Q3LI77 160 aa12.99□□□□□ -0.33
FANCA-221ENST00000566889 SACSQ9NZJ4 4579 aa12.99□□□□□ -0.33
FANCA-221ENST00000566889 A0A0D9SG42 100 aa12.96□□□□□ -0.34
FANCA-221ENST00000566889 KRTAP15-1Q3LI76 137 aa12.95□□□□□ -0.34
FANCA-221ENST00000566889 KRTAP3-3Q9BYR6 98 aa12.92□□□□□ -0.34
FANCA-221ENST00000566889 KRTAP3-2Q9BYR7 98 aa12.91□□□□□ -0.34
FANCA-221ENST00000566889 DNHD1Q96M86 4753 aa12.9□□□□□ -0.34
FANCA-221ENST00000566889 FAT2Q9NYQ8 4349 aa12.88□□□□□ -0.35
FANCA-221ENST00000566889 C10orf95Q9H7T3 257 aa12.86□□□□□ -0.35
FANCA-221ENST00000566889 NDUFAF8A1L188 74 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 887.3 ms