RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 LINC00313P59037 77 aa8.26□□□□□ -1.09
AC040174.1-201ENST00000563003 CHTF8P0CG12 524 aa8.25□□□□□ -1.09
AC040174.1-201ENST00000563003 C8orf87E5RJ46 101 aa8.25□□□□□ -1.09
AC040174.1-201ENST00000563003 PRR26Q8N8Z3 221 aa8.25□□□□□ -1.09
AC040174.1-201ENST00000563003 PRAC1Q96KF2 57 aa8.23□□□□□ -1.09
AC040174.1-201ENST00000563003 KMT2CQ8NEZ4 4911 aaKnown RBP8.23□□□□□ -1.09
AC040174.1-201ENST00000563003 IGHV6-1A0A0B4J1U7 121 aa8.23□□□□□ -1.09
AC040174.1-201ENST00000563003 IGLV9-49A0A0B4J1Y8 123 aa8.2□□□□□ -1.1
AC040174.1-201ENST00000563003 A0A1B0GVX0 72 aa8.2□□□□□ -1.1
AC040174.1-201ENST00000563003 MRPL34Q9BQ48 92 aaKnown RBP8.2□□□□□ -1.1
AC040174.1-201ENST00000563003 WWC2-AS2Q96NR7 200 aa8.19□□□□□ -1.1
AC040174.1-201ENST00000563003 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
AC040174.1-201ENST00000563003 KMT2AQ03164 3969 aa8.18□□□□□ -1.1
AC040174.1-201ENST00000563003 A0A087X002 238 aa8.17□□□□□ -1.1
AC040174.1-201ENST00000563003 NOTCH2NLQ7Z3S9 236 aa8.17□□□□□ -1.1
AC040174.1-201ENST00000563003 A0A087WTM6 91 aa8.16□□□□□ -1.1
AC040174.1-201ENST00000563003 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
AC040174.1-201ENST00000563003 KRTAP13-1Q8IUC0 172 aa8.15□□□□□ -1.1
AC040174.1-201ENST00000563003 CDK2AP2O75956 126 aa8.15□□□□□ -1.11
AC040174.1-201ENST00000563003 DNAH6Q9C0G6 4158 aa8.14□□□□□ -1.11
AC040174.1-201ENST00000563003 PLA2G1BP04054 148 aaKnown RBP8.14□□□□□ -1.11
AC040174.1-201ENST00000563003 Q5W150 140 aa8.13□□□□□ -1.11
AC040174.1-201ENST00000563003 HECTD4Q9Y4D8 3996 aa8.13□□□□□ -1.11
AC040174.1-201ENST00000563003 LY6G6CO95867 125 aa8.13□□□□□ -1.11
AC040174.1-201ENST00000563003 C1orf134Q5TEV5 83 aa8.13□□□□□ -1.11
AC040174.1-201ENST00000563003 DNAH2Q9P225 4427 aa8.13□□□□□ -1.11
AC040174.1-201ENST00000563003 SACSQ9NZJ4 4579 aa8.12□□□□□ -1.11
AC040174.1-201ENST00000563003 RYR3Q15413 4870 aa8.12□□□□□ -1.11
AC040174.1-201ENST00000563003 ACYP2P14621 99 aa8.12□□□□□ -1.11
AC040174.1-201ENST00000563003 PANO1I0J062 215 aa8.09□□□□□ -1.11
AC040174.1-201ENST00000563003 LINC01554Q52M75 96 aa8.09□□□□□ -1.11
AC040174.1-201ENST00000563003 RTL8CO15255 209 aa8.09□□□□□ -1.12
AC040174.1-201ENST00000563003 KRTAP13-3Q3SY46 172 aa8.09□□□□□ -1.12
AC040174.1-201ENST00000563003 SPACA4Q8TDM5 124 aa8.09□□□□□ -1.12
AC040174.1-201ENST00000563003 DNAH17Q9UFH2 4485 aa8.08□□□□□ -1.12
AC040174.1-201ENST00000563003 ALMS1Q8TCU4 4167 aa8.08□□□□□ -1.12
AC040174.1-201ENST00000563003 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.07□□□□□ -1.12
AC040174.1-201ENST00000563003 LINC00483Q53H64 154 aa8.06□□□□□ -1.12
AC040174.1-201ENST00000563003 HYDINQ4G0P3 5121 aa8.05□□□□□ -1.12
AC040174.1-201ENST00000563003 A0A1B0GU69 56 aa8.05□□□□□ -1.12
AC040174.1-201ENST00000563003 SPATA8Q6RVD6 105 aa8.05□□□□□ -1.12
AC040174.1-201ENST00000563003 RYR2Q92736 4967 aa8.04□□□□□ -1.12
AC040174.1-201ENST00000563003 IGLV5-52A0A0A0MRZ9 124 aa8.04□□□□□ -1.12
AC040174.1-201ENST00000563003 DMAC1Q96GE9 116 aa8.03□□□□□ -1.12
AC040174.1-201ENST00000563003 ANAPC11Q9NYG5 84 aa8.02□□□□□ -1.13
AC040174.1-201ENST00000563003 SPINK6Q6UWN8 80 aa8.01□□□□□ -1.13
AC040174.1-201ENST00000563003 FRAS1Q86XX4 4008 aa8□□□□□ -1.13
AC040174.1-201ENST00000563003 MIR22HGQ0VDD5 57 aa7.99□□□□□ -1.13
AC040174.1-201ENST00000563003 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
AC040174.1-201ENST00000563003 UQCR11O14957 56 aa7.96□□□□□ -1.13
AC040174.1-201ENST00000563003 H3BS24 57 aa7.95□□□□□ -1.14
AC040174.1-201ENST00000563003 DNAH11Q96DT5 4516 aa7.93□□□□□ -1.14
AC040174.1-201ENST00000563003 DNAH8Q96JB1 4490 aa7.93□□□□□ -1.14
AC040174.1-201ENST00000563003 CSAG1Q6PB30 78 aa7.92□□□□□ -1.14
AC040174.1-201ENST00000563003 PSORS1C2Q9UIG4 136 aa7.92□□□□□ -1.14
AC040174.1-201ENST00000563003 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
AC040174.1-201ENST00000563003 DNAH5Q8TE73 4624 aa7.91□□□□□ -1.14
AC040174.1-201ENST00000563003 RETNLBQ9BQ08 111 aa7.91□□□□□ -1.14
AC040174.1-201ENST00000563003 FAT2Q9NYQ8 4349 aa7.88□□□□□ -1.15
AC040174.1-201ENST00000563003 FAM229AH3BQW9 127 aa7.87□□□□□ -1.15
AC040174.1-201ENST00000563003 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
AC040174.1-201ENST00000563003 PKD1P98161 4303 aa7.87□□□□□ -1.15
AC040174.1-201ENST00000563003 ZNF861PO60384 105 aa7.87□□□□□ -1.15
AC040174.1-201ENST00000563003 CIRBP-AS1Q8TBR5 109 aa7.86□□□□□ -1.15
AC040174.1-201ENST00000563003 Q6ZSA8 131 aa7.83□□□□□ -1.16
AC040174.1-201ENST00000563003 EPPK1P58107 5090 aaKnown RBP7.83□□□□□ -1.16
AC040174.1-201ENST00000563003 IGLV7-43P04211 117 aa7.82□□□□□ -1.16
AC040174.1-201ENST00000563003 KRTAP10-1P60331 282 aa7.82□□□□□ -1.16
AC040174.1-201ENST00000563003 IGKV2D-30A0A075B6S6 120 aa7.76□□□□□ -1.17
AC040174.1-201ENST00000563003 PKHD1P08F94 4074 aa7.73□□□□□ -1.17
AC040174.1-201ENST00000563003 SSBP3-AS1Q7Z2R9 100 aa7.72□□□□□ -1.17
AC040174.1-201ENST00000563003 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.17
AC040174.1-201ENST00000563003 LRP1BQ9NZR2 4599 aa7.71□□□□□ -1.18
AC040174.1-201ENST00000563003 SPINK1P00995 79 aa7.7□□□□□ -1.18
AC040174.1-201ENST00000563003 VPS13BQ7Z7G8 4022 aa7.67□□□□□ -1.18
AC040174.1-201ENST00000563003 A8MUU9 505 aa7.65□□□□□ -1.19
AC040174.1-201ENST00000563003 A0A1B0GVY2 172 aa7.64□□□□□ -1.19
AC040174.1-201ENST00000563003 KRTAP25-1Q3LHN0 102 aa7.64□□□□□ -1.19
AC040174.1-201ENST00000563003 H0YAA0 97 aa7.63□□□□□ -1.19
AC040174.1-201ENST00000563003 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
AC040174.1-201ENST00000563003 Q8N1X5 172 aa7.62□□□□□ -1.19
AC040174.1-201ENST00000563003 LINC00304Q8N9R0 145 aa7.61□□□□□ -1.19
AC040174.1-201ENST00000563003 DYNC1H1Q14204 4646 aaKnown RBP7.6□□□□□ -1.19
AC040174.1-201ENST00000563003 ROMO1P60602 79 aa7.59□□□□□ -1.19
AC040174.1-201ENST00000563003 KRTAP13-2Q52LG2 175 aa7.59□□□□□ -1.19
AC040174.1-201ENST00000563003 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
AC040174.1-201ENST00000563003 KIAA1109Q2LD37 5005 aa7.55□□□□□ -1.2
AC040174.1-201ENST00000563003 TYMSOSQ8TAI1 123 aa7.54□□□□□ -1.2
AC040174.1-201ENST00000563003 APOBP04114 4563 aaKnown RBP7.52□□□□□ -1.21
AC040174.1-201ENST00000563003 SMR3BP02814 79 aaPredicted RBP7.51□□□□□ -1.21
AC040174.1-201ENST00000563003 FLG2Q5D862 2391 aaPredicted RBP7.51□□□□□ -1.21
AC040174.1-201ENST00000563003 A0A1B0GU33 70 aa7.51□□□□□ -1.21
AC040174.1-201ENST00000563003 CRIPTQ9P021 101 aa7.46□□□□□ -1.21
AC040174.1-201ENST00000563003 HSPG2P98160 4391 aa7.46□□□□□ -1.22
AC040174.1-201ENST00000563003 H1FX-AS1Q4G0G2 97 aa7.45□□□□□ -1.22
AC040174.1-201ENST00000563003 KRTAP10-4P60372 401 aaPredicted RBP7.44□□□□□ -1.22
AC040174.1-201ENST00000563003 HERC2O95714 4834 aa7.44□□□□□ -1.22
AC040174.1-201ENST00000563003 FAT1Q14517 4588 aa7.43□□□□□ -1.22
AC040174.1-201ENST00000563003 RYR1P21817 5038 aa7.43□□□□□ -1.22
AC040174.1-201ENST00000563003 P0C880 135 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 286.4 ms