RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-210ENST00000557206 MYO9AB2RTY4 2548 aa1.15□□□□□ -2.23
HIF1A-210ENST00000557206 ROS1P08922 2347 aa1.15□□□□□ -2.23
HIF1A-210ENST00000557206 AKAP6Q13023 2319 aa1.15□□□□□ -2.23
HIF1A-210ENST00000557206 MAP1AP78559 2803 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-210ENST00000557206 UNC79Q9P2D8 2635 aa1.14□□□□□ -2.23
HIF1A-210ENST00000557206 LAMA5O15230 3695 aa1.14□□□□□ -2.23
HIF1A-210ENST00000557206 TACC2O95359 2948 aa1.14□□□□□ -2.23
HIF1A-210ENST00000557206 MAST4O15021 2626 aa1.14□□□□□ -2.23
HIF1A-210ENST00000557206 FLNAP21333 2647 aaKnown RBP1.14□□□□□ -2.23
HIF1A-210ENST00000557206 COL12A1Q99715 3063 aa1.14□□□□□ -2.23
HIF1A-210ENST00000557206 WNK2Q9Y3S1 2297 aa1.13□□□□□ -2.23
HIF1A-210ENST00000557206 TLN2Q9Y4G6 2542 aa1.13□□□□□ -2.23
HIF1A-210ENST00000557206 NCOA6Q14686 2063 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-210ENST00000557206 TENM4Q6N022 2769 aa1.13□□□□□ -2.23
HIF1A-210ENST00000557206 H3BSH0 61 aa1.13□□□□□ -2.23
HIF1A-210ENST00000557206 RPS27P42677 84 aaKnown RBP1.13□□□□□ -2.23
HIF1A-210ENST00000557206 POLQO75417 2590 aa1.13□□□□□ -2.23
HIF1A-210ENST00000557206 CADP27708 2225 aa1.13□□□□□ -2.23
HIF1A-210ENST00000557206 ADGRG4Q8IZF6 3080 aa1.13□□□□□ -2.23
HIF1A-210ENST00000557206 ZFHX4Q86UP3 3567 aa1.13□□□□□ -2.23
HIF1A-210ENST00000557206 UTP20O75691 2785 aaKnown RBP1.13□□□□□ -2.23
HIF1A-210ENST00000557206 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.12□□□□□ -2.231e-6■■■■■ 32.3
HIF1A-210ENST00000557206 CRYBG3Q68DQ2 2970 aa1.12□□□□□ -2.23
HIF1A-210ENST00000557206 NAV3Q8IVL0 2385 aa1.12□□□□□ -2.23
HIF1A-210ENST00000557206 ITPR3Q14573 2671 aa1.12□□□□□ -2.23
HIF1A-210ENST00000557206 SETXQ7Z333 2677 aaKnown RBP1.12□□□□□ -2.23
HIF1A-210ENST00000557206 LINC01590Q5TEZ4 76 aa1.12□□□□□ -2.23
HIF1A-210ENST00000557206 DEFB108BQ8NET1 73 aa1.12□□□□□ -2.23
HIF1A-210ENST00000557206 LINC00308Q8TCZ7 52 aa1.12□□□□□ -2.23
HIF1A-210ENST00000557206 LRBAP50851 2863 aa1.12□□□□□ -2.23
HIF1A-210ENST00000557206 MED13LQ71F56 2210 aa1.12□□□□□ -2.23
HIF1A-210ENST00000557206 ASH1LQ9NR48 2969 aaKnown RBP1.11□□□□□ -2.23
HIF1A-210ENST00000557206 ITPR2Q14571 2701 aa1.11□□□□□ -2.23
HIF1A-210ENST00000557206 USF3Q68DE3 2245 aa1.11□□□□□ -2.23
HIF1A-210ENST00000557206 MTORP42345 2549 aa1.11□□□□□ -2.23
HIF1A-210ENST00000557206 SMG1Q96Q15 3661 aaKnown RBP1.11□□□□□ -2.23
HIF1A-210ENST00000557206 LYNX1G3V0Z9 82 aa1.11□□□□□ -2.23
HIF1A-210ENST00000557206 MINOS1Q5TGZ0 78 aa1.11□□□□□ -2.23
HIF1A-210ENST00000557206 C10orf95Q9H7T3 257 aa1.11□□□□□ -2.23
HIF1A-210ENST00000557206 SETD2Q9BYW2 2564 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-210ENST00000557206 HRNRQ86YZ3 2850 aaPredicted RBP1.11□□□□□ -2.23
HIF1A-210ENST00000557206 TEX15Q9BXT5 2789 aa1.11□□□□□ -2.23
HIF1A-210ENST00000557206 APCP25054 2843 aa1.11□□□□□ -2.23
HIF1A-210ENST00000557206 SONP18583 2426 aaKnown RBP1.1□□□□□ -2.23
HIF1A-210ENST00000557206 DCHS2Q6V1P9 2916 aa1.1□□□□□ -2.23
HIF1A-210ENST00000557206 NSD1Q96L73 2696 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-210ENST00000557206 DEFB108AA8MXU0 73 aa1.1□□□□□ -2.23
HIF1A-210ENST00000557206 TFF3Q07654 80 aa1.1□□□□□ -2.23
HIF1A-210ENST00000557206 ARHGAP5-AS1Q96IT6 56 aa1.1□□□□□ -2.23
HIF1A-210ENST00000557206 KAAG1Q9UBP8 84 aa1.1□□□□□ -2.23
HIF1A-210ENST00000557206 ABCA2Q9BZC7 2435 aa1.1□□□□□ -2.23
HIF1A-210ENST00000557206 ABCA1O95477 2261 aa1.1□□□□□ -2.23
HIF1A-210ENST00000557206 CELSR2Q9HCU4 2923 aa1.1□□□□□ -2.23
HIF1A-210ENST00000557206 C2CD3Q4AC94 2353 aa1.1□□□□□ -2.23
HIF1A-210ENST00000557206 JMJD1CQ15652 2540 aa1.09□□□□□ -2.23
HIF1A-210ENST00000557206 Q5VSD8 79 aa1.09□□□□□ -2.23
HIF1A-210ENST00000557206 C6orf48Q9UBA6 75 aa1.09□□□□□ -2.23
HIF1A-210ENST00000557206 F8P00451 2351 aa1.09□□□□□ -2.23
HIF1A-210ENST00000557206 RELNP78509 3460 aa1.09□□□□□ -2.24
HIF1A-210ENST00000557206 CSPG4Q6UVK1 2322 aa1.09□□□□□ -2.24
HIF1A-210ENST00000557206 CELSR1Q9NYQ6 3014 aa1.08□□□□□ -2.24
HIF1A-210ENST00000557206 ACANP16112 2415 aa1.08□□□□□ -2.24
HIF1A-210ENST00000557206 H3BUX3 64 aa1.08□□□□□ -2.24
HIF1A-210ENST00000557206 LEAP2Q969E1 77 aa1.08□□□□□ -2.24
HIF1A-210ENST00000557206 SMIM2Q9BVW6 85 aa1.08□□□□□ -2.24
HIF1A-210ENST00000557206 APLNQ9ULZ1 77 aa1.08□□□□□ -2.24
HIF1A-210ENST00000557206 ATRQ13535 2644 aa1.08□□□□□ -2.24
HIF1A-210ENST00000557206 TEP1Q99973 2627 aaKnown RBP1.08□□□□□ -2.24
HIF1A-210ENST00000557206 ZFHX3Q15911 3703 aa1.08□□□□□ -2.24
HIF1A-210ENST00000557206 SPENQ96T58 3664 aaKnown RBP1.08□□□□□ -2.24
HIF1A-210ENST00000557206 ZANQ9Y493 2812 aa1.07□□□□□ -2.24
HIF1A-210ENST00000557206 RPL39P5Q59GN2 51 aa1.07□□□□□ -2.24
HIF1A-210ENST00000557206 PDZD2O15018 2839 aa1.07□□□□□ -2.24
HIF1A-210ENST00000557206 NIPBLQ6KC79 2804 aaeCLIP1.07□□□□□ -2.24
HIF1A-210ENST00000557206 MXRA5Q9NR99 2828 aa1.07□□□□□ -2.24
HIF1A-210ENST00000557206 WNK1Q9H4A3 2382 aa1.07□□□□□ -2.24
HIF1A-210ENST00000557206 STAB1Q9NY15 2570 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 OTOGQ6ZRI0 2925 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 BSNQ9UPA5 3926 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 H0YAA0 97 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 H3BUA1 57 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 IAPPP10997 89 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 SPRR1AP35321 89 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 PRCDQ00LT1 54 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 H1FX-AS1Q4G0G2 97 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 DEFB105AQ8NG35 78 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 TMEM167AQ8TBQ9 72 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 HIVEP1P15822 2718 aa1.06□□□□□ -2.24
HIF1A-210ENST00000557206 COL6A5A8TX70 2615 aa1.05□□□□□ -2.24
HIF1A-210ENST00000557206 NDUFA1O15239 70 aa1.05□□□□□ -2.24
HIF1A-210ENST00000557206 APELAP0DMC3 54 aa1.05□□□□□ -2.24
HIF1A-210ENST00000557206 WFDC13Q8IUB5 93 aa1.05□□□□□ -2.24
HIF1A-210ENST00000557206 TNCP24821 2201 aa1.05□□□□□ -2.24
HIF1A-210ENST00000557206 NF1P21359 2839 aa1.05□□□□□ -2.24
HIF1A-210ENST00000557206 CSMD2Q7Z408 3487 aa1.05□□□□□ -2.24
HIF1A-210ENST00000557206 FBN2P35556 2912 aa1.04□□□□□ -2.24
HIF1A-210ENST00000557206 A0A0D9SG42 100 aa1.04□□□□□ -2.24
HIF1A-210ENST00000557206 SPRR1BP22528 89 aa1.04□□□□□ -2.24
HIF1A-210ENST00000557206 CSMD1Q96PZ7 3565 aa1.03□□□□□ -2.24
HIF1A-210ENST00000557206 MGAM2Q2M2H8 2515 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms