RNA–Protein interactions for RNA: ENST00000538171.5

TRAP1-202, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2 BASIC

Gene TRAP1, Length 2,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-202ENST00000538171 SSBP3-AS1Q7Z2R9 100 aa13.42□□□□□ -0.26
TRAP1-202ENST00000538171 FAT2Q9NYQ8 4349 aa13.42□□□□□ -0.26
TRAP1-202ENST00000538171 MRPL34Q9BQ48 92 aaKnown RBP13.41□□□□□ -0.26
TRAP1-202ENST00000538171 KRTAP10-1P60331 282 aa13.4□□□□□ -0.26
TRAP1-202ENST00000538171 A0A087X002 238 aa13.39□□□□□ -0.27
TRAP1-202ENST00000538171 NDUFS5O43920 106 aa13.39□□□□□ -0.27
TRAP1-202ENST00000538171 SPINK6Q6UWN8 80 aa13.39□□□□□ -0.27
TRAP1-202ENST00000538171 NOTCH2NLQ7Z3S9 236 aa13.39□□□□□ -0.27
TRAP1-202ENST00000538171 LINC00336Q6ZUF6 198 aa13.33□□□□□ -0.28
TRAP1-202ENST00000538171 LRP1BQ9NZR2 4599 aa13.33□□□□□ -0.28
TRAP1-202ENST00000538171 Q1T7F1 81 aa13.28□□□□□ -0.28
TRAP1-202ENST00000538171 KRTAP13-2Q52LG2 175 aa13.28□□□□□ -0.28
TRAP1-202ENST00000538171 IGLV7-46A0A075B6I9 117 aa13.27□□□□□ -0.29
TRAP1-202ENST00000538171 KRTAP21-3Q3LHN1 58 aa13.27□□□□□ -0.29
TRAP1-202ENST00000538171 PCOTHQ58A44 107 aa13.27□□□□□ -0.29
TRAP1-202ENST00000538171 C8orf87E5RJ46 101 aa13.22□□□□□ -0.29
TRAP1-202ENST00000538171 VPS13BQ7Z7G8 4022 aa13.2□□□□□ -0.3
TRAP1-202ENST00000538171 KRTAP1-4P0C5Y4 121 aa13.19□□□□□ -0.3
TRAP1-202ENST00000538171 PRO0628Q9UI54 55 aa13.16□□□□□ -0.3
TRAP1-202ENST00000538171 C1orf195Q5TG92 126 aa13.15□□□□□ -0.3
TRAP1-202ENST00000538171 Q5W150 140 aa13.15□□□□□ -0.3
TRAP1-202ENST00000538171 KRTAP13-3Q3SY46 172 aa13.14□□□□□ -0.31
TRAP1-202ENST00000538171 LOC101927531A0A1B0GV80 90 aa13.13□□□□□ -0.31
TRAP1-202ENST00000538171 LINC00313P59037 77 aa13.12□□□□□ -0.31
TRAP1-202ENST00000538171 COA5Q86WW8 74 aa13.12□□□□□ -0.31
TRAP1-202ENST00000538171 BRK1Q8WUW1 75 aa13.12□□□□□ -0.31
TRAP1-202ENST00000538171 V9GYY9 64 aa13.12□□□□□ -0.31
TRAP1-202ENST00000538171 PSPHP1O15172 72 aa13.09□□□□□ -0.31
TRAP1-202ENST00000538171 LIMD2Q9BT23 127 aa13.08□□□□□ -0.32
TRAP1-202ENST00000538171 SACSQ9NZJ4 4579 aa13.08□□□□□ -0.32
TRAP1-202ENST00000538171 Q8N9P0 234 aaPredicted RBP13.08□□□□□ -0.32
TRAP1-202ENST00000538171 PLA2G1BP04054 148 aaKnown RBP13.05□□□□□ -0.32
TRAP1-202ENST00000538171 PKHD1P08F94 4074 aa13.03□□□□□ -0.32
TRAP1-202ENST00000538171 A8MUN3 132 aa13.01□□□□□ -0.33
TRAP1-202ENST00000538171 TYMSOSQ8TAI1 123 aa13.01□□□□□ -0.33
TRAP1-202ENST00000538171 C4orf48Q5BLP8 95 aa12.99□□□□□ -0.33
TRAP1-202ENST00000538171 FAM229AH3BQW9 127 aa12.98□□□□□ -0.33
TRAP1-202ENST00000538171 KRTAP16-1A8MUX0 517 aa12.97□□□□□ -0.33
TRAP1-202ENST00000538171 HRES1P13985 223 aa12.97□□□□□ -0.33
TRAP1-202ENST00000538171 SPINK1P00995 79 aa12.95□□□□□ -0.34
TRAP1-202ENST00000538171 Q5VV11 94 aa12.93□□□□□ -0.34
TRAP1-202ENST00000538171 RETNLBQ9BQ08 111 aa12.92□□□□□ -0.34
TRAP1-202ENST00000538171 PRR15LQ9BU68 103 aa12.9□□□□□ -0.34
TRAP1-202ENST00000538171 DYNC1H1Q14204 4646 aaKnown RBP12.89□□□□□ -0.35
TRAP1-202ENST00000538171 IGKV2-30P06310 120 aa12.86□□□□□ -0.35
TRAP1-202ENST00000538171 PRR26Q8N8Z3 221 aa12.86□□□□□ -0.35
TRAP1-202ENST00000538171 SMR3BP02814 79 aaPredicted RBP12.83□□□□□ -0.36
TRAP1-202ENST00000538171 LINC00304Q8N9R0 145 aa12.83□□□□□ -0.36
TRAP1-202ENST00000538171 SPAG11AQ6PDA7 123 aa12.82□□□□□ -0.36
TRAP1-202ENST00000538171 A0A1B0GVY2 172 aa12.82□□□□□ -0.36
TRAP1-202ENST00000538171 RPS29P62273 56 aaKnown RBP12.81□□□□□ -0.36
TRAP1-202ENST00000538171 CHKB-CPT1BH3BT56 60 aa12.8□□□□□ -0.36
TRAP1-202ENST00000538171 ACYP2P14621 99 aa12.8□□□□□ -0.36
TRAP1-202ENST00000538171 LINC01558Q9Y6Z2 57 aa12.79□□□□□ -0.36
TRAP1-202ENST00000538171 DMAC1Q96GE9 116 aa12.78□□□□□ -0.36
TRAP1-202ENST00000538171 Q75L30 129 aa12.77□□□□□ -0.36
TRAP1-202ENST00000538171 APOBP04114 4563 aaKnown RBP12.77□□□□□ -0.37
TRAP1-202ENST00000538171 IGKV2D-30A0A075B6S6 120 aa12.69□□□□□ -0.38
TRAP1-202ENST00000538171 KRTAP10-4P60372 401 aaPredicted RBP12.69□□□□□ -0.38
TRAP1-202ENST00000538171 FAT1Q14517 4588 aa12.69□□□□□ -0.38
TRAP1-202ENST00000538171 PKHD1L1Q86WI1 4243 aa12.69□□□□□ -0.38
TRAP1-202ENST00000538171 RYR2Q92736 4967 aa12.67□□□□□ -0.38
TRAP1-202ENST00000538171 A8MU10 97 aa12.65□□□□□ -0.38
TRAP1-202ENST00000538171 A6NED7 52 aa12.64□□□□□ -0.39
TRAP1-202ENST00000538171 LCA10Q71F78 164 aa12.56□□□□□ -0.4
TRAP1-202ENST00000538171 C7orf65Q6ZTY9 151 aa12.53□□□□□ -0.4
TRAP1-202ENST00000538171 CDC42SE1Q9NRR8 79 aa12.5□□□□□ -0.41
TRAP1-202ENST00000538171 KMT2CQ8NEZ4 4911 aaKnown RBP12.5□□□□□ -0.41
TRAP1-202ENST00000538171 C9orf92A6NGG3 77 aa12.5□□□□□ -0.41
TRAP1-202ENST00000538171 SPINK7P58062 85 aa12.49□□□□□ -0.41
TRAP1-202ENST00000538171 C20orf166-AS1Q96NR2 134 aa12.46□□□□□ -0.41
TRAP1-202ENST00000538171 A8MUU9 505 aa12.46□□□□□ -0.42
TRAP1-202ENST00000538171 ATP11AUNQ6ZP68 121 aa12.42□□□□□ -0.42
TRAP1-202ENST00000538171 SPTSSBQ8NFR3 76 aa12.41□□□□□ -0.42
TRAP1-202ENST00000538171 PMAIP1Q13794 54 aa12.39□□□□□ -0.43
TRAP1-202ENST00000538171 A0A1B0GU69 56 aa12.39□□□□□ -0.43
TRAP1-202ENST00000538171 Q8N1X5 172 aa12.37□□□□□ -0.43
TRAP1-202ENST00000538171 FLG2Q5D862 2391 aaPredicted RBP12.29□□□□□ -0.44
TRAP1-202ENST00000538171 TNXBP22105 4242 aa12.28□□□□□ -0.44
TRAP1-202ENST00000538171 FAT3Q8TDW7 4589 aa12.25□□□□□ -0.45
TRAP1-202ENST00000538171 HSPG2P98160 4391 aa12.24□□□□□ -0.45
TRAP1-202ENST00000538171 Q5VSD8 79 aa12.22□□□□□ -0.45
TRAP1-202ENST00000538171 LRP1Q07954 4544 aaKnown RBP12.22□□□□□ -0.45
TRAP1-202ENST00000538171 KRTAP10-8P60410 259 aa12.21□□□□□ -0.45
TRAP1-202ENST00000538171 A6NN06 94 aa12.2□□□□□ -0.46
TRAP1-202ENST00000538171 KRTAP3-1Q9BYR8 98 aa12.15□□□□□ -0.46
TRAP1-202ENST00000538171 RYR3Q15413 4870 aa12.14□□□□□ -0.47
TRAP1-202ENST00000538171 UQCR11O14957 56 aa12.13□□□□□ -0.47
TRAP1-202ENST00000538171 SPATA8Q6RVD6 105 aa12.12□□□□□ -0.47
TRAP1-202ENST00000538171 RYR1P21817 5038 aa12.11□□□□□ -0.47
TRAP1-202ENST00000538171 KTN1-AS1Q86SY8 53 aa12.09□□□□□ -0.47
TRAP1-202ENST00000538171 MIR22HGQ0VDD5 57 aa12.08□□□□□ -0.48
TRAP1-202ENST00000538171 SEC61GP60059 68 aa12.05□□□□□ -0.48
TRAP1-202ENST00000538171 COX6B2Q6YFQ2 88 aa12.01□□□□□ -0.49
TRAP1-202ENST00000538171 KRTAP17-1Q9BYP8 105 aa11.99□□□□□ -0.49
TRAP1-202ENST00000538171 RPL37P61927 97 aaKnown RBP11.96□□□□□ -0.49
TRAP1-202ENST00000538171 XP32Q5T750 250 aa11.91□□□□□ -0.5
TRAP1-202ENST00000538171 DMBT1Q9UGM3 2413 aaPredicted RBP11.89□□□□□ -0.51
TRAP1-202ENST00000538171 KIAA1109Q2LD37 5005 aa11.87□□□□□ -0.51
TRAP1-202ENST00000538171 MT1HL1P0DM35 61 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms