RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 KRTAP7-1Q8IUC3 87 aa7.66□□□□□ -1.18
COMMD4-209ENST00000564068 LINC01554Q52M75 96 aa7.66□□□□□ -1.18
COMMD4-209ENST00000564068 IGLV7-43P04211 117 aa7.65□□□□□ -1.18
COMMD4-209ENST00000564068 PLA2G1BP04054 148 aaKnown RBP7.64□□□□□ -1.19
COMMD4-209ENST00000564068 TENM1Q9UKZ4 2725 aa7.64□□□□□ -1.19
COMMD4-209ENST00000564068 CSMD2Q7Z408 3487 aa7.64□□□□□ -1.19
COMMD4-209ENST00000564068 PKD1L1Q8TDX9 2849 aa7.63□□□□□ -1.19
COMMD4-209ENST00000564068 KRTAP21-3Q3LHN1 58 aa7.6□□□□□ -1.19
COMMD4-209ENST00000564068 KRTAP11-1Q8IUC1 163 aa7.6□□□□□ -1.19
COMMD4-209ENST00000564068 FLG2Q5D862 2391 aaPredicted RBP7.59□□□□□ -1.2
COMMD4-209ENST00000564068 VWFP04275 2813 aa7.58□□□□□ -1.2
COMMD4-209ENST00000564068 VPS13CQ709C8 3753 aa7.58□□□□□ -1.2
COMMD4-209ENST00000564068 A0A087X002 238 aa7.58□□□□□ -1.2
COMMD4-209ENST00000564068 SPINT4Q6UDR6 99 aa7.58□□□□□ -1.2
COMMD4-209ENST00000564068 NOTCH2NLQ7Z3S9 236 aa7.58□□□□□ -1.2
COMMD4-209ENST00000564068 PANO1I0J062 215 aa7.58□□□□□ -1.2
COMMD4-209ENST00000564068 CSAG1Q6PB30 78 aa7.57□□□□□ -1.2
COMMD4-209ENST00000564068 Q5W150 140 aa7.57□□□□□ -1.2
COMMD4-209ENST00000564068 C9orf92A6NGG3 77 aa7.56□□□□□ -1.2
COMMD4-209ENST00000564068 A6NN06 94 aa7.56□□□□□ -1.2
COMMD4-209ENST00000564068 H3BS24 57 aa7.56□□□□□ -1.2
COMMD4-209ENST00000564068 Q6ZR54 194 aa7.55□□□□□ -1.2
COMMD4-209ENST00000564068 TGP01266 2768 aa7.55□□□□□ -1.2
COMMD4-209ENST00000564068 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
COMMD4-209ENST00000564068 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
COMMD4-209ENST00000564068 DMAC1Q96GE9 116 aa7.47□□□□□ -1.21
COMMD4-209ENST00000564068 CRIPTQ9P021 101 aa7.47□□□□□ -1.21
COMMD4-209ENST00000564068 A0A0D9SG42 100 aa7.46□□□□□ -1.21
COMMD4-209ENST00000564068 LINC00304Q8N9R0 145 aa7.46□□□□□ -1.22
COMMD4-209ENST00000564068 A0A1B0GU33 70 aa7.45□□□□□ -1.22
COMMD4-209ENST00000564068 SMR3BP02814 79 aaPredicted RBP7.43□□□□□ -1.22
COMMD4-209ENST00000564068 PLAC8Q9NZF1 115 aa7.43□□□□□ -1.22
COMMD4-209ENST00000564068 TENM2Q9NT68 2774 aa7.41□□□□□ -1.22
COMMD4-209ENST00000564068 LINC00483Q53H64 154 aa7.4□□□□□ -1.22
COMMD4-209ENST00000564068 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
COMMD4-209ENST00000564068 J3QL48 77 aa7.3□□□□□ -1.24
COMMD4-209ENST00000564068 KRTAP13-1Q8IUC0 172 aa7.3□□□□□ -1.24
COMMD4-209ENST00000564068 ASB16-AS1Q495Z4 193 aa7.25□□□□□ -1.25
COMMD4-209ENST00000564068 SRRM2Q9UQ35 2752 aaKnown RBP7.23□□□□□ -1.25
COMMD4-209ENST00000564068 KRTAP10-2P60368 255 aa7.22□□□□□ -1.25
COMMD4-209ENST00000564068 Q6ZRN7 208 aaPredicted RBP7.22□□□□□ -1.25
COMMD4-209ENST00000564068 H1FX-AS1Q4G0G2 97 aa7.17□□□□□ -1.26
COMMD4-209ENST00000564068 KRTAP10-1P60331 282 aa7.16□□□□□ -1.26
COMMD4-209ENST00000564068 TRRAPQ9Y4A5 3859 aa7.16□□□□□ -1.26
COMMD4-209ENST00000564068 FBN3Q75N90 2809 aa7.12□□□□□ -1.27
COMMD4-209ENST00000564068 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
COMMD4-209ENST00000564068 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
COMMD4-209ENST00000564068 RPL37P61927 97 aaKnown RBP7.12□□□□□ -1.27
COMMD4-209ENST00000564068 ROMO1P60602 79 aa7.1□□□□□ -1.27
COMMD4-209ENST00000564068 AKAP9Q99996 3911 aa7.06□□□□□ -1.28
COMMD4-209ENST00000564068 ZNF469Q96JG9 3925 aaPredicted RBP7.03□□□□□ -1.28
COMMD4-209ENST00000564068 ANK3Q12955 4377 aaKnown RBP7.02□□□□□ -1.29
COMMD4-209ENST00000564068 COX6B2Q6YFQ2 88 aa7.01□□□□□ -1.29
COMMD4-209ENST00000564068 Q6ZSA8 131 aa7□□□□□ -1.29
COMMD4-209ENST00000564068 Q5VSD8 79 aa7□□□□□ -1.29
COMMD4-209ENST00000564068 S4R3F8 94 aa6.99□□□□□ -1.29
COMMD4-209ENST00000564068 A8MUU9 505 aa6.96□□□□□ -1.3
COMMD4-209ENST00000564068 COL7A1Q02388 2944 aa6.96□□□□□ -1.3
COMMD4-209ENST00000564068 H0YAA0 97 aa6.92□□□□□ -1.3
COMMD4-209ENST00000564068 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
COMMD4-209ENST00000564068 LUZP6Q538Z0 58 aa6.92□□□□□ -1.3
COMMD4-209ENST00000564068 NDUFAF8A1L188 74 aa6.9□□□□□ -1.31
COMMD4-209ENST00000564068 KRTAP16-1A8MUX0 517 aa6.86□□□□□ -1.31
COMMD4-209ENST00000564068 MEGF8Q7Z7M0 2845 aa6.84□□□□□ -1.31
COMMD4-209ENST00000564068 R4GN34 69 aa6.83□□□□□ -1.32
COMMD4-209ENST00000564068 CAMK2N1Q7Z7J9 78 aa6.83□□□□□ -1.32
COMMD4-209ENST00000564068 KRTAP1-4P0C5Y4 121 aa6.82□□□□□ -1.32
COMMD4-209ENST00000564068 C10orf95Q9H7T3 257 aa6.81□□□□□ -1.32
COMMD4-209ENST00000564068 M0QZ58 72 aa6.78□□□□□ -1.32
COMMD4-209ENST00000564068 RPS29P62273 56 aaKnown RBP6.76□□□□□ -1.33
COMMD4-209ENST00000564068 CSMD3Q7Z407 3707 aa6.76□□□□□ -1.33
COMMD4-209ENST00000564068 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
COMMD4-209ENST00000564068 DNHD1Q96M86 4753 aa6.75□□□□□ -1.33
COMMD4-209ENST00000564068 A0A0A0MQY5 61 aa6.67□□□□□ -1.34
COMMD4-209ENST00000564068 P0C880 135 aa6.58□□□□□ -1.36
COMMD4-209ENST00000564068 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
COMMD4-209ENST00000564068 A0A1B0GVY2 172 aa6.51□□□□□ -1.37
COMMD4-209ENST00000564068 TPRXLQ17RH7 258 aa6.46□□□□□ -1.37
COMMD4-209ENST00000564068 M0R2T5 61 aa6.46□□□□□ -1.38
COMMD4-209ENST00000564068 SEC61BP60468 96 aaKnown RBP6.46□□□□□ -1.38
COMMD4-209ENST00000564068 XP32Q5T750 250 aa6.45□□□□□ -1.38
COMMD4-209ENST00000564068 HUWE1Q7Z6Z7 4374 aaKnown RBP6.43□□□□□ -1.38
COMMD4-209ENST00000564068 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
COMMD4-209ENST00000564068 KRTAP12-2P59991 146 aa6.39□□□□□ -1.39
COMMD4-209ENST00000564068 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
COMMD4-209ENST00000564068 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
COMMD4-209ENST00000564068 ANK2Q01484 3957 aa6.36□□□□□ -1.39
COMMD4-209ENST00000564068 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
COMMD4-209ENST00000564068 KRTAP12-1P59990 96 aa6.28□□□□□ -1.4
COMMD4-209ENST00000564068 DNAH9Q9NYC9 4486 aa6.28□□□□□ -1.4
COMMD4-209ENST00000564068 PRKDCP78527 4128 aaKnown RBP6.25□□□□□ -1.41
COMMD4-209ENST00000564068 TNP1P09430 55 aa6.22□□□□□ -1.41
COMMD4-209ENST00000564068 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
COMMD4-209ENST00000564068 DNAH10Q8IVF4 4471 aa6.22□□□□□ -1.41
COMMD4-209ENST00000564068 LYSTQ99698 3801 aa6.2□□□□□ -1.42
COMMD4-209ENST00000564068 PLECQ15149 4684 aaKnown RBP6.18□□□□□ -1.42
COMMD4-209ENST00000564068 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
COMMD4-209ENST00000564068 KRTAP3-2Q9BYR7 98 aa6.14□□□□□ -1.43
COMMD4-209ENST00000564068 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
COMMD4-209ENST00000564068 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms