RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 Q6ZQT0 140 aa1.94□□□□□ -2.1
USP48-215ENST00000534705 TMEM254Q8TBM7 123 aa1.94□□□□□ -2.1
USP48-215ENST00000534705 DIRC1Q969H9 104 aa1.94□□□□□ -2.1
USP48-215ENST00000534705 ABCA13Q86UQ4 5058 aa1.94□□□□□ -2.1
USP48-215ENST00000534705 NUPR2A6NF83 97 aa1.93□□□□□ -2.1
USP48-215ENST00000534705 A8MWP4 228 aa1.93□□□□□ -2.1
USP48-215ENST00000534705 PDE6GP18545 87 aa1.93□□□□□ -2.1
USP48-215ENST00000534705 Q5VV11 94 aa1.93□□□□□ -2.1
USP48-215ENST00000534705 ATP11AUNQ6ZP68 121 aa1.93□□□□□ -2.1
USP48-215ENST00000534705 SNURFQ9Y675 71 aa1.93□□□□□ -2.1
USP48-215ENST00000534705 VPS13BQ7Z7G8 4022 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 TRAV12-3A0A0B4J271 114 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 TRAV22A0A0B4J277 110 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 LOC101927531A0A1B0GV80 90 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 C16orf90A8MZG2 172 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 NCR3O14931 201 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 GNRH2O43555 120 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 LCA10Q71F78 164 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 SMIM11BQ8TCY0 68 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 UBL5Q9BZL1 73 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 PLAC8Q9NZF1 115 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 ORMDL1Q9P0S3 153 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 PKHD1L1Q86WI1 4243 aa1.92□□□□□ -2.1
USP48-215ENST00000534705 PCLOQ9Y6V0 5065 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 IGHV3-64A0A075B6Q5 118 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 DEFB131BA0A096LNP1 70 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 TRBV6-8A0A0A6YYG3 113 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 H3BQ85 93 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 TMEM256-PLSCR3K7ERE1 68 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 LECT2O14960 151 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 PSCAO43653 123 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 ZNF73O43830 326 aaPredicted RBP1.91□□□□□ -2.1
USP48-215ENST00000534705 LY6G6CO95867 125 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 IGHV3-53P01767 116 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 SPART-AS1P0CW21 52 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 FUSP35637 526 aaKnown RBP eCLIP1.91□□□□□ -2.1
USP48-215ENST00000534705 UBE2BP63146 152 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 NREPQ16612 68 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 ASB16-AS1Q495Z4 193 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 LINC00467Q9BRT7 94 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 CDKN2A-AS1Q9UH64 79 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 FAT1Q14517 4588 aa1.91□□□□□ -2.1
USP48-215ENST00000534705 IGHV3-73A0A0B4J1V6 119 aa1.9□□□□□ -2.11
USP48-215ENST00000534705 TRBV6-4A0A1B0GX49 114 aa1.9□□□□□ -2.11
USP48-215ENST00000534705 CRPP02741 224 aa1.9□□□□□ -2.11
USP48-215ENST00000534705 MGPP08493 103 aa1.9□□□□□ -2.11
USP48-215ENST00000534705 CCL18P55774 89 aa1.9□□□□□ -2.11
USP48-215ENST00000534705 ELOF1P60002 83 aaKnown RBP1.9□□□□□ -2.11
USP48-215ENST00000534705 COX6A2Q02221 97 aa1.9□□□□□ -2.11
USP48-215ENST00000534705 Q6ZTI0 123 aa1.9□□□□□ -2.11
USP48-215ENST00000534705 C7orf65Q6ZTY9 151 aa1.9□□□□□ -2.11
USP48-215ENST00000534705 Q8N814 137 aa1.9□□□□□ -2.11
USP48-215ENST00000534705 ST20-AS1Q8NBB2 130 aa1.9□□□□□ -2.11
USP48-215ENST00000534705 C1orf64Q8NEQ6 169 aa1.9□□□□□ -2.11
USP48-215ENST00000534705 NOP10Q9NPE3 64 aaKnown RBP1.9□□□□□ -2.11
USP48-215ENST00000534705 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.89□□□□□ -2.11
USP48-215ENST00000534705 TRBV10-1A0A0K0K1A3 114 aa1.89□□□□□ -2.11
USP48-215ENST00000534705 M0R2N4 97 aa1.89□□□□□ -2.11
USP48-215ENST00000534705 IGKV4-1P06312 121 aa1.89□□□□□ -2.11
USP48-215ENST00000534705 DEFB130BP0DP73 79 aa1.89□□□□□ -2.11
USP48-215ENST00000534705 DEFB130AP0DP74 79 aa1.89□□□□□ -2.11
USP48-215ENST00000534705 LINC00269Q8N2A0 174 aa1.89□□□□□ -2.11
USP48-215ENST00000534705 Q9BRP9 147 aa1.89□□□□□ -2.11
USP48-215ENST00000534705 CDC42SE2Q9NRR3 84 aa1.89□□□□□ -2.11
USP48-215ENST00000534705 A0A096LPF7 62 aa1.88□□□□□ -2.11
USP48-215ENST00000534705 A8MUU9 505 aa1.88□□□□□ -2.11
USP48-215ENST00000534705 H3BNG1 76 aa1.88□□□□□ -2.11
USP48-215ENST00000534705 HTN1P15515 57 aa1.88□□□□□ -2.11
USP48-215ENST00000534705 HTN3P15516 51 aa1.88□□□□□ -2.11
USP48-215ENST00000534705 LINC01554Q52M75 96 aa1.88□□□□□ -2.11
USP48-215ENST00000534705 LINC00575Q6W349 94 aa1.88□□□□□ -2.11
USP48-215ENST00000534705 ADM2Q7Z4H4 148 aa1.88□□□□□ -2.11
USP48-215ENST00000534705 LIMD2Q9BT23 127 aa1.88□□□□□ -2.11
USP48-215ENST00000534705 CDC42SE1Q9NRR8 79 aa1.88□□□□□ -2.11
USP48-215ENST00000534705 FAT3Q8TDW7 4589 aa1.88□□□□□ -2.11
USP48-215ENST00000534705 MYCBP2O75592 4640 aa1.87□□□□□ -2.11
USP48-215ENST00000534705 TRGV1A0A0A0MS02 117 aa1.87□□□□□ -2.11
USP48-215ENST00000534705 H3BPC8 53 aa1.87□□□□□ -2.11
USP48-215ENST00000534705 CNBPP62633 177 aaKnown RBP1.87□□□□□ -2.11
USP48-215ENST00000534705 MOBPQ13875 183 aa1.87□□□□□ -2.11
USP48-215ENST00000534705 SPINT4Q6UDR6 99 aa1.87□□□□□ -2.11
USP48-215ENST00000534705 Q6ZRN7 208 aaPredicted RBP1.87□□□□□ -2.11
USP48-215ENST00000534705 NBDYA0A0U1RRE5 68 aa1.86□□□□□ -2.11
USP48-215ENST00000534705 HCG22E2RYF7 251 aa1.86□□□□□ -2.11
USP48-215ENST00000534705 IGFL1Q6UW32 110 aa1.86□□□□□ -2.11
USP48-215ENST00000534705 HIGD2AQ9BW72 106 aa1.86□□□□□ -2.11
USP48-215ENST00000534705 KCNQ1DNQ9H478 68 aa1.86□□□□□ -2.11
USP48-215ENST00000534705 PRO0255Q9UI72 69 aa1.86□□□□□ -2.11
USP48-215ENST00000534705 TRGV2A0A075B6R0 118 aa1.85□□□□□ -2.11
USP48-215ENST00000534705 WFDC10BQ8IUB3 73 aa1.85□□□□□ -2.11
USP48-215ENST00000534705 UBE2DNLQ8IWF7 75 aa1.85□□□□□ -2.11
USP48-215ENST00000534705 COX7B2Q8TF08 81 aa1.85□□□□□ -2.11
USP48-215ENST00000534705 LINC01558Q9Y6Z2 57 aa1.85□□□□□ -2.11
USP48-215ENST00000534705 TRGV4A0A0C4DH28 118 aa1.84□□□□□ -2.11
USP48-215ENST00000534705 NDUFB1O75438 58 aa1.84□□□□□ -2.11
USP48-215ENST00000534705 IGLV6-57P01721 117 aa1.84□□□□□ -2.11
USP48-215ENST00000534705 COX7BP24311 80 aa1.84□□□□□ -2.11
USP48-215ENST00000534705 HAMPP81172 84 aa1.84□□□□□ -2.11
USP48-215ENST00000534705 LINC00483Q53H64 154 aa1.84□□□□□ -2.11
USP48-215ENST00000534705 C1orf134Q5TEV5 83 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms