RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 S4R3F8 94 aa7.1□□□□□ -1.27
NPC1L1-204ENST00000546276 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
NPC1L1-204ENST00000546276 A8MU10 97 aa7.08□□□□□ -1.28
NPC1L1-204ENST00000546276 KRTAP13-1Q8IUC0 172 aa7.08□□□□□ -1.28
NPC1L1-204ENST00000546276 ASPMQ8IZT6 3477 aa7.07□□□□□ -1.28
NPC1L1-204ENST00000546276 RPL37P61927 97 aaKnown RBP7.06□□□□□ -1.28
NPC1L1-204ENST00000546276 Q6ZRN7 208 aaPredicted RBP7.05□□□□□ -1.28
NPC1L1-204ENST00000546276 STAB2Q8WWQ8 2551 aa7.05□□□□□ -1.28
NPC1L1-204ENST00000546276 ROMO1P60602 79 aa7.04□□□□□ -1.28
NPC1L1-204ENST00000546276 LUZP6Q538Z0 58 aa7.04□□□□□ -1.28
NPC1L1-204ENST00000546276 ZANQ9Y493 2812 aa7.03□□□□□ -1.28
NPC1L1-204ENST00000546276 SMG1Q96Q15 3661 aaKnown RBP7.02□□□□□ -1.29
NPC1L1-204ENST00000546276 DMBT1Q9UGM3 2413 aaPredicted RBP7.01□□□□□ -1.29
NPC1L1-204ENST00000546276 CELSR2Q9HCU4 2923 aa7.01□□□□□ -1.29
NPC1L1-204ENST00000546276 HRNRQ86YZ3 2850 aaPredicted RBP7□□□□□ -1.29
NPC1L1-204ENST00000546276 CSMD1Q96PZ7 3565 aa6.99□□□□□ -1.29
NPC1L1-204ENST00000546276 CAMK2N1Q7Z7J9 78 aa6.98□□□□□ -1.29
NPC1L1-204ENST00000546276 NIPBLQ6KC79 2804 aaeCLIP6.97□□□□□ -1.29
NPC1L1-204ENST00000546276 KMT2BQ9UMN6 2715 aaPredicted RBP6.95□□□□□ -1.3
NPC1L1-204ENST00000546276 ADM2Q7Z4H4 148 aa6.94□□□□□ -1.3
NPC1L1-204ENST00000546276 LAMA5O15230 3695 aa6.92□□□□□ -1.3
NPC1L1-204ENST00000546276 TENM4Q6N022 2769 aa6.92□□□□□ -1.3
NPC1L1-204ENST00000546276 KRTAP13-2Q52LG2 175 aa6.92□□□□□ -1.3
NPC1L1-204ENST00000546276 KRTAP21-3Q3LHN1 58 aa6.91□□□□□ -1.3
NPC1L1-204ENST00000546276 NF1P21359 2839 aa6.91□□□□□ -1.3
NPC1L1-204ENST00000546276 R4GN34 69 aa6.9□□□□□ -1.3
NPC1L1-204ENST00000546276 RPS29P62273 56 aaKnown RBP6.89□□□□□ -1.31
NPC1L1-204ENST00000546276 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
NPC1L1-204ENST00000546276 FLG2Q5D862 2391 aaPredicted RBP6.89□□□□□ -1.31
NPC1L1-204ENST00000546276 FBN2P35556 2912 aa6.88□□□□□ -1.31
NPC1L1-204ENST00000546276 DCHS2Q6V1P9 2916 aa6.87□□□□□ -1.31
NPC1L1-204ENST00000546276 SPENQ96T58 3664 aaKnown RBP6.85□□□□□ -1.31
NPC1L1-204ENST00000546276 Q5VSD8 79 aa6.84□□□□□ -1.32
NPC1L1-204ENST00000546276 M0QZ58 72 aa6.82□□□□□ -1.32
NPC1L1-204ENST00000546276 CRYBG3Q68DQ2 2970 aa6.8□□□□□ -1.32
NPC1L1-204ENST00000546276 SVEP1Q4LDE5 3571 aa6.79□□□□□ -1.32
NPC1L1-204ENST00000546276 RELNP78509 3460 aa6.78□□□□□ -1.32
NPC1L1-204ENST00000546276 SEC61BP60468 96 aaKnown RBP6.78□□□□□ -1.32
NPC1L1-204ENST00000546276 A0A0A0MQY5 61 aa6.77□□□□□ -1.33
NPC1L1-204ENST00000546276 A8MUU9 505 aa6.7□□□□□ -1.34
NPC1L1-204ENST00000546276 MXRA5Q9NR99 2828 aa6.69□□□□□ -1.34
NPC1L1-204ENST00000546276 CELSR1Q9NYQ6 3014 aa6.68□□□□□ -1.34
NPC1L1-204ENST00000546276 C20orf166-AS1Q96NR2 134 aa6.67□□□□□ -1.34
NPC1L1-204ENST00000546276 BSNQ9UPA5 3926 aa6.67□□□□□ -1.34
NPC1L1-204ENST00000546276 M0R2T5 61 aa6.66□□□□□ -1.34
NPC1L1-204ENST00000546276 KRTAP1-4P0C5Y4 121 aa6.62□□□□□ -1.35
NPC1L1-204ENST00000546276 KRTAP16-1A8MUX0 517 aa6.6□□□□□ -1.35
NPC1L1-204ENST00000546276 NDUFAF8A1L188 74 aa6.58□□□□□ -1.36
NPC1L1-204ENST00000546276 H0YAA0 97 aa6.58□□□□□ -1.36
NPC1L1-204ENST00000546276 TENM3Q9P273 2699 aa6.56□□□□□ -1.36
NPC1L1-204ENST00000546276 PDZD2O15018 2839 aa6.55□□□□□ -1.36
NPC1L1-204ENST00000546276 CUBNO60494 3623 aa6.53□□□□□ -1.36
NPC1L1-204ENST00000546276 KRTAP13-3Q3SY46 172 aa6.53□□□□□ -1.36
NPC1L1-204ENST00000546276 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
NPC1L1-204ENST00000546276 OTOGQ6ZRI0 2925 aa6.47□□□□□ -1.37
NPC1L1-204ENST00000546276 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
NPC1L1-204ENST00000546276 TGP01266 2768 aa6.43□□□□□ -1.38
NPC1L1-204ENST00000546276 TENM1Q9UKZ4 2725 aa6.42□□□□□ -1.38
NPC1L1-204ENST00000546276 XP32Q5T750 250 aa6.4□□□□□ -1.38
NPC1L1-204ENST00000546276 ZFHX3Q15911 3703 aa6.36□□□□□ -1.39
NPC1L1-204ENST00000546276 TNP1P09430 55 aa6.32□□□□□ -1.4
NPC1L1-204ENST00000546276 TENM2Q9NT68 2774 aa6.32□□□□□ -1.4
NPC1L1-204ENST00000546276 CSMD2Q7Z408 3487 aa6.31□□□□□ -1.4
NPC1L1-204ENST00000546276 FBN1P35555 2871 aaKnown RBP6.31□□□□□ -1.4
NPC1L1-204ENST00000546276 VPS13CQ709C8 3753 aa6.31□□□□□ -1.4
NPC1L1-204ENST00000546276 P0C880 135 aa6.3□□□□□ -1.4
NPC1L1-204ENST00000546276 PKD1L1Q8TDX9 2849 aa6.3□□□□□ -1.4
NPC1L1-204ENST00000546276 VWFP04275 2813 aa6.3□□□□□ -1.4
NPC1L1-204ENST00000546276 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
NPC1L1-204ENST00000546276 NBPF19A0A087WUL8 3843 aa6.24□□□□□ -1.41
NPC1L1-204ENST00000546276 TPRXLQ17RH7 258 aa6.2□□□□□ -1.42
NPC1L1-204ENST00000546276 KRTAP10-8P60410 259 aa6.14□□□□□ -1.43
NPC1L1-204ENST00000546276 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
NPC1L1-204ENST00000546276 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
NPC1L1-204ENST00000546276 ANK3Q12955 4377 aaKnown RBP6.07□□□□□ -1.44
NPC1L1-204ENST00000546276 A0A1B0GVY2 172 aa6.07□□□□□ -1.44
NPC1L1-204ENST00000546276 SRRM2Q9UQ35 2752 aaKnown RBP6.06□□□□□ -1.44
NPC1L1-204ENST00000546276 ZNF469Q96JG9 3925 aaPredicted RBP6.04□□□□□ -1.44
NPC1L1-204ENST00000546276 KRTAP12-1P59990 96 aa6.03□□□□□ -1.44
NPC1L1-204ENST00000546276 FBN3Q75N90 2809 aa6.01□□□□□ -1.45
NPC1L1-204ENST00000546276 KRTAP10-6P60371 365 aaPredicted RBP5.97□□□□□ -1.45
NPC1L1-204ENST00000546276 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
NPC1L1-204ENST00000546276 AKAP9Q99996 3911 aa5.92□□□□□ -1.46
NPC1L1-204ENST00000546276 MEGF8Q7Z7M0 2845 aa5.9□□□□□ -1.47
NPC1L1-204ENST00000546276 TRRAPQ9Y4A5 3859 aa5.89□□□□□ -1.47
NPC1L1-204ENST00000546276 KRTAP10-10P60014 251 aa5.85□□□□□ -1.47
NPC1L1-204ENST00000546276 COL7A1Q02388 2944 aa5.83□□□□□ -1.48
NPC1L1-204ENST00000546276 KRTAP3-2Q9BYR7 98 aa5.79□□□□□ -1.48
NPC1L1-204ENST00000546276 KRTAP3-3Q9BYR6 98 aa5.77□□□□□ -1.49
NPC1L1-204ENST00000546276 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
NPC1L1-204ENST00000546276 PRO2289Q9P1D8 64 aa5.73□□□□□ -1.49
NPC1L1-204ENST00000546276 HUWE1Q7Z6Z7 4374 aaKnown RBP5.72□□□□□ -1.49
NPC1L1-204ENST00000546276 CSMD3Q7Z407 3707 aa5.63□□□□□ -1.51
NPC1L1-204ENST00000546276 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
NPC1L1-204ENST00000546276 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
NPC1L1-204ENST00000546276 DNAH10Q8IVF4 4471 aa5.45□□□□□ -1.54
NPC1L1-204ENST00000546276 ANK2Q01484 3957 aa5.44□□□□□ -1.54
NPC1L1-204ENST00000546276 DNHD1Q96M86 4753 aa5.43□□□□□ -1.54
NPC1L1-204ENST00000546276 DNAH9Q9NYC9 4486 aa5.43□□□□□ -1.54
NPC1L1-204ENST00000546276 KRTAP4-5Q9BYR2 181 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms