RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 SPTBN2O15020 2390 aa1.98□□□□□ -2.09
YBX3-210ENST00000540975 CREBBPQ92793 2442 aa1.97□□□□□ -2.09
YBX3-210ENST00000540975 WNK1Q9H4A3 2382 aa1.97□□□□□ -2.09
YBX3-210ENST00000540975 PCOTHQ58A44 107 aa1.97□□□□□ -2.09
YBX3-210ENST00000540975 Q6ZRX8 168 aa1.97□□□□□ -2.09
YBX3-210ENST00000540975 TP53AIP1Q9HCN2 124 aa1.97□□□□□ -2.09
YBX3-210ENST00000540975 WDFY4Q6ZS81 3184 aa1.97□□□□□ -2.09
YBX3-210ENST00000540975 ANKRD11Q6UB99 2663 aaPredicted RBP1.96□□□□□ -2.1
YBX3-210ENST00000540975 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.96□□□□□ -2.1
YBX3-210ENST00000540975 CHD6Q8TD26 2715 aa1.96□□□□□ -2.1
YBX3-210ENST00000540975 PTPN13Q12923 2485 aa1.96□□□□□ -2.1
YBX3-210ENST00000540975 DSPP15924 2871 aaKnown RBP1.95□□□□□ -2.1
YBX3-210ENST00000540975 ABCA2Q9BZC7 2435 aa1.95□□□□□ -2.1
YBX3-210ENST00000540975 LINC01556Q5JQF7 62 aa1.95□□□□□ -2.1
YBX3-210ENST00000540975 PLAC4Q8WY50 150 aa1.95□□□□□ -2.1
YBX3-210ENST00000540975 MUC3AQ02505 3323 aa1.95□□□□□ -2.1
YBX3-210ENST00000540975 PRRC2CQ9Y520 2896 aaKnown RBP1.95□□□□□ -2.1
YBX3-210ENST00000540975 ZNF292O60281 2723 aa1.95□□□□□ -2.1
YBX3-210ENST00000540975 PIEZO2Q9H5I5 2752 aa1.94□□□□□ -2.1
YBX3-210ENST00000540975 DCHS1Q96JQ0 3298 aa1.94□□□□□ -2.1
YBX3-210ENST00000540975 DOPEY1Q5JWR5 2465 aa1.94□□□□□ -2.1
YBX3-210ENST00000540975 HIVEP3Q5T1R4 2406 aa1.94□□□□□ -2.1
YBX3-210ENST00000540975 A0A096LPF7 62 aa1.94□□□□□ -2.1
YBX3-210ENST00000540975 CRIPTQ9P021 101 aa1.94□□□□□ -2.1
YBX3-210ENST00000540975 SPENQ96T58 3664 aaKnown RBP1.94□□□□□ -2.1
YBX3-210ENST00000540975 AKAP6Q13023 2319 aa1.94□□□□□ -2.1
YBX3-210ENST00000540975 HELZ2Q9BYK8 2649 aaKnown RBP1.93□□□□□ -2.1
YBX3-210ENST00000540975 TENM1Q9UKZ4 2725 aa1.93□□□□□ -2.1
YBX3-210ENST00000540975 SPTAN1Q13813 2472 aaKnown RBP1.93□□□□□ -2.1
YBX3-210ENST00000540975 DEFB135Q30KP9 77 aa1.93□□□□□ -2.1
YBX3-210ENST00000540975 DEFB105AQ8NG35 78 aa1.93□□□□□ -2.1
YBX3-210ENST00000540975 PCLOQ9Y6V0 5065 aa1.93□□□□□ -2.1
YBX3-210ENST00000540975 KALRNO60229 2985 aa1.93□□□□□ -2.1
YBX3-210ENST00000540975 SETD2Q9BYW2 2564 aaPredicted RBP1.93□□□□□ -2.1
YBX3-210ENST00000540975 BOD1L1Q8NFC6 3051 aa1.92□□□□□ -2.1
YBX3-210ENST00000540975 SPRR1BP22528 89 aa1.91□□□□□ -2.1
YBX3-210ENST00000540975 CSPG4Q6UVK1 2322 aa1.91□□□□□ -2.1
YBX3-210ENST00000540975 BSNQ9UPA5 3926 aa1.91□□□□□ -2.1
YBX3-210ENST00000540975 NAV2Q8IVL1 2488 aa1.91□□□□□ -2.1
YBX3-210ENST00000540975 SMG1Q96Q15 3661 aaKnown RBP1.9□□□□□ -2.1
YBX3-210ENST00000540975 AKAP9Q99996 3911 aa1.9□□□□□ -2.1
YBX3-210ENST00000540975 NBASA2RRP1 2371 aa1.9□□□□□ -2.11
YBX3-210ENST00000540975 H0YAA0 97 aa1.9□□□□□ -2.11
YBX3-210ENST00000540975 Q6ZRN7 208 aaPredicted RBP1.9□□□□□ -2.11
YBX3-210ENST00000540975 ASH1LQ9NR48 2969 aaKnown RBP1.9□□□□□ -2.11
YBX3-210ENST00000540975 AKAP13Q12802 2813 aa1.9□□□□□ -2.11
YBX3-210ENST00000540975 CSMD1Q96PZ7 3565 aa1.89□□□□□ -2.11
YBX3-210ENST00000540975 DMXL2Q8TDJ6 3036 aa1.89□□□□□ -2.11
YBX3-210ENST00000540975 MYO18BQ8IUG5 2567 aa1.89□□□□□ -2.11
YBX3-210ENST00000540975 HTN3P15516 51 aa1.89□□□□□ -2.11
YBX3-210ENST00000540975 FLNBO75369 2602 aaKnown RBP1.89□□□□□ -2.11
YBX3-210ENST00000540975 CEP295Q9C0D2 2601 aa1.89□□□□□ -2.11
YBX3-210ENST00000540975 ATMQ13315 3056 aa1.89□□□□□ -2.11
YBX3-210ENST00000540975 HRNRQ86YZ3 2850 aaPredicted RBP1.88□□□□□ -2.11
YBX3-210ENST00000540975 IGF2RP11717 2491 aa1.88□□□□□ -2.11
YBX3-210ENST00000540975 MRPL34Q9BQ48 92 aaKnown RBP1.88□□□□□ -2.11
YBX3-210ENST00000540975 SPG11Q96JI7 2443 aa1.88□□□□□ -2.11
YBX3-210ENST00000540975 EPG5Q9HCE0 2579 aa1.88□□□□□ -2.11
YBX3-210ENST00000540975 DMXL1Q9Y485 3027 aa1.88□□□□□ -2.11
YBX3-210ENST00000540975 ACACBO00763 2458 aa1.88□□□□□ -2.11
YBX3-210ENST00000540975 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
YBX3-210ENST00000540975 PIEZO1Q92508 2521 aa1.87□□□□□ -2.11
YBX3-210ENST00000540975 K7EIL1 84 aa1.87□□□□□ -2.11
YBX3-210ENST00000540975 DEFB4AO15263 64 aa1.87□□□□□ -2.11
YBX3-210ENST00000540975 ASPMQ8IZT6 3477 aa1.87□□□□□ -2.11
YBX3-210ENST00000540975 USP9YO00507 2555 aaPredicted RBP1.86□□□□□ -2.11
YBX3-210ENST00000540975 KRTAP21-3Q3LHN1 58 aa1.86□□□□□ -2.11
YBX3-210ENST00000540975 Q6ZSA8 131 aa1.86□□□□□ -2.11
YBX3-210ENST00000540975 C2CD3Q4AC94 2353 aa1.86□□□□□ -2.11
YBX3-210ENST00000540975 TACC2O95359 2948 aa1.86□□□□□ -2.11
YBX3-210ENST00000540975 OTOGQ6ZRI0 2925 aa1.85□□□□□ -2.11
YBX3-210ENST00000540975 COX6B2Q6YFQ2 88 aa1.85□□□□□ -2.11
YBX3-210ENST00000540975 LRBAP50851 2863 aa1.84□□□□□ -2.11
YBX3-210ENST00000540975 MYO9AB2RTY4 2548 aa1.84□□□□□ -2.11
YBX3-210ENST00000540975 DCHS2Q6V1P9 2916 aa1.84□□□□□ -2.11
YBX3-210ENST00000540975 FN1P02751 2386 aaKnown RBP1.83□□□□□ -2.12
YBX3-210ENST00000540975 RPL37P61927 97 aaKnown RBP1.83□□□□□ -2.12
YBX3-210ENST00000540975 UBE2DNLQ8IWF7 75 aa1.83□□□□□ -2.12
YBX3-210ENST00000540975 LAMA5O15230 3695 aa1.83□□□□□ -2.12
YBX3-210ENST00000540975 NCOR2Q9Y618 2525 aa1.83□□□□□ -2.12
YBX3-210ENST00000540975 RELNP78509 3460 aa1.83□□□□□ -2.12
YBX3-210ENST00000540975 NBPF19A0A087WUL8 3843 aa1.83□□□□□ -2.12
YBX3-210ENST00000540975 CELSR2Q9HCU4 2923 aa1.83□□□□□ -2.12
YBX3-210ENST00000540975 CELSR1Q9NYQ6 3014 aa1.83□□□□□ -2.12
YBX3-210ENST00000540975 MAP1AP78559 2803 aaPredicted RBP1.82□□□□□ -2.12
YBX3-210ENST00000540975 KIAA1109Q2LD37 5005 aa1.82□□□□□ -2.12
YBX3-210ENST00000540975 C10orf95Q9H7T3 257 aa1.82□□□□□ -2.12
YBX3-210ENST00000540975 TENM2Q9NT68 2774 aa1.82□□□□□ -2.12
YBX3-210ENST00000540975 DNAH1Q9P2D7 4330 aa1.82□□□□□ -2.12
YBX3-210ENST00000540975 HECTD1Q9ULT8 2610 aa1.82□□□□□ -2.12
YBX3-210ENST00000540975 COL12A1Q99715 3063 aa1.82□□□□□ -2.12
YBX3-210ENST00000540975 FAM208BQ5VWN6 2430 aa1.81□□□□□ -2.12
YBX3-210ENST00000540975 TLN2Q9Y4G6 2542 aa1.81□□□□□ -2.12
YBX3-210ENST00000540975 A0A096LNI7 61 aa1.81□□□□□ -2.12
YBX3-210ENST00000540975 PRLHP81277 87 aa1.81□□□□□ -2.12
YBX3-210ENST00000540975 H1FX-AS1Q4G0G2 97 aa1.81□□□□□ -2.12
YBX3-210ENST00000540975 MUC2Q02817 5179 aa1.81□□□□□ -2.12
YBX3-210ENST00000540975 ITPR3Q14573 2671 aa1.8□□□□□ -2.12
YBX3-210ENST00000540975 SMR3AQ99954 134 aa1.8□□□□□ -2.12
YBX3-210ENST00000540975 FASNP49327 2511 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms