RNA–Protein interactions for RNA: ENST00000555155.5

RCCD1-203, Transcript of RCC1 domain containing 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RCCD1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-203ENST00000555155 Q5XG85 94 aa13.72□□□□□ -0.21
RCCD1-203ENST00000555155 IGHV6-1A0A0B4J1U7 121 aa13.71□□□□□ -0.21
RCCD1-203ENST00000555155 C1orf195Q5TG92 126 aa13.71□□□□□ -0.21
RCCD1-203ENST00000555155 A0A1B0GVX0 72 aa13.67□□□□□ -0.22
RCCD1-203ENST00000555155 SPAG11AQ6PDA7 123 aa13.67□□□□□ -0.22
RCCD1-203ENST00000555155 KRTAP10-8P60410 259 aa13.66□□□□□ -0.22
RCCD1-203ENST00000555155 MMP24-AS1A0A0U1RRL7 71 aa13.64□□□□□ -0.23
RCCD1-203ENST00000555155 CASC2Q6XLA1 102 aa13.63□□□□□ -0.23
RCCD1-203ENST00000555155 NOTCH2NLQ7Z3S9 236 aa13.63□□□□□ -0.23
RCCD1-203ENST00000555155 CCDC179H3BU77 68 aa13.61□□□□□ -0.23
RCCD1-203ENST00000555155 MT1HL1P0DM35 61 aa13.61□□□□□ -0.23
RCCD1-203ENST00000555155 SERP2Q8N6R1 65 aa13.61□□□□□ -0.23
RCCD1-203ENST00000555155 C8orf17Q9NRJ1 99 aa13.61□□□□□ -0.23
RCCD1-203ENST00000555155 KRTAP29-1A8MX34 341 aaPredicted RBP13.59□□□□□ -0.23
RCCD1-203ENST00000555155 OXTP01178 125 aa13.59□□□□□ -0.23
RCCD1-203ENST00000555155 RPS29P62273 56 aaKnown RBP13.59□□□□□ -0.23
RCCD1-203ENST00000555155 COX7CP15954 63 aa13.57□□□□□ -0.24
RCCD1-203ENST00000555155 hDV103S1A0JD37 113 aa13.56□□□□□ -0.24
RCCD1-203ENST00000555155 TRAV7A0A075B6U4 112 aa13.55□□□□□ -0.24
RCCD1-203ENST00000555155 OCR1Q9BZK8 76 aa13.55□□□□□ -0.24
RCCD1-203ENST00000555155 SMIM20Q8N5G0 67 aa13.53□□□□□ -0.24
RCCD1-203ENST00000555155 PCLOQ9Y6V0 5065 aa13.53□□□□□ -0.24
RCCD1-203ENST00000555155 RETNLBQ9BQ08 111 aa13.51□□□□□ -0.25
RCCD1-203ENST00000555155 UQCRQO14949 82 aa13.5□□□□□ -0.25
RCCD1-203ENST00000555155 DMBT1Q9UGM3 2413 aaPredicted RBP13.47□□□□□ -0.25
RCCD1-203ENST00000555155 LINC00313P59037 77 aa13.44□□□□□ -0.26
RCCD1-203ENST00000555155 C8orf87E5RJ46 101 aa13.43□□□□□ -0.26
RCCD1-203ENST00000555155 MRPL34Q9BQ48 92 aaKnown RBP13.42□□□□□ -0.26
RCCD1-203ENST00000555155 NDUFS5O43920 106 aa13.42□□□□□ -0.26
RCCD1-203ENST00000555155 C20orf197Q8N268 126 aa13.42□□□□□ -0.26
RCCD1-203ENST00000555155 TMEM254Q8TBM7 123 aa13.42□□□□□ -0.26
RCCD1-203ENST00000555155 J3QL48 77 aa13.39□□□□□ -0.27
RCCD1-203ENST00000555155 CYSTM1Q9H1C7 97 aa13.38□□□□□ -0.27
RCCD1-203ENST00000555155 SNURFQ9Y675 71 aa13.36□□□□□ -0.27
RCCD1-203ENST00000555155 KRTAP16-1A8MUX0 517 aa13.31□□□□□ -0.28
RCCD1-203ENST00000555155 C9orf92A6NGG3 77 aa13.3□□□□□ -0.28
RCCD1-203ENST00000555155 C5orf47Q569G3 176 aa13.26□□□□□ -0.29
RCCD1-203ENST00000555155 H0Y9P7 68 aa13.25□□□□□ -0.29
RCCD1-203ENST00000555155 TP53AIP1Q9HCN2 124 aa13.25□□□□□ -0.29
RCCD1-203ENST00000555155 A0A0U1RQV1 116 aa13.24□□□□□ -0.29
RCCD1-203ENST00000555155 KLKP1Q107X0 134 aa13.22□□□□□ -0.29
RCCD1-203ENST00000555155 TRAV22A0A0B4J277 110 aa13.21□□□□□ -0.29
RCCD1-203ENST00000555155 Q8N9P0 234 aaPredicted RBP13.21□□□□□ -0.29
RCCD1-203ENST00000555155 MP68P56378 58 aa13.21□□□□□ -0.3
RCCD1-203ENST00000555155 LINC00208Q96KT6 92 aa13.19□□□□□ -0.3
RCCD1-203ENST00000555155 Q5W150 140 aa13.18□□□□□ -0.3
RCCD1-203ENST00000555155 HERC1Q15751 4861 aa13.16□□□□□ -0.3
RCCD1-203ENST00000555155 FP248Q71RG6 208 aaPredicted RBP13.12□□□□□ -0.31
RCCD1-203ENST00000555155 ZCCHC13Q8WW36 166 aaKnown RBP13.12□□□□□ -0.31
RCCD1-203ENST00000555155 IGLV7-46A0A075B6I9 117 aa13.11□□□□□ -0.31
RCCD1-203ENST00000555155 C1orf64Q8NEQ6 169 aa13.11□□□□□ -0.31
RCCD1-203ENST00000555155 H7BZZ5 65 aa13.1□□□□□ -0.31
RCCD1-203ENST00000555155 PRR4Q16378 134 aa13.08□□□□□ -0.32
RCCD1-203ENST00000555155 KRTAP13-3Q3SY46 172 aa13.08□□□□□ -0.32
RCCD1-203ENST00000555155 H3BPC8 53 aa13.04□□□□□ -0.32
RCCD1-203ENST00000555155 NDUFC1O43677 76 aa13.02□□□□□ -0.33
RCCD1-203ENST00000555155 C20orf166-AS1Q96NR2 134 aa13.01□□□□□ -0.33
RCCD1-203ENST00000555155 A8MUU9 505 aa13□□□□□ -0.33
RCCD1-203ENST00000555155 TMEM258P61165 79 aa12.98□□□□□ -0.33
RCCD1-203ENST00000555155 PCOTHQ58A44 107 aa12.96□□□□□ -0.33
RCCD1-203ENST00000555155 LPAP08519 4548 aa12.95□□□□□ -0.34
RCCD1-203ENST00000555155 LOC101927531A0A1B0GV80 90 aa12.92□□□□□ -0.34
RCCD1-203ENST00000555155 FAM236DA0A1B0GTK5 79 aa12.9□□□□□ -0.34
RCCD1-203ENST00000555155 FAM236CP0DP71 79 aa12.9□□□□□ -0.34
RCCD1-203ENST00000555155 XP32Q5T750 250 aa12.9□□□□□ -0.34
RCCD1-203ENST00000555155 Q75L30 129 aa12.89□□□□□ -0.35
RCCD1-203ENST00000555155 IGKV2D-30A0A075B6S6 120 aa12.88□□□□□ -0.35
RCCD1-203ENST00000555155 IGKV2-30P06310 120 aa12.88□□□□□ -0.35
RCCD1-203ENST00000555155 CYP4F30PQ9H0H9 118 aa12.88□□□□□ -0.35
RCCD1-203ENST00000555155 HMCN2Q8NDA2 5059 aa12.87□□□□□ -0.35
RCCD1-203ENST00000555155 TPRXLQ17RH7 258 aa12.84□□□□□ -0.35
RCCD1-203ENST00000555155 RPL37P61927 97 aaKnown RBP12.8□□□□□ -0.36
RCCD1-203ENST00000555155 LRP2P98164 4655 aa12.78□□□□□ -0.36
RCCD1-203ENST00000555155 ATP11AUNQ6ZP68 121 aa12.75□□□□□ -0.37
RCCD1-203ENST00000555155 ATP5EP56381 51 aaPredicted RBP12.72□□□□□ -0.37
RCCD1-203ENST00000555155 C7orf65Q6ZTY9 151 aa12.72□□□□□ -0.37
RCCD1-203ENST00000555155 HRES1P13985 223 aa12.71□□□□□ -0.37
RCCD1-203ENST00000555155 SPANXA2-OT1Q8N9U9 137 aa12.71□□□□□ -0.37
RCCD1-203ENST00000555155 SPINK7P58062 85 aa12.64□□□□□ -0.39
RCCD1-203ENST00000555155 SERP1Q9Y6X1 66 aa12.59□□□□□ -0.39
RCCD1-203ENST00000555155 C4orf26Q17RF5 130 aa12.54□□□□□ -0.4
RCCD1-203ENST00000555155 RPS28P62857 69 aaKnown RBP12.5□□□□□ -0.41
RCCD1-203ENST00000555155 DMAC1Q96GE9 116 aa12.46□□□□□ -0.42
RCCD1-203ENST00000555155 COA5Q86WW8 74 aa12.44□□□□□ -0.42
RCCD1-203ENST00000555155 MUC17Q685J3 4493 aa12.42□□□□□ -0.42
RCCD1-203ENST00000555155 ACYP2P14621 99 aa12.38□□□□□ -0.43
RCCD1-203ENST00000555155 SEC61BP60468 96 aaKnown RBP12.38□□□□□ -0.43
RCCD1-203ENST00000555155 UBR4Q5T4S7 5183 aa12.38□□□□□ -0.43
RCCD1-203ENST00000555155 KRTAP3-1Q9BYR8 98 aa12.34□□□□□ -0.43
RCCD1-203ENST00000555155 COX6B2Q6YFQ2 88 aa12.28□□□□□ -0.44
RCCD1-203ENST00000555155 MUC2Q02817 5179 aa12.27□□□□□ -0.45
RCCD1-203ENST00000555155 CHKB-CPT1BH3BT56 60 aa12.25□□□□□ -0.45
RCCD1-203ENST00000555155 KRTAP4-1Q9BYQ7 146 aa12.25□□□□□ -0.45
RCCD1-203ENST00000555155 SMIM26A0A096LP01 95 aa12.25□□□□□ -0.45
RCCD1-203ENST00000555155 A8MUN3 132 aa12.25□□□□□ -0.45
RCCD1-203ENST00000555155 MPLKIPQ8TAP9 179 aa12.19□□□□□ -0.46
RCCD1-203ENST00000555155 SVIPQ8NHG7 77 aa12.17□□□□□ -0.46
RCCD1-203ENST00000555155 RNF213Q63HN8 5207 aa12.15□□□□□ -0.46
RCCD1-203ENST00000555155 RBM12B-AS1Q9P1G2 102 aa12.09□□□□□ -0.47
RCCD1-203ENST00000555155 Q1T7F1 81 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms