RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 DNAH2Q9P225 4427 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 IGLV1-50A0A075B6I6 118 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 IGLV5-45A0A087WSX0 123 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 KRTAP29-1A8MX34 341 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-205ENST00000554081 COX8AP10176 69 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 SERP2Q8N6R1 65 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 Q8NDZ9 215 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 KRTAP23-1A1A580 65 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 COX6CP09669 75 aa1.49□□□□□ -2.17
PRPF39-205ENST00000554081 HSPG2P98160 4391 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 TIMM17BO60830 172 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 SOSTDC1Q6X4U4 206 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 OBSCN-AS1Q96MR7 158 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 TRAV12-1A0A0B4J245 112 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 KRTAP4-16G5E9R7 235 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-205ENST00000554081 IGLV6-57P01721 117 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 ACYP1P07311 99 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 COX17Q14061 63 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 Q1T7F1 81 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 ATP11AUNQ6ZP68 121 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 KRTAP7-1Q8IUC3 87 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 SMIM11BQ8TCY0 68 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 CYSTM1Q9H1C7 97 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 HIGD1BQ9P298 99 aa1.48□□□□□ -2.17
PRPF39-205ENST00000554081 A0A087WSZ3 146 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 TRAV13-2A0A0B4J235 113 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 CCKP06307 115 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 CLEC2BQ92478 149 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 SPRR4Q96PI1 79 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 IGLV5-39A0A0G2JS06 123 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 Q96NJ1 140 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 MUC2Q02817 5179 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 IGLV5-37A0A075B6J1 123 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 NDUFC1O43677 76 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 TLX1NBP0CAT3 122 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 LINC01547P58512 204 aaPredicted RBP1.47□□□□□ -2.17
PRPF39-205ENST00000554081 Q6ZRX8 168 aa1.47□□□□□ -2.17
PRPF39-205ENST00000554081 TEX49A0A1B0GTD5 131 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 MT1HL1P0DM35 61 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP13-2Q52LG2 175 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 PCOTHQ58A44 107 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 LINC00643Q86TS7 51 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 DHRS4-AS1Q9P1J3 65 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 DNAH8Q96JB1 4490 aa1.46□□□□□ -2.18
PRPF39-205ENST00000554081 IGKV4-1P06312 121 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 RBM3P98179 157 aaKnown RBP1.45□□□□□ -2.18
PRPF39-205ENST00000554081 H7BZZ5 65 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 LIMD2Q9BT23 127 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 FAT2Q9NYQ8 4349 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 ALMS1Q8TCU4 4167 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP16-1A8MUX0 517 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 KLKP1Q107X0 134 aa1.45□□□□□ -2.18
PRPF39-205ENST00000554081 SPINK1P00995 79 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP1-4P0C5Y4 121 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 FXYD2P54710 66 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP10-8P60410 259 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 SPAG11AQ6PDA7 123 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.44□□□□□ -2.18
PRPF39-205ENST00000554081 KCNQ1DNQ9H478 68 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 PRO1854Q9UHT4 67 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 DSCR10P59022 87 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 MPLKIPQ8TAP9 179 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 OCR1Q9BZK8 76 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 CFC1BP0CG36 223 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 CFC1P0CG37 223 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 SSBP3-AS1Q7Z2R9 100 aa1.44□□□□□ -2.18
PRPF39-205ENST00000554081 DNAH17Q9UFH2 4485 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 ORMDL1Q9P0S3 153 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 TRBV10-2A0A0K0K1G8 114 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 NDUFB1O75438 58 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 BAALC-AS2P0C853 105 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP10-4P60372 401 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-205ENST00000554081 WFDC13Q8IUB5 93 aa1.43□□□□□ -2.18
PRPF39-205ENST00000554081 IGKV2D-30A0A075B6S6 120 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 IGKV2-30P06310 120 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 CYP4F30PQ9H0H9 118 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 C14orf132Q9NPU4 83 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 Q8N377 158 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 LPAP08519 4548 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 ELOF1P60002 83 aaKnown RBP1.42□□□□□ -2.18
PRPF39-205ENST00000554081 NREPQ16612 68 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 LINC00575Q6W349 94 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 PRAC1Q96KF2 57 aa1.42□□□□□ -2.18
PRPF39-205ENST00000554081 HECTD4Q9Y4D8 3996 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 A0A0B4J2C4 111 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 H0YGX0 51 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 ATXN8Q156A1 80 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 FAM229BQ4G0N7 80 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 Q6JHZ5 121 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 IGFL1Q6UW32 110 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 SPTSSBQ8NFR3 76 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 C8orf17Q9NRJ1 99 aa1.41□□□□□ -2.18
PRPF39-205ENST00000554081 PKD1P98161 4303 aa1.4□□□□□ -2.18
PRPF39-205ENST00000554081 TRAV7A0A075B6U4 112 aa1.4□□□□□ -2.18
PRPF39-205ENST00000554081 hDV103S1A0JD37 113 aa1.4□□□□□ -2.18
PRPF39-205ENST00000554081 KRTAP10-7P60409 375 aaPredicted RBP1.4□□□□□ -2.18
PRPF39-205ENST00000554081 Q8N9L7 120 aa1.4□□□□□ -2.18
PRPF39-205ENST00000554081 CDC42SE1Q9NRR8 79 aa1.4□□□□□ -2.18
PRPF39-205ENST00000554081 LITAFQ99732 161 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms