RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 CSAG1Q6PB30 78 aa6.34□□□□□ -1.4
UBFD1-205ENST00000566136 APLNQ9ULZ1 77 aa6.33□□□□□ -1.4
UBFD1-205ENST00000566136 PDE6GP18545 87 aa6.33□□□□□ -1.4
UBFD1-205ENST00000566136 ATP5EP56381 51 aaPredicted RBP6.32□□□□□ -1.4
UBFD1-205ENST00000566136 UBE2DNLQ8IWF7 75 aa6.32□□□□□ -1.4
UBFD1-205ENST00000566136 Q9BRP9 147 aa6.32□□□□□ -1.4
UBFD1-205ENST00000566136 ETDCA0A1B0GVM5 59 aa6.32□□□□□ -1.4
UBFD1-205ENST00000566136 MOBPQ13875 183 aa6.32□□□□□ -1.4
UBFD1-205ENST00000566136 LINC00483Q53H64 154 aa6.32□□□□□ -1.4
UBFD1-205ENST00000566136 A0A1B0GU33 70 aa6.31□□□□□ -1.4
UBFD1-205ENST00000566136 Q6ZRX8 168 aa6.31□□□□□ -1.4
UBFD1-205ENST00000566136 IGKV2-24A0A0C4DH68 120 aa6.31□□□□□ -1.4
UBFD1-205ENST00000566136 ST20-AS1Q8NBB2 130 aa6.31□□□□□ -1.4
UBFD1-205ENST00000566136 HECTD4Q9Y4D8 3996 aa6.3□□□□□ -1.4
UBFD1-205ENST00000566136 H7BZZ5 65 aa6.3□□□□□ -1.4
UBFD1-205ENST00000566136 PSCAO43653 123 aa6.3□□□□□ -1.4
UBFD1-205ENST00000566136 DNAH2Q9P225 4427 aa6.3□□□□□ -1.4
UBFD1-205ENST00000566136 ASB16-AS1Q495Z4 193 aa6.3□□□□□ -1.4
UBFD1-205ENST00000566136 A0A096LNI7 61 aa6.29□□□□□ -1.4
UBFD1-205ENST00000566136 ERC2-IT1O76042 136 aa6.29□□□□□ -1.4
UBFD1-205ENST00000566136 HERC2O95714 4834 aa6.29□□□□□ -1.4
UBFD1-205ENST00000566136 SPRR1AP35321 89 aa6.28□□□□□ -1.4
UBFD1-205ENST00000566136 FAT2Q9NYQ8 4349 aa6.28□□□□□ -1.4
UBFD1-205ENST00000566136 DNAH17Q9UFH2 4485 aa6.27□□□□□ -1.4
UBFD1-205ENST00000566136 R4GN34 69 aa6.27□□□□□ -1.4
UBFD1-205ENST00000566136 LIMD2Q9BT23 127 aa6.26□□□□□ -1.41
UBFD1-205ENST00000566136 A0A1W2PNN7 141 aa6.26□□□□□ -1.41
UBFD1-205ENST00000566136 KIAA1109Q2LD37 5005 aa6.26□□□□□ -1.41
UBFD1-205ENST00000566136 Q8N9L7 120 aa6.25□□□□□ -1.41
UBFD1-205ENST00000566136 PKHD1P08F94 4074 aa6.24□□□□□ -1.41
UBFD1-205ENST00000566136 TRAV22A0A0B4J277 110 aa6.24□□□□□ -1.41
UBFD1-205ENST00000566136 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
UBFD1-205ENST00000566136 IGLV5-48A0A075B6I7 105 aa6.23□□□□□ -1.41
UBFD1-205ENST00000566136 PRLHP81277 87 aa6.23□□□□□ -1.41
UBFD1-205ENST00000566136 TMEM254Q8TBM7 123 aa6.23□□□□□ -1.41
UBFD1-205ENST00000566136 NREPQ16612 68 aa6.23□□□□□ -1.41
UBFD1-205ENST00000566136 A0A1W2PNM2 257 aa6.22□□□□□ -1.41
UBFD1-205ENST00000566136 DYNC1H1Q14204 4646 aaKnown RBP6.22□□□□□ -1.41
UBFD1-205ENST00000566136 A0A0G2JQZ4 141 aa6.22□□□□□ -1.41
UBFD1-205ENST00000566136 C1orf137Q5JT78 98 aa6.22□□□□□ -1.41
UBFD1-205ENST00000566136 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
UBFD1-205ENST00000566136 PKD1P98161 4303 aa6.21□□□□□ -1.42
UBFD1-205ENST00000566136 CHKB-CPT1BH3BT56 60 aa6.21□□□□□ -1.42
UBFD1-205ENST00000566136 KRTAP11-1Q8IUC1 163 aa6.21□□□□□ -1.42
UBFD1-205ENST00000566136 DNAH11Q96DT5 4516 aa6.2□□□□□ -1.42
UBFD1-205ENST00000566136 RTL8CO15255 209 aa6.2□□□□□ -1.42
UBFD1-205ENST00000566136 HIGD2AQ9BW72 106 aa6.2□□□□□ -1.42
UBFD1-205ENST00000566136 NBDYA0A0U1RRE5 68 aa6.2□□□□□ -1.42
UBFD1-205ENST00000566136 C20orf197Q8N268 126 aa6.2□□□□□ -1.42
UBFD1-205ENST00000566136 CDC42SE1Q9NRR8 79 aa6.2□□□□□ -1.42
UBFD1-205ENST00000566136 Q5VV11 94 aa6.19□□□□□ -1.42
UBFD1-205ENST00000566136 A0A1B0GVY2 172 aa6.19□□□□□ -1.42
UBFD1-205ENST00000566136 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
UBFD1-205ENST00000566136 PCLOQ9Y6V0 5065 aa6.18□□□□□ -1.42
UBFD1-205ENST00000566136 LRCOL1A6NCL2 159 aa6.18□□□□□ -1.42
UBFD1-205ENST00000566136 IGKV4-1P06312 121 aa6.18□□□□□ -1.42
UBFD1-205ENST00000566136 F8WEM9 126 aa6.16□□□□□ -1.42
UBFD1-205ENST00000566136 Q6ZRN7 208 aaPredicted RBP6.16□□□□□ -1.42
UBFD1-205ENST00000566136 SNURFQ9Y675 71 aa6.15□□□□□ -1.42
UBFD1-205ENST00000566136 RYR1P21817 5038 aa6.14□□□□□ -1.43
UBFD1-205ENST00000566136 BCE1O60756 84 aa6.14□□□□□ -1.43
UBFD1-205ENST00000566136 IGFL1Q6UW32 110 aa6.14□□□□□ -1.43
UBFD1-205ENST00000566136 SPRR4Q96PI1 79 aa6.14□□□□□ -1.43
UBFD1-205ENST00000566136 LRP1BQ9NZR2 4599 aa6.11□□□□□ -1.43
UBFD1-205ENST00000566136 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
UBFD1-205ENST00000566136 DSCR10P59022 87 aa6.1□□□□□ -1.43
UBFD1-205ENST00000566136 HSPG2P98160 4391 aa6.1□□□□□ -1.43
UBFD1-205ENST00000566136 K7EQZ3 153 aa6.09□□□□□ -1.43
UBFD1-205ENST00000566136 A0A087WSZ3 146 aa6.09□□□□□ -1.43
UBFD1-205ENST00000566136 A0A087WTM6 91 aa6.08□□□□□ -1.44
UBFD1-205ENST00000566136 KLKP1Q107X0 134 aa6.08□□□□□ -1.44
UBFD1-205ENST00000566136 SPACA4Q8TDM5 124 aa6.07□□□□□ -1.44
UBFD1-205ENST00000566136 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
UBFD1-205ENST00000566136 CYP4F30PQ9H0H9 118 aa6.06□□□□□ -1.44
UBFD1-205ENST00000566136 APOBP04114 4563 aaKnown RBP6.06□□□□□ -1.44
UBFD1-205ENST00000566136 KRTAP4-5Q9BYR2 181 aa6.05□□□□□ -1.44
UBFD1-205ENST00000566136 DNAH5Q8TE73 4624 aa6.05□□□□□ -1.44
UBFD1-205ENST00000566136 NDUFC1O43677 76 aa6.05□□□□□ -1.44
UBFD1-205ENST00000566136 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
UBFD1-205ENST00000566136 SPRR1BP22528 89 aa6.04□□□□□ -1.44
UBFD1-205ENST00000566136 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
UBFD1-205ENST00000566136 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
UBFD1-205ENST00000566136 HRES1P13985 223 aa6.03□□□□□ -1.44
UBFD1-205ENST00000566136 WFDC13Q8IUB5 93 aa6.02□□□□□ -1.45
UBFD1-205ENST00000566136 PSORS1C2Q9UIG4 136 aa5.99□□□□□ -1.45
UBFD1-205ENST00000566136 ANAPC11Q9NYG5 84 aa5.98□□□□□ -1.45
UBFD1-205ENST00000566136 DNAH8Q96JB1 4490 aa5.98□□□□□ -1.45
UBFD1-205ENST00000566136 LINC00472Q9H8W2 130 aa5.97□□□□□ -1.45
UBFD1-205ENST00000566136 PLAC8Q9NZF1 115 aa5.96□□□□□ -1.46
UBFD1-205ENST00000566136 FAT1Q14517 4588 aa5.95□□□□□ -1.46
UBFD1-205ENST00000566136 LOC101927531A0A1B0GV80 90 aa5.94□□□□□ -1.46
UBFD1-205ENST00000566136 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
UBFD1-205ENST00000566136 TPRXLQ17RH7 258 aa5.92□□□□□ -1.46
UBFD1-205ENST00000566136 PRO2289Q9P1D8 64 aa5.92□□□□□ -1.46
UBFD1-205ENST00000566136 SPINT4Q6UDR6 99 aa5.91□□□□□ -1.46
UBFD1-205ENST00000566136 KRTAP10-1P60331 282 aa5.9□□□□□ -1.46
UBFD1-205ENST00000566136 ZCCHC13Q8WW36 166 aaKnown RBP5.9□□□□□ -1.46
UBFD1-205ENST00000566136 Q96NJ1 140 aa5.9□□□□□ -1.47
UBFD1-205ENST00000566136 HERC1Q15751 4861 aa5.88□□□□□ -1.47
UBFD1-205ENST00000566136 MMP24-AS1A0A0U1RRL7 71 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms