RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 LTN1O94822 1766 aa-0.03□□□□□ -2.41
LSM6P2-201ENST00000552208 TRIOO75962 3097 aa-0.03□□□□□ -2.41
LSM6P2-201ENST00000552208 PRUNE2Q8WUY3 3088 aa-0.03□□□□□ -2.41
LSM6P2-201ENST00000552208 PKD1P98161 4303 aa-0.03□□□□□ -2.41
LSM6P2-201ENST00000552208 ATMQ13315 3056 aa-0.03□□□□□ -2.41
LSM6P2-201ENST00000552208 CCDC88BA6NC98 1476 aa-0.03□□□□□ -2.41
LSM6P2-201ENST00000552208 NDUFA3O95167 84 aa-0.04□□□□□ -2.42
LSM6P2-201ENST00000552208 NWD1Q149M9 1564 aa-0.04□□□□□ -2.42
LSM6P2-201ENST00000552208 ZZEF1O43149 2961 aa-0.04□□□□□ -2.42
LSM6P2-201ENST00000552208 DYNC1H1Q14204 4646 aaKnown RBP-0.05□□□□□ -2.42
LSM6P2-201ENST00000552208 UMAD1C9J7I0 102 aa-0.05□□□□□ -2.42
LSM6P2-201ENST00000552208 TIAM2Q8IVF5 1701 aa-0.05□□□□□ -2.42
LSM6P2-201ENST00000552208 KRTAP20-2Q3LI61 65 aa-0.06□□□□□ -2.42
LSM6P2-201ENST00000552208 KNL1Q8NG31 2342 aa-0.06□□□□□ -2.42
LSM6P2-201ENST00000552208 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.06□□□□□ -2.42
LSM6P2-201ENST00000552208 DNAH7Q8WXX0 4024 aa-0.06□□□□□ -2.42
LSM6P2-201ENST00000552208 CD163L1Q9NR16 1453 aa-0.07□□□□□ -2.42
LSM6P2-201ENST00000552208 HMGA1P17096 107 aaKnown RBP-0.07□□□□□ -2.42
LSM6P2-201ENST00000552208 C18orf32Q8TCD1 76 aa-0.07□□□□□ -2.42
LSM6P2-201ENST00000552208 CICQ96RK0 1608 aaPredicted RBP-0.07□□□□□ -2.42
LSM6P2-201ENST00000552208 MAP3K1Q13233 1512 aa-0.08□□□□□ -2.42
LSM6P2-201ENST00000552208 ARFGEF2Q9Y6D5 1785 aa-0.08□□□□□ -2.42
LSM6P2-201ENST00000552208 SMIM13P0DJ93 91 aa-0.08□□□□□ -2.42
LSM6P2-201ENST00000552208 NESP48681 1621 aa-0.09□□□□□ -2.42
LSM6P2-201ENST00000552208 GOLGB1Q14789 3259 aaKnown RBP-0.09□□□□□ -2.42
LSM6P2-201ENST00000552208 IFI27P40305 119 aaPredicted RBP-0.09□□□□□ -2.42
LSM6P2-201ENST00000552208 NREPQ16612 68 aa-0.09□□□□□ -2.42
LSM6P2-201ENST00000552208 DEFB135Q30KP9 77 aa-0.09□□□□□ -2.42
LSM6P2-201ENST00000552208 LYSTQ99698 3801 aa-0.09□□□□□ -2.42
LSM6P2-201ENST00000552208 ABCA8O94911 1581 aa-0.1□□□□□ -2.42
LSM6P2-201ENST00000552208 FAT1Q14517 4588 aa-0.1□□□□□ -2.43
LSM6P2-201ENST00000552208 ANKARQ7Z5J8 1434 aa-0.1□□□□□ -2.43
LSM6P2-201ENST00000552208 ACACAQ13085 2346 aa-0.1□□□□□ -2.43
LSM6P2-201ENST00000552208 PTPN23Q9H3S7 1636 aa-0.1□□□□□ -2.43
LSM6P2-201ENST00000552208 A0A087WXM4 84 aa-0.11□□□□□ -2.43
LSM6P2-201ENST00000552208 ADAMTS12P58397 1594 aa-0.11□□□□□ -2.43
LSM6P2-201ENST00000552208 NDUFA4O00483 81 aa-0.12□□□□□ -2.43
LSM6P2-201ENST00000552208 SPRR2FQ96RM1 72 aa-0.12□□□□□ -2.43
LSM6P2-201ENST00000552208 FLGP20930 4061 aaPredicted RBP-0.13□□□□□ -2.43
LSM6P2-201ENST00000552208 WIZO95785 1651 aa-0.13□□□□□ -2.43
LSM6P2-201ENST00000552208 C4AP0C0L4 1744 aa-0.13□□□□□ -2.43
LSM6P2-201ENST00000552208 C4BP0C0L5 1744 aa-0.13□□□□□ -2.43
LSM6P2-201ENST00000552208 DNAH1Q9P2D7 4330 aa-0.14□□□□□ -2.43
LSM6P2-201ENST00000552208 SCN11AQ9UI33 1791 aa-0.14□□□□□ -2.43
LSM6P2-201ENST00000552208 KRTAP6-1Q3LI64 71 aa-0.14□□□□□ -2.43
LSM6P2-201ENST00000552208 PLXNC1O60486 1568 aa-0.15□□□□□ -2.43
LSM6P2-201ENST00000552208 ANKRD50Q9ULJ7 1429 aa-0.15□□□□□ -2.43
LSM6P2-201ENST00000552208 CFAP43Q8NDM7 1665 aa-0.16□□□□□ -2.44
LSM6P2-201ENST00000552208 C3orf79P0CE67 100 aa-0.16□□□□□ -2.44
LSM6P2-201ENST00000552208 PRO3102Q9H379 93 aa-0.16□□□□□ -2.44
LSM6P2-201ENST00000552208 DNAH5Q8TE73 4624 aa-0.17□□□□□ -2.44
LSM6P2-201ENST00000552208 H0YAA0 97 aa-0.17□□□□□ -2.44
LSM6P2-201ENST00000552208 PKHD1L1Q86WI1 4243 aa-0.17□□□□□ -2.44
LSM6P2-201ENST00000552208 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.18□□□□□ -2.44
LSM6P2-201ENST00000552208 DNAH9Q9NYC9 4486 aa-0.19□□□□□ -2.44
LSM6P2-201ENST00000552208 PLECQ15149 4684 aaKnown RBP-0.19□□□□□ -2.44
LSM6P2-201ENST00000552208 LINC00158P58513 81 aa-0.19□□□□□ -2.44
LSM6P2-201ENST00000552208 PLCH1Q4KWH8 1693 aa-0.19□□□□□ -2.44
LSM6P2-201ENST00000552208 CMYA5Q8N3K9 4069 aa-0.19□□□□□ -2.44
LSM6P2-201ENST00000552208 AKAP9Q99996 3911 aa-0.19□□□□□ -2.44
LSM6P2-201ENST00000552208 RICTORQ6R327 1708 aa-0.2□□□□□ -2.44
LSM6P2-201ENST00000552208 TRRAPQ9Y4A5 3859 aa-0.2□□□□□ -2.44
LSM6P2-201ENST00000552208 DMDP11532 3685 aa-0.2□□□□□ -2.44
LSM6P2-201ENST00000552208 MUC17Q685J3 4493 aa-0.21□□□□□ -2.44
LSM6P2-201ENST00000552208 VPS13BQ7Z7G8 4022 aa-0.21□□□□□ -2.44
LSM6P2-201ENST00000552208 SMR3BP02814 79 aaPredicted RBP-0.21□□□□□ -2.44
LSM6P2-201ENST00000552208 DEPDC5O75140 1603 aa-0.21□□□□□ -2.44
LSM6P2-201ENST00000552208 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.22□□□□□ -2.44
LSM6P2-201ENST00000552208 KIAA0586Q9BVV6 1533 aa-0.22□□□□□ -2.44
LSM6P2-201ENST00000552208 APOBP04114 4563 aaKnown RBP-0.22□□□□□ -2.45
LSM6P2-201ENST00000552208 LMTK2Q8IWU2 1503 aa-0.23□□□□□ -2.45
LSM6P2-201ENST00000552208 ANK3Q12955 4377 aaKnown RBP-0.23□□□□□ -2.45
LSM6P2-201ENST00000552208 LYNX1G3V0Z9 82 aa-0.23□□□□□ -2.45
LSM6P2-201ENST00000552208 SACSQ9NZJ4 4579 aa-0.23□□□□□ -2.45
LSM6P2-201ENST00000552208 DEFB131BA0A096LNP1 70 aa-0.24□□□□□ -2.45
LSM6P2-201ENST00000552208 KCNQ1DNQ9H478 68 aa-0.24□□□□□ -2.45
LSM6P2-201ENST00000552208 DNAH6Q9C0G6 4158 aa-0.24□□□□□ -2.45
LSM6P2-201ENST00000552208 LRRIQ1Q96JM4 1722 aa-0.24□□□□□ -2.45
LSM6P2-201ENST00000552208 DNAH3Q8TD57 4116 aa-0.24□□□□□ -2.45
LSM6P2-201ENST00000552208 KRTAP6-2Q3LI66 62 aa-0.25□□□□□ -2.45
LSM6P2-201ENST00000552208 IQGAP3Q86VI3 1631 aa-0.25□□□□□ -2.45
LSM6P2-201ENST00000552208 RNF17Q9BXT8 1623 aaKnown RBP-0.26□□□□□ -2.45
LSM6P2-201ENST00000552208 RALGAPBQ86X10 1494 aa-0.26□□□□□ -2.45
LSM6P2-201ENST00000552208 DEFA5Q01523 94 aa-0.26□□□□□ -2.45
LSM6P2-201ENST00000552208 TJP1Q07157 1748 aa-0.27□□□□□ -2.45
LSM6P2-201ENST00000552208 DDX60LQ5H9U9 1706 aaKnown RBP-0.27□□□□□ -2.45
LSM6P2-201ENST00000552208 MYO5CQ9NQX4 1742 aa-0.27□□□□□ -2.45
LSM6P2-201ENST00000552208 UGGT2Q9NYU1 1516 aa-0.27□□□□□ -2.45
LSM6P2-201ENST00000552208 HFM1A2PYH4 1435 aa-0.28□□□□□ -2.45
LSM6P2-201ENST00000552208 DNAH10Q8IVF4 4471 aa-0.28□□□□□ -2.45
LSM6P2-201ENST00000552208 H0YGG7 62 aa-0.28□□□□□ -2.45
LSM6P2-201ENST00000552208 MT1HP80294 61 aa-0.28□□□□□ -2.45
LSM6P2-201ENST00000552208 DIP2AQ14689 1571 aa-0.28□□□□□ -2.45
LSM6P2-201ENST00000552208 CDC42BPGQ6DT37 1551 aa-0.28□□□□□ -2.45
LSM6P2-201ENST00000552208 EFCAB6Q5THR3 1501 aa-0.28□□□□□ -2.45
LSM6P2-201ENST00000552208 CLASP1Q7Z460 1538 aa-0.28□□□□□ -2.45
LSM6P2-201ENST00000552208 VPS13DQ5THJ4 4388 aa-0.29□□□□□ -2.46
LSM6P2-201ENST00000552208 H3BVH4 76 aa-0.29□□□□□ -2.46
LSM6P2-201ENST00000552208 KRTAP19-7Q3SYF9 63 aa-0.29□□□□□ -2.46
LSM6P2-201ENST00000552208 ENHOQ6UWT2 76 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms