RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 Q6ZR54 194 aa8.1□□□□□ -1.11
BNIP3-202ENST00000540159 A0A1B0GVX0 72 aa8.09□□□□□ -1.11
BNIP3-202ENST00000540159 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.11
BNIP3-202ENST00000540159 LINC00483Q53H64 154 aa8.09□□□□□ -1.12
BNIP3-202ENST00000540159 PLAC8Q9NZF1 115 aa8.09□□□□□ -1.12
BNIP3-202ENST00000540159 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.12
BNIP3-202ENST00000540159 ALMS1Q8TCU4 4167 aa8.08□□□□□ -1.12
BNIP3-202ENST00000540159 LRP1BQ9NZR2 4599 aa8.08□□□□□ -1.12
BNIP3-202ENST00000540159 IGLV7-43P04211 117 aa8.06□□□□□ -1.12
BNIP3-202ENST00000540159 COA5Q86WW8 74 aa8.06□□□□□ -1.12
BNIP3-202ENST00000540159 Q1T7F1 81 aa8.05□□□□□ -1.12
BNIP3-202ENST00000540159 PRR15LQ9BU68 103 aa8.05□□□□□ -1.12
BNIP3-202ENST00000540159 MRPL34Q9BQ48 92 aaKnown RBP8.04□□□□□ -1.12
BNIP3-202ENST00000540159 Q5W150 140 aa8.03□□□□□ -1.12
BNIP3-202ENST00000540159 SPAG11AQ6PDA7 123 aa8.03□□□□□ -1.12
BNIP3-202ENST00000540159 CHKB-CPT1BH3BT56 60 aa8.02□□□□□ -1.13
BNIP3-202ENST00000540159 Q8N9P0 234 aaPredicted RBP8.01□□□□□ -1.13
BNIP3-202ENST00000540159 H3BPC8 53 aa8□□□□□ -1.13
BNIP3-202ENST00000540159 SPANXA2-OT1Q8N9U9 137 aa8□□□□□ -1.13
BNIP3-202ENST00000540159 Q5VV11 94 aa7.99□□□□□ -1.13
BNIP3-202ENST00000540159 FAT2Q9NYQ8 4349 aa7.99□□□□□ -1.13
BNIP3-202ENST00000540159 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
BNIP3-202ENST00000540159 TP53AIP1Q9HCN2 124 aa7.97□□□□□ -1.13
BNIP3-202ENST00000540159 VPS13BQ7Z7G8 4022 aa7.97□□□□□ -1.13
BNIP3-202ENST00000540159 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
BNIP3-202ENST00000540159 C1orf195Q5TG92 126 aa7.96□□□□□ -1.14
BNIP3-202ENST00000540159 KRTAP10-1P60331 282 aa7.96□□□□□ -1.14
BNIP3-202ENST00000540159 PKHD1P08F94 4074 aa7.96□□□□□ -1.14
BNIP3-202ENST00000540159 SPTSSBQ8NFR3 76 aa7.94□□□□□ -1.14
BNIP3-202ENST00000540159 V9GYY9 64 aa7.94□□□□□ -1.14
BNIP3-202ENST00000540159 PRR26Q8N8Z3 221 aa7.94□□□□□ -1.14
BNIP3-202ENST00000540159 HRES1P13985 223 aa7.93□□□□□ -1.14
BNIP3-202ENST00000540159 KRTAP13-2Q52LG2 175 aa7.92□□□□□ -1.14
BNIP3-202ENST00000540159 A6NED7 52 aa7.92□□□□□ -1.14
BNIP3-202ENST00000540159 PKD1P98161 4303 aa7.89□□□□□ -1.15
BNIP3-202ENST00000540159 LINC00313P59037 77 aa7.88□□□□□ -1.15
BNIP3-202ENST00000540159 LIMD2Q9BT23 127 aa7.87□□□□□ -1.15
BNIP3-202ENST00000540159 IGKV2D-30A0A075B6S6 120 aa7.84□□□□□ -1.15
BNIP3-202ENST00000540159 IGKV2-30P06310 120 aa7.84□□□□□ -1.15
BNIP3-202ENST00000540159 PMAIP1Q13794 54 aa7.84□□□□□ -1.15
BNIP3-202ENST00000540159 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
BNIP3-202ENST00000540159 SMR3BP02814 79 aaPredicted RBP7.83□□□□□ -1.16
BNIP3-202ENST00000540159 LCA10Q71F78 164 aa7.83□□□□□ -1.16
BNIP3-202ENST00000540159 LOC101927531A0A1B0GV80 90 aa7.82□□□□□ -1.16
BNIP3-202ENST00000540159 PLA2G1BP04054 148 aaKnown RBP7.82□□□□□ -1.16
BNIP3-202ENST00000540159 FAT1Q14517 4588 aa7.81□□□□□ -1.16
BNIP3-202ENST00000540159 SPINK7P58062 85 aa7.81□□□□□ -1.16
BNIP3-202ENST00000540159 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
BNIP3-202ENST00000540159 KRTAP1-4P0C5Y4 121 aa7.77□□□□□ -1.16
BNIP3-202ENST00000540159 C4orf48Q5BLP8 95 aa7.76□□□□□ -1.17
BNIP3-202ENST00000540159 TYMSOSQ8TAI1 123 aa7.76□□□□□ -1.17
BNIP3-202ENST00000540159 Q75L30 129 aa7.75□□□□□ -1.17
BNIP3-202ENST00000540159 Q6ZSA8 131 aa7.74□□□□□ -1.17
BNIP3-202ENST00000540159 C8orf87E5RJ46 101 aa7.74□□□□□ -1.17
BNIP3-202ENST00000540159 LINC01558Q9Y6Z2 57 aa7.73□□□□□ -1.17
BNIP3-202ENST00000540159 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
BNIP3-202ENST00000540159 SPINK1P00995 79 aa7.72□□□□□ -1.17
BNIP3-202ENST00000540159 ACYP2P14621 99 aa7.72□□□□□ -1.17
BNIP3-202ENST00000540159 SACSQ9NZJ4 4579 aa7.7□□□□□ -1.18
BNIP3-202ENST00000540159 C9orf92A6NGG3 77 aa7.68□□□□□ -1.18
BNIP3-202ENST00000540159 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
BNIP3-202ENST00000540159 Q8N1X5 172 aa7.67□□□□□ -1.18
BNIP3-202ENST00000540159 DYNC1H1Q14204 4646 aaKnown RBP7.67□□□□□ -1.18
BNIP3-202ENST00000540159 C7orf65Q6ZTY9 151 aa7.65□□□□□ -1.18
BNIP3-202ENST00000540159 DMAC1Q96GE9 116 aa7.65□□□□□ -1.19
BNIP3-202ENST00000540159 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
BNIP3-202ENST00000540159 A0A1B0GU69 56 aa7.61□□□□□ -1.19
BNIP3-202ENST00000540159 LINC00304Q8N9R0 145 aa7.6□□□□□ -1.19
BNIP3-202ENST00000540159 FLG2Q5D862 2391 aaPredicted RBP7.6□□□□□ -1.19
BNIP3-202ENST00000540159 ATP11AUNQ6ZP68 121 aa7.6□□□□□ -1.19
BNIP3-202ENST00000540159 DMBT1Q9UGM3 2413 aaPredicted RBP7.59□□□□□ -1.19
BNIP3-202ENST00000540159 KMT2CQ8NEZ4 4911 aaKnown RBP7.58□□□□□ -1.2
BNIP3-202ENST00000540159 A6NN06 94 aa7.54□□□□□ -1.2
BNIP3-202ENST00000540159 LRP1Q07954 4544 aaKnown RBP7.54□□□□□ -1.2
BNIP3-202ENST00000540159 MYCBP2O75592 4640 aa7.52□□□□□ -1.21
BNIP3-202ENST00000540159 KTN1-AS1Q86SY8 53 aa7.51□□□□□ -1.21
BNIP3-202ENST00000540159 APOBP04114 4563 aaKnown RBP7.51□□□□□ -1.21
BNIP3-202ENST00000540159 PRAC1Q96KF2 57 aa7.48□□□□□ -1.21
BNIP3-202ENST00000540159 ADM2Q7Z4H4 148 aa7.48□□□□□ -1.21
BNIP3-202ENST00000540159 MIR22HGQ0VDD5 57 aa7.43□□□□□ -1.22
BNIP3-202ENST00000540159 RBM12B-AS1Q9P1G2 102 aa7.42□□□□□ -1.22
BNIP3-202ENST00000540159 UQCR11O14957 56 aa7.4□□□□□ -1.23
BNIP3-202ENST00000540159 PKHD1L1Q86WI1 4243 aa7.39□□□□□ -1.23
BNIP3-202ENST00000540159 H3BS24 57 aa7.39□□□□□ -1.23
BNIP3-202ENST00000540159 RYR2Q92736 4967 aa7.38□□□□□ -1.23
BNIP3-202ENST00000540159 KRTAP10-4P60372 401 aaPredicted RBP7.34□□□□□ -1.23
BNIP3-202ENST00000540159 A0A1B0GVY2 172 aa7.34□□□□□ -1.23
BNIP3-202ENST00000540159 HSPG2P98160 4391 aa7.34□□□□□ -1.24
BNIP3-202ENST00000540159 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
BNIP3-202ENST00000540159 SPATA8Q6RVD6 105 aa7.33□□□□□ -1.24
BNIP3-202ENST00000540159 FAT3Q8TDW7 4589 aa7.3□□□□□ -1.24
BNIP3-202ENST00000540159 A8MUU9 505 aa7.29□□□□□ -1.24
BNIP3-202ENST00000540159 C20orf166-AS1Q96NR2 134 aa7.29□□□□□ -1.24
BNIP3-202ENST00000540159 RPS29P62273 56 aaKnown RBP7.26□□□□□ -1.25
BNIP3-202ENST00000540159 RYR3Q15413 4870 aa7.25□□□□□ -1.25
BNIP3-202ENST00000540159 KIAA1109Q2LD37 5005 aa7.24□□□□□ -1.25
BNIP3-202ENST00000540159 H0YAA0 97 aa7.22□□□□□ -1.25
BNIP3-202ENST00000540159 TNXBP22105 4242 aa7.2□□□□□ -1.26
BNIP3-202ENST00000540159 LPAP08519 4548 aa7.2□□□□□ -1.26
BNIP3-202ENST00000540159 Q5VSD8 79 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms