RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 TLX1NBP0CAT3 122 aa6.6□□□□□ -1.35
DDX11-213ENST00000539049 MRPL34Q9BQ48 92 aaKnown RBP6.6□□□□□ -1.35
DDX11-213ENST00000539049 KRTAP7-1Q8IUC3 87 aa6.6□□□□□ -1.35
DDX11-213ENST00000539049 H3BNG1 76 aa6.59□□□□□ -1.35
DDX11-213ENST00000539049 K7EIL1 84 aa6.59□□□□□ -1.35
DDX11-213ENST00000539049 DMAC1Q96GE9 116 aa6.59□□□□□ -1.35
DDX11-213ENST00000539049 CDK2AP2O75956 126 aa6.58□□□□□ -1.36
DDX11-213ENST00000539049 IGLV5-52A0A0A0MRZ9 124 aa6.57□□□□□ -1.36
DDX11-213ENST00000539049 A8MUU9 505 aa6.56□□□□□ -1.36
DDX11-213ENST00000539049 KRTAP1-5Q9BYS1 174 aa6.56□□□□□ -1.36
DDX11-213ENST00000539049 A0A1B0GVX0 72 aa6.55□□□□□ -1.36
DDX11-213ENST00000539049 LINC00483Q53H64 154 aa6.54□□□□□ -1.36
DDX11-213ENST00000539049 FLG2Q5D862 2391 aaPredicted RBP6.52□□□□□ -1.37
DDX11-213ENST00000539049 FBN3Q75N90 2809 aa6.52□□□□□ -1.37
DDX11-213ENST00000539049 IGLV7-43P04211 117 aa6.52□□□□□ -1.37
DDX11-213ENST00000539049 KRTAP11-1Q8IUC1 163 aa6.52□□□□□ -1.37
DDX11-213ENST00000539049 Q5W150 140 aa6.51□□□□□ -1.37
DDX11-213ENST00000539049 Q96NJ1 140 aa6.51□□□□□ -1.37
DDX11-213ENST00000539049 ANK2Q01484 3957 aa6.5□□□□□ -1.37
DDX11-213ENST00000539049 ALMS1Q8TCU4 4167 aa6.5□□□□□ -1.37
DDX11-213ENST00000539049 DMBT1Q9UGM3 2413 aaPredicted RBP6.49□□□□□ -1.37
DDX11-213ENST00000539049 PANO1I0J062 215 aa6.49□□□□□ -1.37
DDX11-213ENST00000539049 SPRR1BP22528 89 aa6.48□□□□□ -1.37
DDX11-213ENST00000539049 CIRBP-AS1Q8TBR5 109 aa6.48□□□□□ -1.37
DDX11-213ENST00000539049 NOTCH2NLQ7Z3S9 236 aa6.48□□□□□ -1.37
DDX11-213ENST00000539049 KRTAP16-1A8MUX0 517 aa6.48□□□□□ -1.37
DDX11-213ENST00000539049 LINC00304Q8N9R0 145 aa6.48□□□□□ -1.37
DDX11-213ENST00000539049 CRIPTQ9P021 101 aa6.48□□□□□ -1.37
DDX11-213ENST00000539049 NDUFAF8A1L188 74 aa6.46□□□□□ -1.38
DDX11-213ENST00000539049 SPINT4Q6UDR6 99 aa6.45□□□□□ -1.38
DDX11-213ENST00000539049 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
DDX11-213ENST00000539049 LY6G6CO95867 125 aa6.43□□□□□ -1.38
DDX11-213ENST00000539049 KRTAP13-3Q3SY46 172 aa6.43□□□□□ -1.38
DDX11-213ENST00000539049 C20orf166-AS1Q96NR2 134 aa6.41□□□□□ -1.38
DDX11-213ENST00000539049 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.41□□□□□ -1.38
DDX11-213ENST00000539049 LYSTQ99698 3801 aa6.38□□□□□ -1.39
DDX11-213ENST00000539049 DNAH10Q8IVF4 4471 aa6.38□□□□□ -1.39
DDX11-213ENST00000539049 DNAH1Q9P2D7 4330 aa6.37□□□□□ -1.39
DDX11-213ENST00000539049 SPINK1P00995 79 aa6.36□□□□□ -1.39
DDX11-213ENST00000539049 H0YAA0 97 aa6.35□□□□□ -1.39
DDX11-213ENST00000539049 NBDYA0A0U1RRE5 68 aa6.35□□□□□ -1.39
DDX11-213ENST00000539049 NUPR2A6NF83 97 aa6.35□□□□□ -1.39
DDX11-213ENST00000539049 C14orf177Q52M58 125 aa6.34□□□□□ -1.39
DDX11-213ENST00000539049 CMYA5Q8N3K9 4069 aa6.33□□□□□ -1.4
DDX11-213ENST00000539049 FAM229AH3BQW9 127 aa6.33□□□□□ -1.4
DDX11-213ENST00000539049 PSORS1C2Q9UIG4 136 aa6.32□□□□□ -1.4
DDX11-213ENST00000539049 IGKV2-30P06310 120 aa6.31□□□□□ -1.4
DDX11-213ENST00000539049 K7ERS5 55 aa6.31□□□□□ -1.4
DDX11-213ENST00000539049 Q6ZSA8 131 aa6.31□□□□□ -1.4
DDX11-213ENST00000539049 MEGF8Q7Z7M0 2845 aa6.31□□□□□ -1.4
DDX11-213ENST00000539049 A0A087WTM6 91 aa6.3□□□□□ -1.4
DDX11-213ENST00000539049 APLNQ9ULZ1 77 aa6.3□□□□□ -1.4
DDX11-213ENST00000539049 IGKV2D-30A0A075B6S6 120 aa6.29□□□□□ -1.4
DDX11-213ENST00000539049 SPACA4Q8TDM5 124 aa6.29□□□□□ -1.4
DDX11-213ENST00000539049 DNAH3Q8TD57 4116 aa6.28□□□□□ -1.4
DDX11-213ENST00000539049 HUWE1Q7Z6Z7 4374 aaKnown RBP6.26□□□□□ -1.41
DDX11-213ENST00000539049 A0A1B0GU33 70 aa6.24□□□□□ -1.41
DDX11-213ENST00000539049 DNAH9Q9NYC9 4486 aa6.24□□□□□ -1.41
DDX11-213ENST00000539049 LUZP6Q538Z0 58 aa6.23□□□□□ -1.41
DDX11-213ENST00000539049 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
DDX11-213ENST00000539049 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
DDX11-213ENST00000539049 KRTAP13-1Q8IUC0 172 aa6.18□□□□□ -1.42
DDX11-213ENST00000539049 WWC2-AS2Q96NR7 200 aa6.17□□□□□ -1.42
DDX11-213ENST00000539049 H1FX-AS1Q4G0G2 97 aa6.16□□□□□ -1.42
DDX11-213ENST00000539049 TYMSOSQ8TAI1 123 aa6.16□□□□□ -1.42
DDX11-213ENST00000539049 DNHD1Q96M86 4753 aa6.16□□□□□ -1.42
DDX11-213ENST00000539049 Q8N1X5 172 aa6.16□□□□□ -1.42
DDX11-213ENST00000539049 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
DDX11-213ENST00000539049 DNAH7Q8WXX0 4024 aa6.13□□□□□ -1.43
DDX11-213ENST00000539049 KRTAP10-2P60368 255 aa6.12□□□□□ -1.43
DDX11-213ENST00000539049 C9orf92A6NGG3 77 aa6.11□□□□□ -1.43
DDX11-213ENST00000539049 KRTAP21-3Q3LHN1 58 aa6.11□□□□□ -1.43
DDX11-213ENST00000539049 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
DDX11-213ENST00000539049 PLECQ15149 4684 aaKnown RBP6.08□□□□□ -1.44
DDX11-213ENST00000539049 Q6ZRN7 208 aaPredicted RBP6.07□□□□□ -1.44
DDX11-213ENST00000539049 FRAS1Q86XX4 4008 aa6.03□□□□□ -1.44
DDX11-213ENST00000539049 DYNC2H1Q8NCM8 4307 aaKnown RBP6.01□□□□□ -1.45
DDX11-213ENST00000539049 DNAH8Q96JB1 4490 aa6□□□□□ -1.45
DDX11-213ENST00000539049 RPL37P61927 97 aaKnown RBP6□□□□□ -1.45
DDX11-213ENST00000539049 COX6B2Q6YFQ2 88 aa6□□□□□ -1.45
DDX11-213ENST00000539049 KRTAP10-1P60331 282 aa5.98□□□□□ -1.45
DDX11-213ENST00000539049 KMT2AQ03164 3969 aa5.97□□□□□ -1.45
DDX11-213ENST00000539049 HECTD4Q9Y4D8 3996 aa5.96□□□□□ -1.45
DDX11-213ENST00000539049 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
DDX11-213ENST00000539049 PRKDCP78527 4128 aaKnown RBP5.95□□□□□ -1.46
DDX11-213ENST00000539049 STARD9Q9P2P6 4700 aa5.95□□□□□ -1.46
DDX11-213ENST00000539049 A0A0D9SG42 100 aa5.93□□□□□ -1.46
DDX11-213ENST00000539049 VPS13DQ5THJ4 4388 aa5.93□□□□□ -1.46
DDX11-213ENST00000539049 KRTAP13-2Q52LG2 175 aa5.93□□□□□ -1.46
DDX11-213ENST00000539049 DNAH17Q9UFH2 4485 aa5.92□□□□□ -1.46
DDX11-213ENST00000539049 DNAH11Q96DT5 4516 aa5.91□□□□□ -1.46
DDX11-213ENST00000539049 DNAH2Q9P225 4427 aa5.89□□□□□ -1.47
DDX11-213ENST00000539049 DNAH6Q9C0G6 4158 aa5.81□□□□□ -1.48
DDX11-213ENST00000539049 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
DDX11-213ENST00000539049 LRP1BQ9NZR2 4599 aa5.77□□□□□ -1.49
DDX11-213ENST00000539049 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
DDX11-213ENST00000539049 S4R3F8 94 aa5.75□□□□□ -1.49
DDX11-213ENST00000539049 DNAH5Q8TE73 4624 aa5.74□□□□□ -1.49
DDX11-213ENST00000539049 FAT1Q14517 4588 aa5.73□□□□□ -1.49
DDX11-213ENST00000539049 KRTAP1-4P0C5Y4 121 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms