RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 Q5XG85 94 aa6.16□□□□□ -1.42
LEMD3-202ENST00000539442 LIMD2Q9BT23 127 aa6.16□□□□□ -1.42
LEMD3-202ENST00000539442 UBL5Q9BZL1 73 aa6.16□□□□□ -1.42
LEMD3-202ENST00000539442 FLG2Q5D862 2391 aaPredicted RBP6.15□□□□□ -1.42
LEMD3-202ENST00000539442 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.42
LEMD3-202ENST00000539442 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
LEMD3-202ENST00000539442 NREPQ16612 68 aa6.14□□□□□ -1.43
LEMD3-202ENST00000539442 ASB16-AS1Q495Z4 193 aa6.14□□□□□ -1.43
LEMD3-202ENST00000539442 LRP1Q07954 4544 aaKnown RBP6.14□□□□□ -1.43
LEMD3-202ENST00000539442 Q6ZVQ6 151 aa6.13□□□□□ -1.43
LEMD3-202ENST00000539442 MYCBP2O75592 4640 aa6.11□□□□□ -1.43
LEMD3-202ENST00000539442 TNXBP22105 4242 aa6.1□□□□□ -1.43
LEMD3-202ENST00000539442 CDIP1Q9H305 208 aa6.1□□□□□ -1.43
LEMD3-202ENST00000539442 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
LEMD3-202ENST00000539442 LINC00643Q86TS7 51 aa6.09□□□□□ -1.43
LEMD3-202ENST00000539442 LINC00472Q9H8W2 130 aa6.09□□□□□ -1.43
LEMD3-202ENST00000539442 J3KT08 172 aa6.08□□□□□ -1.44
LEMD3-202ENST00000539442 BPY2O14599 106 aa6.07□□□□□ -1.44
LEMD3-202ENST00000539442 Q96NJ1 140 aa6.07□□□□□ -1.44
LEMD3-202ENST00000539442 SIGMAR1Q99720 223 aa6.07□□□□□ -1.44
LEMD3-202ENST00000539442 CXCL6P80162 114 aa6.06□□□□□ -1.44
LEMD3-202ENST00000539442 C1orf195Q5TG92 126 aa6.05□□□□□ -1.44
LEMD3-202ENST00000539442 IGKV4-1P06312 121 aa6.03□□□□□ -1.44
LEMD3-202ENST00000539442 DEFB116Q30KQ4 102 aa6.03□□□□□ -1.44
LEMD3-202ENST00000539442 PCLOQ9Y6V0 5065 aa6.02□□□□□ -1.45
LEMD3-202ENST00000539442 IGKV3D-7A0A0C4DH55 119 aa6.01□□□□□ -1.45
LEMD3-202ENST00000539442 A8MWP4 228 aa6.01□□□□□ -1.45
LEMD3-202ENST00000539442 NDUFB1O75438 58 aa6.01□□□□□ -1.45
LEMD3-202ENST00000539442 DSCR10P59022 87 aa6.01□□□□□ -1.45
LEMD3-202ENST00000539442 DMBT1Q9UGM3 2413 aaPredicted RBP6.01□□□□□ -1.45
LEMD3-202ENST00000539442 FP248Q71RG6 208 aaPredicted RBP5.99□□□□□ -1.45
LEMD3-202ENST00000539442 K7EQZ3 153 aa5.98□□□□□ -1.45
LEMD3-202ENST00000539442 MT-ATP8P03928 68 aa5.98□□□□□ -1.45
LEMD3-202ENST00000539442 PRR15Q8IV56 129 aa5.98□□□□□ -1.45
LEMD3-202ENST00000539442 RETNLBQ9BQ08 111 aa5.98□□□□□ -1.45
LEMD3-202ENST00000539442 IMUPQ9GZP8 106 aa5.98□□□□□ -1.45
LEMD3-202ENST00000539442 A0A1B0GVX0 72 aa5.97□□□□□ -1.45
LEMD3-202ENST00000539442 Q8N9L7 120 aa5.96□□□□□ -1.46
LEMD3-202ENST00000539442 C8orf87E5RJ46 101 aa5.95□□□□□ -1.46
LEMD3-202ENST00000539442 HIST1H4AP62805 103 aaKnown RBP5.95□□□□□ -1.46
LEMD3-202ENST00000539442 IGHV6-1A0A0B4J1U7 121 aa5.94□□□□□ -1.46
LEMD3-202ENST00000539442 C8orf17Q9NRJ1 99 aa5.92□□□□□ -1.46
LEMD3-202ENST00000539442 IGLV7-46A0A075B6I9 117 aa5.91□□□□□ -1.46
LEMD3-202ENST00000539442 MMP24-AS1A0A0U1RRL7 71 aa5.91□□□□□ -1.46
LEMD3-202ENST00000539442 HCG22E2RYF7 251 aa5.91□□□□□ -1.46
LEMD3-202ENST00000539442 A0A087WVE0 104 aa5.9□□□□□ -1.46
LEMD3-202ENST00000539442 LINC00313P59037 77 aa5.9□□□□□ -1.46
LEMD3-202ENST00000539442 PRR4Q16378 134 aa5.9□□□□□ -1.46
LEMD3-202ENST00000539442 hDV103S1A0JD37 113 aa5.88□□□□□ -1.47
LEMD3-202ENST00000539442 CASC2Q6XLA1 102 aa5.88□□□□□ -1.47
LEMD3-202ENST00000539442 NOTCH2NLQ7Z3S9 236 aa5.88□□□□□ -1.47
LEMD3-202ENST00000539442 TMEM254Q8TBM7 123 aa5.87□□□□□ -1.47
LEMD3-202ENST00000539442 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
LEMD3-202ENST00000539442 KRTAP13-3Q3SY46 172 aa5.86□□□□□ -1.47
LEMD3-202ENST00000539442 WFDC13Q8IUB5 93 aa5.86□□□□□ -1.47
LEMD3-202ENST00000539442 KRTAP16-1A8MUX0 517 aa5.85□□□□□ -1.47
LEMD3-202ENST00000539442 MRPL34Q9BQ48 92 aaKnown RBP5.85□□□□□ -1.47
LEMD3-202ENST00000539442 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
LEMD3-202ENST00000539442 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
LEMD3-202ENST00000539442 C9orf92A6NGG3 77 aa5.84□□□□□ -1.47
LEMD3-202ENST00000539442 Q8N9P0 234 aaPredicted RBP5.82□□□□□ -1.48
LEMD3-202ENST00000539442 SCGB1A1P11684 91 aa5.81□□□□□ -1.48
LEMD3-202ENST00000539442 C20orf166-AS1Q96NR2 134 aa5.8□□□□□ -1.48
LEMD3-202ENST00000539442 A8MUU9 505 aa5.79□□□□□ -1.48
LEMD3-202ENST00000539442 ATOX1O00244 68 aa5.79□□□□□ -1.48
LEMD3-202ENST00000539442 HERC1Q15751 4861 aa5.79□□□□□ -1.48
LEMD3-202ENST00000539442 NDUFS5O43920 106 aa5.78□□□□□ -1.48
LEMD3-202ENST00000539442 Q75L30 129 aa5.78□□□□□ -1.48
LEMD3-202ENST00000539442 SMIM20Q8N5G0 67 aa5.78□□□□□ -1.48
LEMD3-202ENST00000539442 TP53AIP1Q9HCN2 124 aa5.78□□□□□ -1.48
LEMD3-202ENST00000539442 HMCN2Q8NDA2 5059 aa5.76□□□□□ -1.49
LEMD3-202ENST00000539442 RPL37P61927 97 aaKnown RBP5.75□□□□□ -1.49
LEMD3-202ENST00000539442 OCR1Q9BZK8 76 aa5.75□□□□□ -1.49
LEMD3-202ENST00000539442 UQCRQO14949 82 aa5.74□□□□□ -1.49
LEMD3-202ENST00000539442 TRAV7A0A075B6U4 112 aa5.73□□□□□ -1.49
LEMD3-202ENST00000539442 ZCCHC13Q8WW36 166 aaKnown RBP5.71□□□□□ -1.5
LEMD3-202ENST00000539442 TRAV22A0A0B4J277 110 aa5.7□□□□□ -1.5
LEMD3-202ENST00000539442 ATP11AUNQ6ZP68 121 aa5.7□□□□□ -1.5
LEMD3-202ENST00000539442 SERP2Q8N6R1 65 aa5.7□□□□□ -1.5
LEMD3-202ENST00000539442 C5orf47Q569G3 176 aa5.69□□□□□ -1.5
LEMD3-202ENST00000539442 ANAPC13Q9BS18 74 aa5.69□□□□□ -1.5
LEMD3-202ENST00000539442 LPAP08519 4548 aa5.67□□□□□ -1.5
LEMD3-202ENST00000539442 Q5W150 140 aa5.67□□□□□ -1.5
LEMD3-202ENST00000539442 H0Y9P7 68 aa5.66□□□□□ -1.5
LEMD3-202ENST00000539442 MP68P56378 58 aa5.66□□□□□ -1.5
LEMD3-202ENST00000539442 SEC61BP60468 96 aaKnown RBP5.66□□□□□ -1.5
LEMD3-202ENST00000539442 H3BPC8 53 aa5.65□□□□□ -1.5
LEMD3-202ENST00000539442 COX7CP15954 63 aa5.65□□□□□ -1.5
LEMD3-202ENST00000539442 LRP2P98164 4655 aa5.64□□□□□ -1.51
LEMD3-202ENST00000539442 PCOTHQ58A44 107 aa5.63□□□□□ -1.51
LEMD3-202ENST00000539442 LOC101927531A0A1B0GV80 90 aa5.62□□□□□ -1.51
LEMD3-202ENST00000539442 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.61□□□□□ -1.51
LEMD3-202ENST00000539442 LINC00208Q96KT6 92 aa5.61□□□□□ -1.51
LEMD3-202ENST00000539442 IGKV2-30P06310 120 aa5.6□□□□□ -1.51
LEMD3-202ENST00000539442 C7orf65Q6ZTY9 151 aa5.6□□□□□ -1.51
LEMD3-202ENST00000539442 C1orf64Q8NEQ6 169 aa5.6□□□□□ -1.51
LEMD3-202ENST00000539442 A0A0U1RQV1 116 aa5.59□□□□□ -1.51
LEMD3-202ENST00000539442 C20orf197Q8N268 126 aa5.59□□□□□ -1.51
LEMD3-202ENST00000539442 MUC17Q685J3 4493 aa5.59□□□□□ -1.52
LEMD3-202ENST00000539442 IGKV2D-30A0A075B6S6 120 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms