RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SSBP3-AS1Q7Z2R9 100 aa5.97□□□□□ -1.45
SRP54-208ENST00000555557 MYCBP2O75592 4640 aa5.96□□□□□ -1.46
SRP54-208ENST00000555557 FAT3Q8TDW7 4589 aa5.95□□□□□ -1.46
SRP54-208ENST00000555557 HERC1Q15751 4861 aa5.95□□□□□ -1.46
SRP54-208ENST00000555557 TNXBP22105 4242 aa5.94□□□□□ -1.46
SRP54-208ENST00000555557 A0A087WSZ3 146 aa5.93□□□□□ -1.46
SRP54-208ENST00000555557 FP248Q71RG6 208 aaPredicted RBP5.93□□□□□ -1.46
SRP54-208ENST00000555557 CXCL6P80162 114 aa5.92□□□□□ -1.46
SRP54-208ENST00000555557 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
SRP54-208ENST00000555557 C1orf195Q5TG92 126 aa5.91□□□□□ -1.46
SRP54-208ENST00000555557 SNURFQ9Y675 71 aa5.91□□□□□ -1.46
SRP54-208ENST00000555557 V9GYY9 64 aa5.91□□□□□ -1.46
SRP54-208ENST00000555557 C4orf48Q5BLP8 95 aa5.89□□□□□ -1.47
SRP54-208ENST00000555557 Q6ZVQ6 151 aa5.89□□□□□ -1.47
SRP54-208ENST00000555557 LINC00304Q8N9R0 145 aa5.89□□□□□ -1.47
SRP54-208ENST00000555557 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
SRP54-208ENST00000555557 SEC61GP60059 68 aa5.88□□□□□ -1.47
SRP54-208ENST00000555557 CD164Q04900 197 aa5.88□□□□□ -1.47
SRP54-208ENST00000555557 NREPQ16612 68 aa5.87□□□□□ -1.47
SRP54-208ENST00000555557 A0A1B0GW54 56 aa5.87□□□□□ -1.47
SRP54-208ENST00000555557 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
SRP54-208ENST00000555557 DEFB116Q30KQ4 102 aa5.87□□□□□ -1.47
SRP54-208ENST00000555557 SPINK1P00995 79 aa5.86□□□□□ -1.47
SRP54-208ENST00000555557 DMBT1Q9UGM3 2413 aaPredicted RBP5.85□□□□□ -1.47
SRP54-208ENST00000555557 SPAG11AQ6PDA7 123 aa5.84□□□□□ -1.47
SRP54-208ENST00000555557 TMEM254Q8TBM7 123 aa5.84□□□□□ -1.48
SRP54-208ENST00000555557 A0A0U1RQV1 116 aa5.83□□□□□ -1.48
SRP54-208ENST00000555557 LINC00472Q9H8W2 130 aa5.83□□□□□ -1.48
SRP54-208ENST00000555557 Q96NJ1 140 aa5.82□□□□□ -1.48
SRP54-208ENST00000555557 KRTAP29-1A8MX34 341 aaPredicted RBP5.82□□□□□ -1.48
SRP54-208ENST00000555557 BPY2O14599 106 aa5.82□□□□□ -1.48
SRP54-208ENST00000555557 MPLKIPQ8TAP9 179 aa5.81□□□□□ -1.48
SRP54-208ENST00000555557 LIMD2Q9BT23 127 aa5.81□□□□□ -1.48
SRP54-208ENST00000555557 RPS29P62273 56 aaKnown RBP5.8□□□□□ -1.48
SRP54-208ENST00000555557 IGKV4-1P06312 121 aa5.79□□□□□ -1.48
SRP54-208ENST00000555557 RETNLBQ9BQ08 111 aa5.79□□□□□ -1.48
SRP54-208ENST00000555557 ASB16-AS1Q495Z4 193 aa5.78□□□□□ -1.48
SRP54-208ENST00000555557 Q8N9L7 120 aa5.78□□□□□ -1.48
SRP54-208ENST00000555557 J3QL48 77 aa5.78□□□□□ -1.48
SRP54-208ENST00000555557 DSCR10P59022 87 aa5.78□□□□□ -1.48
SRP54-208ENST00000555557 PRR15Q8IV56 129 aa5.78□□□□□ -1.48
SRP54-208ENST00000555557 OCR1Q9BZK8 76 aa5.76□□□□□ -1.49
SRP54-208ENST00000555557 K7EQZ3 153 aa5.75□□□□□ -1.49
SRP54-208ENST00000555557 PMAIP1Q13794 54 aa5.74□□□□□ -1.49
SRP54-208ENST00000555557 Q1T7F1 81 aa5.74□□□□□ -1.49
SRP54-208ENST00000555557 hDV103S1A0JD37 113 aa5.73□□□□□ -1.49
SRP54-208ENST00000555557 A8MWP4 228 aa5.73□□□□□ -1.49
SRP54-208ENST00000555557 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
SRP54-208ENST00000555557 IGHV6-1A0A0B4J1U7 121 aa5.71□□□□□ -1.5
SRP54-208ENST00000555557 NDUFB1O75438 58 aa5.7□□□□□ -1.5
SRP54-208ENST00000555557 NOTCH2NLQ7Z3S9 236 aa5.7□□□□□ -1.5
SRP54-208ENST00000555557 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
SRP54-208ENST00000555557 LCE2BO14633 110 aa5.67□□□□□ -1.5
SRP54-208ENST00000555557 PRR4Q16378 134 aa5.66□□□□□ -1.5
SRP54-208ENST00000555557 C1orf64Q8NEQ6 169 aa5.66□□□□□ -1.5
SRP54-208ENST00000555557 WFDC13Q8IUB5 93 aa5.66□□□□□ -1.5
SRP54-208ENST00000555557 CYP4F30PQ9H0H9 118 aa5.66□□□□□ -1.5
SRP54-208ENST00000555557 C8orf17Q9NRJ1 99 aa5.66□□□□□ -1.5
SRP54-208ENST00000555557 IGLV7-46A0A075B6I9 117 aa5.65□□□□□ -1.51
SRP54-208ENST00000555557 MMP24-AS1A0A0U1RRL7 71 aa5.65□□□□□ -1.51
SRP54-208ENST00000555557 C9orf92A6NGG3 77 aa5.65□□□□□ -1.51
SRP54-208ENST00000555557 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
SRP54-208ENST00000555557 LINC00313P59037 77 aa5.64□□□□□ -1.51
SRP54-208ENST00000555557 ZCCHC13Q8WW36 166 aaKnown RBP5.64□□□□□ -1.51
SRP54-208ENST00000555557 HCG22E2RYF7 251 aa5.64□□□□□ -1.51
SRP54-208ENST00000555557 TRAV22A0A0B4J277 110 aa5.63□□□□□ -1.51
SRP54-208ENST00000555557 CASC2Q6XLA1 102 aa5.62□□□□□ -1.51
SRP54-208ENST00000555557 LPAP08519 4548 aa5.61□□□□□ -1.51
SRP54-208ENST00000555557 C8orf87E5RJ46 101 aa5.61□□□□□ -1.51
SRP54-208ENST00000555557 PSPHP1O15172 72 aa5.61□□□□□ -1.51
SRP54-208ENST00000555557 KRTAP16-1A8MUX0 517 aa5.59□□□□□ -1.51
SRP54-208ENST00000555557 KRTAP13-3Q3SY46 172 aa5.58□□□□□ -1.52
SRP54-208ENST00000555557 MRPL34Q9BQ48 92 aaKnown RBP5.58□□□□□ -1.52
SRP54-208ENST00000555557 A8MUN3 132 aa5.56□□□□□ -1.52
SRP54-208ENST00000555557 NDUFS5O43920 106 aa5.56□□□□□ -1.52
SRP54-208ENST00000555557 MP68P56378 58 aa5.54□□□□□ -1.52
SRP54-208ENST00000555557 Q5VV11 94 aa5.54□□□□□ -1.52
SRP54-208ENST00000555557 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
SRP54-208ENST00000555557 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
SRP54-208ENST00000555557 Q8N9P0 234 aaPredicted RBP5.54□□□□□ -1.52
SRP54-208ENST00000555557 XP32Q5T750 250 aa5.53□□□□□ -1.52
SRP54-208ENST00000555557 SPANXA2-OT1Q8N9U9 137 aa5.53□□□□□ -1.52
SRP54-208ENST00000555557 LRP2P98164 4655 aa5.53□□□□□ -1.52
SRP54-208ENST00000555557 CHKB-CPT1BH3BT56 60 aa5.52□□□□□ -1.53
SRP54-208ENST00000555557 H3BPC8 53 aa5.52□□□□□ -1.53
SRP54-208ENST00000555557 ATP11AUNQ6ZP68 121 aa5.51□□□□□ -1.53
SRP54-208ENST00000555557 A8MUU9 505 aa5.5□□□□□ -1.53
SRP54-208ENST00000555557 C20orf166-AS1Q96NR2 134 aa5.5□□□□□ -1.53
SRP54-208ENST00000555557 LINC00208Q96KT6 92 aa5.5□□□□□ -1.53
SRP54-208ENST00000555557 PRR15LQ9BU68 103 aa5.48□□□□□ -1.53
SRP54-208ENST00000555557 RBM12B-AS1Q9P1G2 102 aa5.48□□□□□ -1.53
SRP54-208ENST00000555557 Q5W150 140 aa5.48□□□□□ -1.53
SRP54-208ENST00000555557 Q75L30 129 aa5.48□□□□□ -1.53
SRP54-208ENST00000555557 RNF213Q63HN8 5207 aa5.47□□□□□ -1.53
SRP54-208ENST00000555557 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.53
SRP54-208ENST00000555557 TP53AIP1Q9HCN2 124 aa5.46□□□□□ -1.53
SRP54-208ENST00000555557 LOC101927531A0A1B0GV80 90 aa5.46□□□□□ -1.54
SRP54-208ENST00000555557 SPTSSBQ8NFR3 76 aa5.46□□□□□ -1.54
SRP54-208ENST00000555557 A8MU10 97 aa5.44□□□□□ -1.54
SRP54-208ENST00000555557 H0Y9P7 68 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms