RNA–Protein interactions for RNA: ENST00000541871.1

CACNA1C-IT2-201, CACNA1C intronic transcript 2, humanhuman

TSL 2 BASIC

Gene CACNA1C-IT2, Length 589 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT2-201ENST00000541871 Q9Y3F1 56 aa1.47□□□□□ -2.17
CACNA1C-IT2-201ENST00000541871 CEP350Q5VT06 3117 aa1.47□□□□□ -2.17
CACNA1C-IT2-201ENST00000541871 DNAH11Q96DT5 4516 aa1.46□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 USP24Q9UPU5 2620 aa1.46□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 USP9YO00507 2555 aaPredicted RBP1.46□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 EPG5Q9HCE0 2579 aa1.46□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 NBPF19A0A087WUL8 3843 aa1.46□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 RANBP2P49792 3224 aaKnown RBP1.46□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 NCOR2Q9Y618 2525 aa1.45□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 TNP1P09430 55 aa1.45□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 FRYLO94915 3013 aa1.45□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 ITPR1Q14643 2758 aa1.44□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 AKAP9Q99996 3911 aa1.44□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 DEFB135Q30KP9 77 aa1.44□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 MAP1AP78559 2803 aaPredicted RBP1.44□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 LRRK2Q5S007 2527 aa1.44□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 PIEZO1Q92508 2521 aa1.44□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 FRYQ5TBA9 3013 aa1.44□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 RIF1Q5UIP0 2472 aaKnown RBP1.44□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 FAM186AA6NE01 2351 aa1.43□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 PTPN13Q12923 2485 aa1.43□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 SPART-AS1P0CW21 52 aa1.43□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 ITPR3Q14573 2671 aa1.43□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 PRUNE2Q8WUY3 3088 aa1.43□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 CFAP54Q96N23 3096 aa1.42□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 CSMD3Q7Z407 3707 aa1.41□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 HELZ2Q9BYK8 2649 aaKnown RBP1.41□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 FLNCQ14315 2725 aa1.41□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 APCP25054 2843 aa1.41□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 ZFHX4Q86UP3 3567 aa1.41□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 PDZD2O15018 2839 aa1.4□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 NF1P21359 2839 aa1.4□□□□□ -2.18
CACNA1C-IT2-201ENST00000541871 A0A096LPF7 62 aa1.4□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 LRBAP50851 2863 aa1.4□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 DCHS2Q6V1P9 2916 aa1.39□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 H3BNG1 76 aa1.39□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 LINC01556Q5JQF7 62 aa1.39□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 CHD8Q9HCK8 2581 aa1.39□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 TENM4Q6N022 2769 aa1.38□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 ANKHD1Q8IWZ3 2542 aaKnown RBP1.38□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 HIVEP3Q5T1R4 2406 aa1.38□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 SPG11Q96JI7 2443 aa1.38□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 TRIOO75962 3097 aa1.38□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 HTTP42858 3142 aa1.37□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 LYSTQ99698 3801 aa1.37□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 GCN1Q92616 2671 aaKnown RBP1.37□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 VPS13BQ7Z7G8 4022 aa1.37□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 C9orf92A6NGG3 77 aa1.37□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 M0R2T5 61 aa1.37□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 KRTAP12-3P60328 96 aa1.37□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 UTP20O75691 2785 aaKnown RBP1.37□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 CACNA1AO00555 2505 aa1.37□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 SONP18583 2426 aaKnown RBP1.37□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 C5orf42Q9H799 3197 aa1.37□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 CD52P31358 61 aa1.36□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 KRTAP10-4P60372 401 aaPredicted RBP1.36□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 KRTAP21-3Q3LHN1 58 aa1.36□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 COL12A1Q99715 3063 aa1.36□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 SETXQ7Z333 2677 aaKnown RBP1.35□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 BOD1L1Q8NFC6 3051 aa1.35□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 ATMQ13315 3056 aa1.35□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 SACSQ9NZJ4 4579 aa1.35□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 PRKDCP78527 4128 aaKnown RBP1.34□□□□□ -2.19
CACNA1C-IT2-201ENST00000541871 BSNQ9UPA5 3926 aa1.34□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 COL7A1Q02388 2944 aa1.33□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 RELNP78509 3460 aa1.33□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 CFAP46Q8IYW2 2715 aa1.33□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 MYCBP2O75592 4640 aa1.33□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 ANK2Q01484 3957 aa1.33□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 KMT2AQ03164 3969 aa1.33□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 DNAH3Q8TD57 4116 aa1.33□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 MTORP42345 2549 aa1.32□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 NIPBLQ6KC79 2804 aaeCLIP1.32□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 ZZEF1O43149 2961 aa1.31□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 KRTAP2-4Q9BYR9 128 aa1.31□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 KRTAP2-1Q9BYU5 128 aa1.31□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 ZNF469Q96JG9 3925 aaPredicted RBP1.31□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 SRCAPQ6ZRS2 3230 aa1.31□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 DNAH7Q8WXX0 4024 aa1.31□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 DNAH8Q96JB1 4490 aa1.31□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 DNAH12Q6ZR08 3092 aa1.31□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 SPENQ96T58 3664 aaKnown RBP1.3□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 ACANP16112 2415 aa1.3□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 VPS13AQ96RL7 3174 aa1.3□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 DMXL2Q8TDJ6 3036 aa1.29□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 DMXL1Q9Y485 3027 aa1.29□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 MKI67P46013 3256 aaKnown RBP1.29□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 SZT2Q5T011 3432 aa1.29□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 DYNC2H1Q8NCM8 4307 aaKnown RBP1.29□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 RPS29P62273 56 aaKnown RBP1.29□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 DEFB133Q30KQ1 61 aa1.29□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 DMDP11532 3685 aa1.28□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 CRCT1Q9UGL9 99 aa1.28□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 USP9XQ93008 2570 aaPredicted RBP1.28□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 ANKRD11Q6UB99 2663 aaPredicted RBP1.28□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 CENPEQ02224 2701 aa1.28□□□□□ -2.2
CACNA1C-IT2-201ENST00000541871 FBN2P35556 2912 aa1.27□□□□□ -2.21
CACNA1C-IT2-201ENST00000541871 TACC2O95359 2948 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms