RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 VWFP04275 2813 aa8.44□□□□□ -1.06
RPS6KC1-206ENST00000543354 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
RPS6KC1-206ENST00000543354 A8MU10 97 aa8.43□□□□□ -1.06
RPS6KC1-206ENST00000543354 LINC00304Q8N9R0 145 aa8.43□□□□□ -1.06
RPS6KC1-206ENST00000543354 TENM1Q9UKZ4 2725 aa8.42□□□□□ -1.06
RPS6KC1-206ENST00000543354 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
RPS6KC1-206ENST00000543354 PANO1I0J062 215 aa8.38□□□□□ -1.07
RPS6KC1-206ENST00000543354 ZCCHC13Q8WW36 166 aaKnown RBP8.36□□□□□ -1.07
RPS6KC1-206ENST00000543354 SPRR1BP22528 89 aa8.35□□□□□ -1.07
RPS6KC1-206ENST00000543354 CRIPTQ9P021 101 aa8.35□□□□□ -1.07
RPS6KC1-206ENST00000543354 KRTAP29-1A8MX34 341 aaPredicted RBP8.34□□□□□ -1.07
RPS6KC1-206ENST00000543354 LINC01554Q52M75 96 aa8.33□□□□□ -1.08
RPS6KC1-206ENST00000543354 Q5W150 140 aa8.32□□□□□ -1.08
RPS6KC1-206ENST00000543354 WWC2-AS2Q96NR7 200 aa8.32□□□□□ -1.08
RPS6KC1-206ENST00000543354 A0A087X002 238 aa8.32□□□□□ -1.08
RPS6KC1-206ENST00000543354 NOTCH2NLQ7Z3S9 236 aa8.32□□□□□ -1.08
RPS6KC1-206ENST00000543354 KRTAP11-1Q8IUC1 163 aa8.31□□□□□ -1.08
RPS6KC1-206ENST00000543354 CSAG1Q6PB30 78 aa8.3□□□□□ -1.08
RPS6KC1-206ENST00000543354 KRTAP7-1Q8IUC3 87 aa8.29□□□□□ -1.08
RPS6KC1-206ENST00000543354 A0A1B0GU33 70 aa8.27□□□□□ -1.09
RPS6KC1-206ENST00000543354 SRRM2Q9UQ35 2752 aaKnown RBP8.26□□□□□ -1.09
RPS6KC1-206ENST00000543354 NBPF19A0A087WUL8 3843 aa8.26□□□□□ -1.09
RPS6KC1-206ENST00000543354 AKAP9Q99996 3911 aa8.24□□□□□ -1.09
RPS6KC1-206ENST00000543354 TENM2Q9NT68 2774 aa8.23□□□□□ -1.09
RPS6KC1-206ENST00000543354 TGP01266 2768 aa8.23□□□□□ -1.09
RPS6KC1-206ENST00000543354 H3BS24 57 aa8.22□□□□□ -1.09
RPS6KC1-206ENST00000543354 PLAC8Q9NZF1 115 aa8.21□□□□□ -1.09
RPS6KC1-206ENST00000543354 Q6ZR54 194 aa8.16□□□□□ -1.1
RPS6KC1-206ENST00000543354 ZNF469Q96JG9 3925 aaPredicted RBP8.16□□□□□ -1.1
RPS6KC1-206ENST00000543354 LCE6AA0A183 80 aa8.14□□□□□ -1.11
RPS6KC1-206ENST00000543354 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
RPS6KC1-206ENST00000543354 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
RPS6KC1-206ENST00000543354 OTOGQ6ZRI0 2925 aa8.1□□□□□ -1.11
RPS6KC1-206ENST00000543354 KRTAP10-2P60368 255 aa8.1□□□□□ -1.11
RPS6KC1-206ENST00000543354 TRRAPQ9Y4A5 3859 aa8.06□□□□□ -1.12
RPS6KC1-206ENST00000543354 A6NN06 94 aa8.06□□□□□ -1.12
RPS6KC1-206ENST00000543354 LINC00483Q53H64 154 aa8.05□□□□□ -1.12
RPS6KC1-206ENST00000543354 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
RPS6KC1-206ENST00000543354 KRTAP10-1P60331 282 aa8.03□□□□□ -1.12
RPS6KC1-206ENST00000543354 COX6B2Q6YFQ2 88 aa8□□□□□ -1.13
RPS6KC1-206ENST00000543354 Q6ZRN7 208 aaPredicted RBP7.92□□□□□ -1.14
RPS6KC1-206ENST00000543354 COL7A1Q02388 2944 aa7.91□□□□□ -1.14
RPS6KC1-206ENST00000543354 CSMD3Q7Z407 3707 aa7.91□□□□□ -1.14
RPS6KC1-206ENST00000543354 KRTAP13-1Q8IUC0 172 aa7.9□□□□□ -1.14
RPS6KC1-206ENST00000543354 FBN3Q75N90 2809 aa7.89□□□□□ -1.15
RPS6KC1-206ENST00000543354 RPL37P61927 97 aaKnown RBP7.89□□□□□ -1.15
RPS6KC1-206ENST00000543354 J3QL48 77 aa7.88□□□□□ -1.15
RPS6KC1-206ENST00000543354 H1FX-AS1Q4G0G2 97 aa7.88□□□□□ -1.15
RPS6KC1-206ENST00000543354 Q6ZSA8 131 aa7.88□□□□□ -1.15
RPS6KC1-206ENST00000543354 KRTAP13-2Q52LG2 175 aa7.84□□□□□ -1.15
RPS6KC1-206ENST00000543354 S4R3F8 94 aa7.83□□□□□ -1.16
RPS6KC1-206ENST00000543354 CAMK2N1Q7Z7J9 78 aa7.83□□□□□ -1.16
RPS6KC1-206ENST00000543354 LUZP6Q538Z0 58 aa7.83□□□□□ -1.16
RPS6KC1-206ENST00000543354 ROMO1P60602 79 aa7.82□□□□□ -1.16
RPS6KC1-206ENST00000543354 ANK3Q12955 4377 aaKnown RBP7.8□□□□□ -1.16
RPS6KC1-206ENST00000543354 R4GN34 69 aa7.76□□□□□ -1.17
RPS6KC1-206ENST00000543354 ASB16-AS1Q495Z4 193 aa7.73□□□□□ -1.17
RPS6KC1-206ENST00000543354 KRTAP25-1Q3LHN0 102 aa7.72□□□□□ -1.17
RPS6KC1-206ENST00000543354 MEGF8Q7Z7M0 2845 aa7.69□□□□□ -1.18
RPS6KC1-206ENST00000543354 M0QZ58 72 aa7.66□□□□□ -1.18
RPS6KC1-206ENST00000543354 Q5VSD8 79 aa7.62□□□□□ -1.19
RPS6KC1-206ENST00000543354 NDUFAF8A1L188 74 aa7.6□□□□□ -1.19
RPS6KC1-206ENST00000543354 A8MUU9 505 aa7.56□□□□□ -1.2
RPS6KC1-206ENST00000543354 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
RPS6KC1-206ENST00000543354 H0YAA0 97 aa7.5□□□□□ -1.21
RPS6KC1-206ENST00000543354 M0R2T5 61 aa7.5□□□□□ -1.21
RPS6KC1-206ENST00000543354 KRTAP1-4P0C5Y4 121 aa7.47□□□□□ -1.21
RPS6KC1-206ENST00000543354 A0A0A0MQY5 61 aa7.46□□□□□ -1.21
RPS6KC1-206ENST00000543354 DNAH10Q8IVF4 4471 aa7.45□□□□□ -1.22
RPS6KC1-206ENST00000543354 KRTAP16-1A8MUX0 517 aa7.42□□□□□ -1.22
RPS6KC1-206ENST00000543354 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.22
RPS6KC1-206ENST00000543354 SEC61BP60468 96 aaKnown RBP7.39□□□□□ -1.23
RPS6KC1-206ENST00000543354 C20orf166-AS1Q96NR2 134 aa7.38□□□□□ -1.23
RPS6KC1-206ENST00000543354 KRTAP13-3Q3SY46 172 aa7.37□□□□□ -1.23
RPS6KC1-206ENST00000543354 ANK2Q01484 3957 aa7.31□□□□□ -1.24
RPS6KC1-206ENST00000543354 P0C880 135 aa7.26□□□□□ -1.25
RPS6KC1-206ENST00000543354 LYSTQ99698 3801 aa7.25□□□□□ -1.25
RPS6KC1-206ENST00000543354 HUWE1Q7Z6Z7 4374 aaKnown RBP7.2□□□□□ -1.26
RPS6KC1-206ENST00000543354 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
RPS6KC1-206ENST00000543354 XP32Q5T750 250 aa7.18□□□□□ -1.26
RPS6KC1-206ENST00000543354 DNAH9Q9NYC9 4486 aa7.12□□□□□ -1.27
RPS6KC1-206ENST00000543354 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
RPS6KC1-206ENST00000543354 CMYA5Q8N3K9 4069 aa7.05□□□□□ -1.28
RPS6KC1-206ENST00000543354 FRAS1Q86XX4 4008 aa7.04□□□□□ -1.28
RPS6KC1-206ENST00000543354 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
RPS6KC1-206ENST00000543354 PLECQ15149 4684 aaKnown RBP7.02□□□□□ -1.29
RPS6KC1-206ENST00000543354 TNP1P09430 55 aa7□□□□□ -1.29
RPS6KC1-206ENST00000543354 DNAH8Q96JB1 4490 aa6.99□□□□□ -1.29
RPS6KC1-206ENST00000543354 A0A1B0GVY2 172 aa6.99□□□□□ -1.29
RPS6KC1-206ENST00000543354 DNAH3Q8TD57 4116 aa6.98□□□□□ -1.29
RPS6KC1-206ENST00000543354 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
RPS6KC1-206ENST00000543354 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
RPS6KC1-206ENST00000543354 DNAH1Q9P2D7 4330 aa6.97□□□□□ -1.29
RPS6KC1-206ENST00000543354 DNAH7Q8WXX0 4024 aa6.93□□□□□ -1.3
RPS6KC1-206ENST00000543354 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.31
RPS6KC1-206ENST00000543354 ALMS1Q8TCU4 4167 aa6.89□□□□□ -1.31
RPS6KC1-206ENST00000543354 DNAH17Q9UFH2 4485 aa6.87□□□□□ -1.31
RPS6KC1-206ENST00000543354 DNAH11Q96DT5 4516 aa6.85□□□□□ -1.31
RPS6KC1-206ENST00000543354 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
RPS6KC1-206ENST00000543354 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms