RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 OTOGQ6ZRI0 2925 aa5.22□□□□□ -1.57
ABCB1-210ENST00000543898 SRRM2Q9UQ35 2752 aaKnown RBP5.22□□□□□ -1.57
ABCB1-210ENST00000543898 SPRR1BP22528 89 aa5.21□□□□□ -1.57
ABCB1-210ENST00000543898 TENM4Q6N022 2769 aa5.21□□□□□ -1.58
ABCB1-210ENST00000543898 KMT2BQ9UMN6 2715 aaPredicted RBP5.2□□□□□ -1.58
ABCB1-210ENST00000543898 TRRAPQ9Y4A5 3859 aa5.2□□□□□ -1.58
ABCB1-210ENST00000543898 ROMO1P60602 79 aa5.2□□□□□ -1.58
ABCB1-210ENST00000543898 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.2□□□□□ -1.58
ABCB1-210ENST00000543898 PSORS1C2Q9UIG4 136 aa5.2□□□□□ -1.58
ABCB1-210ENST00000543898 IGLV5-52A0A0A0MRZ9 124 aa5.19□□□□□ -1.58
ABCB1-210ENST00000543898 DMBT1Q9UGM3 2413 aaPredicted RBP5.19□□□□□ -1.58
ABCB1-210ENST00000543898 PANO1I0J062 215 aa5.19□□□□□ -1.58
ABCB1-210ENST00000543898 A0A087X002 238 aa5.18□□□□□ -1.58
ABCB1-210ENST00000543898 NOTCH2NLQ7Z3S9 236 aa5.18□□□□□ -1.58
ABCB1-210ENST00000543898 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
ABCB1-210ENST00000543898 AKAP9Q99996 3911 aa5.18□□□□□ -1.58
ABCB1-210ENST00000543898 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
ABCB1-210ENST00000543898 RTL8CO15255 209 aa5.18□□□□□ -1.58
ABCB1-210ENST00000543898 ZNF861PO60384 105 aa5.17□□□□□ -1.58
ABCB1-210ENST00000543898 SPACA4Q8TDM5 124 aa5.16□□□□□ -1.58
ABCB1-210ENST00000543898 NUPR2A6NF83 97 aa5.16□□□□□ -1.58
ABCB1-210ENST00000543898 Q6ZR54 194 aa5.16□□□□□ -1.58
ABCB1-210ENST00000543898 APLNQ9ULZ1 77 aa5.15□□□□□ -1.58
ABCB1-210ENST00000543898 FAM229AH3BQW9 127 aa5.15□□□□□ -1.59
ABCB1-210ENST00000543898 LY6G6CO95867 125 aa5.13□□□□□ -1.59
ABCB1-210ENST00000543898 Q5W150 140 aa5.13□□□□□ -1.59
ABCB1-210ENST00000543898 TENM2Q9NT68 2774 aa5.12□□□□□ -1.59
ABCB1-210ENST00000543898 A0A087WTM6 91 aa5.12□□□□□ -1.59
ABCB1-210ENST00000543898 WWC2-AS2Q96NR7 200 aa5.11□□□□□ -1.59
ABCB1-210ENST00000543898 Q96NJ1 140 aa5.11□□□□□ -1.59
ABCB1-210ENST00000543898 ANK3Q12955 4377 aaKnown RBP5.09□□□□□ -1.59
ABCB1-210ENST00000543898 ASB16-AS1Q495Z4 193 aa5.09□□□□□ -1.59
ABCB1-210ENST00000543898 IGLV7-43P04211 117 aa5.08□□□□□ -1.6
ABCB1-210ENST00000543898 Q8N1X5 172 aa5.07□□□□□ -1.6
ABCB1-210ENST00000543898 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
ABCB1-210ENST00000543898 COL7A1Q02388 2944 aa5.04□□□□□ -1.6
ABCB1-210ENST00000543898 KRTAP13-1Q8IUC0 172 aa5.04□□□□□ -1.6
ABCB1-210ENST00000543898 LINC00483Q53H64 154 aa5.04□□□□□ -1.6
ABCB1-210ENST00000543898 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
ABCB1-210ENST00000543898 DMAC1Q96GE9 116 aa5.02□□□□□ -1.61
ABCB1-210ENST00000543898 CSMD3Q7Z407 3707 aa5.02□□□□□ -1.61
ABCB1-210ENST00000543898 J3QL48 77 aa5□□□□□ -1.61
ABCB1-210ENST00000543898 C20orf166-AS1Q96NR2 134 aa5□□□□□ -1.61
ABCB1-210ENST00000543898 TYMSOSQ8TAI1 123 aa4.99□□□□□ -1.61
ABCB1-210ENST00000543898 PLAC8Q9NZF1 115 aa4.99□□□□□ -1.61
ABCB1-210ENST00000543898 TGP01266 2768 aa4.97□□□□□ -1.61
ABCB1-210ENST00000543898 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
ABCB1-210ENST00000543898 Q6ZRN7 208 aaPredicted RBP4.96□□□□□ -1.62
ABCB1-210ENST00000543898 C9orf92A6NGG3 77 aa4.95□□□□□ -1.62
ABCB1-210ENST00000543898 A8MUU9 505 aa4.94□□□□□ -1.62
ABCB1-210ENST00000543898 A0A1B0GU33 70 aa4.89□□□□□ -1.63
ABCB1-210ENST00000543898 FBN3Q75N90 2809 aa4.88□□□□□ -1.63
ABCB1-210ENST00000543898 LINC00304Q8N9R0 145 aa4.87□□□□□ -1.63
ABCB1-210ENST00000543898 KRTAP10-2P60368 255 aa4.86□□□□□ -1.63
ABCB1-210ENST00000543898 SMR3BP02814 79 aaPredicted RBP4.85□□□□□ -1.63
ABCB1-210ENST00000543898 KRTAP13-2Q52LG2 175 aa4.85□□□□□ -1.63
ABCB1-210ENST00000543898 KRTAP13-3Q3SY46 172 aa4.84□□□□□ -1.63
ABCB1-210ENST00000543898 A0A0D9SG42 100 aa4.84□□□□□ -1.63
ABCB1-210ENST00000543898 P0C880 135 aa4.83□□□□□ -1.64
ABCB1-210ENST00000543898 KRTAP10-1P60331 282 aa4.81□□□□□ -1.64
ABCB1-210ENST00000543898 DNAH10Q8IVF4 4471 aa4.77□□□□□ -1.65
ABCB1-210ENST00000543898 H1FX-AS1Q4G0G2 97 aa4.76□□□□□ -1.65
ABCB1-210ENST00000543898 Q6ZSA8 131 aa4.76□□□□□ -1.65
ABCB1-210ENST00000543898 MEGF8Q7Z7M0 2845 aa4.76□□□□□ -1.65
ABCB1-210ENST00000543898 H0YAA0 97 aa4.73□□□□□ -1.65
ABCB1-210ENST00000543898 HUWE1Q7Z6Z7 4374 aaKnown RBP4.71□□□□□ -1.66
ABCB1-210ENST00000543898 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
ABCB1-210ENST00000543898 KRTAP1-4P0C5Y4 121 aa4.68□□□□□ -1.66
ABCB1-210ENST00000543898 ANK2Q01484 3957 aa4.67□□□□□ -1.66
ABCB1-210ENST00000543898 RPL37P61927 97 aaKnown RBP4.67□□□□□ -1.66
ABCB1-210ENST00000543898 COX6B2Q6YFQ2 88 aa4.66□□□□□ -1.66
ABCB1-210ENST00000543898 C10orf95Q9H7T3 257 aa4.64□□□□□ -1.67
ABCB1-210ENST00000543898 LYSTQ99698 3801 aa4.59□□□□□ -1.68
ABCB1-210ENST00000543898 DNAH9Q9NYC9 4486 aa4.58□□□□□ -1.68
ABCB1-210ENST00000543898 S4R3F8 94 aa4.57□□□□□ -1.68
ABCB1-210ENST00000543898 PLECQ15149 4684 aaKnown RBP4.55□□□□□ -1.68
ABCB1-210ENST00000543898 KRTAP3-1Q9BYR8 98 aa4.54□□□□□ -1.68
ABCB1-210ENST00000543898 RPS29P62273 56 aaKnown RBP4.53□□□□□ -1.68
ABCB1-210ENST00000543898 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
ABCB1-210ENST00000543898 DNAH8Q96JB1 4490 aa4.51□□□□□ -1.69
ABCB1-210ENST00000543898 FRAS1Q86XX4 4008 aa4.48□□□□□ -1.69
ABCB1-210ENST00000543898 ALMS1Q8TCU4 4167 aa4.44□□□□□ -1.7
ABCB1-210ENST00000543898 DNAH11Q96DT5 4516 aa4.44□□□□□ -1.7
ABCB1-210ENST00000543898 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
ABCB1-210ENST00000543898 DNAH7Q8WXX0 4024 aa4.43□□□□□ -1.7
ABCB1-210ENST00000543898 TPRXLQ17RH7 258 aa4.43□□□□□ -1.7
ABCB1-210ENST00000543898 CMYA5Q8N3K9 4069 aa4.41□□□□□ -1.7
ABCB1-210ENST00000543898 STARD9Q9P2P6 4700 aa4.41□□□□□ -1.7
ABCB1-210ENST00000543898 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.7
ABCB1-210ENST00000543898 DNAH17Q9UFH2 4485 aa4.4□□□□□ -1.7
ABCB1-210ENST00000543898 PLAC4Q8WY50 150 aa4.4□□□□□ -1.7
ABCB1-210ENST00000543898 KMT2AQ03164 3969 aa4.4□□□□□ -1.71
ABCB1-210ENST00000543898 M0QZ58 72 aa4.39□□□□□ -1.71
ABCB1-210ENST00000543898 R4GN34 69 aa4.39□□□□□ -1.71
ABCB1-210ENST00000543898 DNHD1Q96M86 4753 aa4.38□□□□□ -1.71
ABCB1-210ENST00000543898 VPS13DQ5THJ4 4388 aa4.37□□□□□ -1.71
ABCB1-210ENST00000543898 KRTAP10-6P60371 365 aaPredicted RBP4.37□□□□□ -1.71
ABCB1-210ENST00000543898 DNAH3Q8TD57 4116 aa4.37□□□□□ -1.71
ABCB1-210ENST00000543898 Q5VSD8 79 aa4.36□□□□□ -1.71
ABCB1-210ENST00000543898 LRP1BQ9NZR2 4599 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms