RNA–Protein interactions for RNA: ENST00000560869.5

TNFAIP2-209, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP2, Length 4,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-209ENST00000560869 ZCCHC13Q8WW36 166 aaKnown RBP12.13□□□□□ -0.47
TNFAIP2-209ENST00000560869 TENM3Q9P273 2699 aa12.08□□□□□ -0.48
TNFAIP2-209ENST00000560869 KRTAP11-1Q8IUC1 163 aa12.08□□□□□ -0.48
TNFAIP2-209ENST00000560869 A0A087X002 238 aa12.07□□□□□ -0.48
TNFAIP2-209ENST00000560869 NOTCH2NLQ7Z3S9 236 aa12.07□□□□□ -0.48
TNFAIP2-209ENST00000560869 CELSR1Q9NYQ6 3014 aa12.05□□□□□ -0.48
TNFAIP2-209ENST00000560869 KRTAP7-1Q8IUC3 87 aa12.05□□□□□ -0.48
TNFAIP2-209ENST00000560869 CSAG1Q6PB30 78 aa12.04□□□□□ -0.48
TNFAIP2-209ENST00000560869 LCE6AA0A183 80 aa12.03□□□□□ -0.48
TNFAIP2-209ENST00000560869 KRTAP10-2P60368 255 aa12□□□□□ -0.49
TNFAIP2-209ENST00000560869 Q6ZR54 194 aa11.98□□□□□ -0.49
TNFAIP2-209ENST00000560869 SMG1Q96Q15 3661 aaKnown RBP11.97□□□□□ -0.49
TNFAIP2-209ENST00000560869 KRTAP10-1P60331 282 aa11.95□□□□□ -0.5
TNFAIP2-209ENST00000560869 LINC00483Q53H64 154 aa11.95□□□□□ -0.5
TNFAIP2-209ENST00000560869 DMAC1Q96GE9 116 aa11.95□□□□□ -0.5
TNFAIP2-209ENST00000560869 A8MU10 97 aa11.9□□□□□ -0.5
TNFAIP2-209ENST00000560869 Q6ZSA8 131 aa11.89□□□□□ -0.51
TNFAIP2-209ENST00000560869 CSMD1Q96PZ7 3565 aa11.89□□□□□ -0.51
TNFAIP2-209ENST00000560869 TENM1Q9UKZ4 2725 aa11.81□□□□□ -0.52
TNFAIP2-209ENST00000560869 PKD1L1Q8TDX9 2849 aa11.8□□□□□ -0.52
TNFAIP2-209ENST00000560869 H3BS24 57 aa11.78□□□□□ -0.52
TNFAIP2-209ENST00000560869 PDZD2O15018 2839 aa11.75□□□□□ -0.53
TNFAIP2-209ENST00000560869 KRTAP21-3Q3LHN1 58 aa11.75□□□□□ -0.53
TNFAIP2-209ENST00000560869 Q5VSD8 79 aa11.75□□□□□ -0.53
TNFAIP2-209ENST00000560869 CUBNO60494 3623 aa11.73□□□□□ -0.53
TNFAIP2-209ENST00000560869 SPATA8Q6RVD6 105 aa11.72□□□□□ -0.53
TNFAIP2-209ENST00000560869 CAMK2N1Q7Z7J9 78 aa11.72□□□□□ -0.53
TNFAIP2-209ENST00000560869 S4R3F8 94 aa11.72□□□□□ -0.53
TNFAIP2-209ENST00000560869 SVEP1Q4LDE5 3571 aa11.71□□□□□ -0.53
TNFAIP2-209ENST00000560869 Q6ZRN7 208 aaPredicted RBP11.71□□□□□ -0.54
TNFAIP2-209ENST00000560869 RPL37P61927 97 aaKnown RBP11.66□□□□□ -0.54
TNFAIP2-209ENST00000560869 LUZP6Q538Z0 58 aa11.65□□□□□ -0.54
TNFAIP2-209ENST00000560869 FBN1P35555 2871 aaKnown RBP11.65□□□□□ -0.55
TNFAIP2-209ENST00000560869 H1FX-AS1Q4G0G2 97 aa11.64□□□□□ -0.55
TNFAIP2-209ENST00000560869 A6NN06 94 aa11.63□□□□□ -0.55
TNFAIP2-209ENST00000560869 ADM2Q7Z4H4 148 aa11.62□□□□□ -0.55
TNFAIP2-209ENST00000560869 KRTAP13-1Q8IUC0 172 aa11.62□□□□□ -0.55
TNFAIP2-209ENST00000560869 VWFP04275 2813 aa11.6□□□□□ -0.55
TNFAIP2-209ENST00000560869 R4GN34 69 aa11.57□□□□□ -0.56
TNFAIP2-209ENST00000560869 KRTAP13-2Q52LG2 175 aa11.54□□□□□ -0.56
TNFAIP2-209ENST00000560869 ROMO1P60602 79 aa11.54□□□□□ -0.56
TNFAIP2-209ENST00000560869 TGP01266 2768 aa11.5□□□□□ -0.57
TNFAIP2-209ENST00000560869 ASB16-AS1Q495Z4 193 aa11.48□□□□□ -0.57
TNFAIP2-209ENST00000560869 TENM2Q9NT68 2774 aa11.46□□□□□ -0.58
TNFAIP2-209ENST00000560869 M0QZ58 72 aa11.4□□□□□ -0.58
TNFAIP2-209ENST00000560869 SRRM2Q9UQ35 2752 aaKnown RBP11.4□□□□□ -0.59
TNFAIP2-209ENST00000560869 SPENQ96T58 3664 aaKnown RBP11.39□□□□□ -0.59
TNFAIP2-209ENST00000560869 OTOGQ6ZRI0 2925 aa11.38□□□□□ -0.59
TNFAIP2-209ENST00000560869 M0R2T5 61 aa11.37□□□□□ -0.59
TNFAIP2-209ENST00000560869 SEC61BP60468 96 aaKnown RBP11.3□□□□□ -0.6
TNFAIP2-209ENST00000560869 KRTAP25-1Q3LHN0 102 aa11.26□□□□□ -0.61
TNFAIP2-209ENST00000560869 ZFHX3Q15911 3703 aa11.24□□□□□ -0.61
TNFAIP2-209ENST00000560869 RPS29P62273 56 aaKnown RBP11.15□□□□□ -0.62
TNFAIP2-209ENST00000560869 BSNQ9UPA5 3926 aa11.12□□□□□ -0.63
TNFAIP2-209ENST00000560869 NBPF19A0A087WUL8 3843 aa11.12□□□□□ -0.63
TNFAIP2-209ENST00000560869 CSMD2Q7Z408 3487 aa11.09□□□□□ -0.63
TNFAIP2-209ENST00000560869 A0A0A0MQY5 61 aa11.08□□□□□ -0.64
TNFAIP2-209ENST00000560869 A8MUU9 505 aa11.02□□□□□ -0.64
TNFAIP2-209ENST00000560869 KRTAP1-4P0C5Y4 121 aa11.01□□□□□ -0.65
TNFAIP2-209ENST00000560869 FBN3Q75N90 2809 aa10.99□□□□□ -0.65
TNFAIP2-209ENST00000560869 NDUFAF8A1L188 74 aa10.98□□□□□ -0.65
TNFAIP2-209ENST00000560869 C20orf166-AS1Q96NR2 134 aa10.96□□□□□ -0.66
TNFAIP2-209ENST00000560869 H0YAA0 97 aa10.87□□□□□ -0.67
TNFAIP2-209ENST00000560869 C10orf95Q9H7T3 257 aa10.85□□□□□ -0.67
TNFAIP2-209ENST00000560869 KRTAP16-1A8MUX0 517 aa10.83□□□□□ -0.68
TNFAIP2-209ENST00000560869 COL7A1Q02388 2944 aa10.81□□□□□ -0.68
TNFAIP2-209ENST00000560869 PLAC4Q8WY50 150 aa10.76□□□□□ -0.69
TNFAIP2-209ENST00000560869 VPS13CQ709C8 3753 aa10.74□□□□□ -0.69
TNFAIP2-209ENST00000560869 MEGF8Q7Z7M0 2845 aa10.73□□□□□ -0.69
TNFAIP2-209ENST00000560869 XP32Q5T750 250 aa10.67□□□□□ -0.7
TNFAIP2-209ENST00000560869 KRTAP13-3Q3SY46 172 aa10.67□□□□□ -0.7
TNFAIP2-209ENST00000560869 TRRAPQ9Y4A5 3859 aa10.65□□□□□ -0.7
TNFAIP2-209ENST00000560869 P0C880 135 aa10.57□□□□□ -0.72
TNFAIP2-209ENST00000560869 TNP1P09430 55 aa10.47□□□□□ -0.73
TNFAIP2-209ENST00000560869 A0A1B0GVY2 172 aa10.46□□□□□ -0.74
TNFAIP2-209ENST00000560869 ANK3Q12955 4377 aaKnown RBP10.44□□□□□ -0.74
TNFAIP2-209ENST00000560869 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
TNFAIP2-209ENST00000560869 ZNF469Q96JG9 3925 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP2-209ENST00000560869 TPRXLQ17RH7 258 aa10.29□□□□□ -0.76
TNFAIP2-209ENST00000560869 KRTAP3-1Q9BYR8 98 aa10.19□□□□□ -0.78
TNFAIP2-209ENST00000560869 PP632Q6XCG6 107 aa10.19□□□□□ -0.78
TNFAIP2-209ENST00000560869 KRTAP12-2P59991 146 aa10.15□□□□□ -0.79
TNFAIP2-209ENST00000560869 CSMD3Q7Z407 3707 aa10.08□□□□□ -0.8
TNFAIP2-209ENST00000560869 AKAP9Q99996 3911 aa9.97□□□□□ -0.81
TNFAIP2-209ENST00000560869 KRTAP12-1P59990 96 aa9.97□□□□□ -0.81
TNFAIP2-209ENST00000560869 KRTAP13-4Q3LI77 160 aa9.94□□□□□ -0.82
TNFAIP2-209ENST00000560869 KRTAP10-10P60014 251 aa9.91□□□□□ -0.82
TNFAIP2-209ENST00000560869 KRTAP10-6P60371 365 aaPredicted RBP9.87□□□□□ -0.83
TNFAIP2-209ENST00000560869 HUWE1Q7Z6Z7 4374 aaKnown RBP9.66□□□□□ -0.86
TNFAIP2-209ENST00000560869 DNHD1Q96M86 4753 aa9.61□□□□□ -0.87
TNFAIP2-209ENST00000560869 MT1HL1P0DM35 61 aa9.61□□□□□ -0.87
TNFAIP2-209ENST00000560869 KRTAP4-5Q9BYR2 181 aa9.56□□□□□ -0.88
TNFAIP2-209ENST00000560869 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
TNFAIP2-209ENST00000560869 KRTAP3-3Q9BYR6 98 aa9.54□□□□□ -0.88
TNFAIP2-209ENST00000560869 PRO2289Q9P1D8 64 aa9.47□□□□□ -0.89
TNFAIP2-209ENST00000560869 KRTAP10-4P60372 401 aaPredicted RBP9.45□□□□□ -0.9
TNFAIP2-209ENST00000560869 DNAH10Q8IVF4 4471 aa9.33□□□□□ -0.92
TNFAIP2-209ENST00000560869 DNAH9Q9NYC9 4486 aa9.3□□□□□ -0.92
TNFAIP2-209ENST00000560869 KRTAP15-1Q3LI76 137 aa9.3□□□□□ -0.92
TNFAIP2-209ENST00000560869 PLECQ15149 4684 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms