RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 ITPR2Q14571 2701 aa9.07□□□□□ -0.96
PAX6-228ENST00000533333 CELSR3Q9NYQ7 3312 aa9.06□□□□□ -0.96
PAX6-228ENST00000533333 VCANP13611 3396 aa9.06□□□□□ -0.96
PAX6-228ENST00000533333 LAMA1P25391 3075 aa9.05□□□□□ -0.96
PAX6-228ENST00000533333 SPTBN5Q9NRC6 3674 aaKnown RBP9.03□□□□□ -0.96
PAX6-228ENST00000533333 FRYQ5TBA9 3013 aa9.03□□□□□ -0.96
PAX6-228ENST00000533333 TNRC18O15417 2968 aaPredicted RBP8.98□□□□□ -0.97
PAX6-228ENST00000533333 KRTAP13-3Q3SY46 172 aa8.97□□□□□ -0.97
PAX6-228ENST00000533333 REV3LO60673 3130 aa8.97□□□□□ -0.97
PAX6-228ENST00000533333 VPS13AQ96RL7 3174 aa8.94□□□□□ -0.98
PAX6-228ENST00000533333 DSPP15924 2871 aaKnown RBP8.94□□□□□ -0.98
PAX6-228ENST00000533333 WDFY4Q6ZS81 3184 aa8.94□□□□□ -0.98
PAX6-228ENST00000533333 TENM4Q6N022 2769 aa8.93□□□□□ -0.98
PAX6-228ENST00000533333 USP34Q70CQ2 3546 aa8.92□□□□□ -0.98
PAX6-228ENST00000533333 KRTAP12-2P59991 146 aa8.9□□□□□ -0.98
PAX6-228ENST00000533333 ITPR1Q14643 2758 aa8.89□□□□□ -0.99
PAX6-228ENST00000533333 HIVEP1P15822 2718 aa8.87□□□□□ -0.99
PAX6-228ENST00000533333 SPEGQ15772 3267 aa8.86□□□□□ -0.99
PAX6-228ENST00000533333 MYO15AQ9UKN7 3530 aa8.85□□□□□ -0.99
PAX6-228ENST00000533333 FLNCQ14315 2725 aa8.83□□□□□ -1
PAX6-228ENST00000533333 COL6A3P12111 3177 aa8.81□□□□□ -1
PAX6-228ENST00000533333 FREM2Q5SZK8 3169 aa8.81□□□□□ -1
PAX6-228ENST00000533333 NBEAQ8NFP9 2946 aa8.74□□□□□ -1.01
PAX6-228ENST00000533333 KRTAP15-1Q3LI76 137 aa8.73□□□□□ -1.01
PAX6-228ENST00000533333 KRTAP13-4Q3LI77 160 aa8.73□□□□□ -1.01
PAX6-228ENST00000533333 UTP20O75691 2785 aaKnown RBP8.71□□□□□ -1.01
PAX6-228ENST00000533333 APCP25054 2843 aa8.71□□□□□ -1.02
PAX6-228ENST00000533333 TACC2O95359 2948 aa8.7□□□□□ -1.02
PAX6-228ENST00000533333 FRYLO94915 3013 aa8.7□□□□□ -1.02
PAX6-228ENST00000533333 ZZEF1O43149 2961 aa8.68□□□□□ -1.02
PAX6-228ENST00000533333 CRYBG3Q68DQ2 2970 aa8.62□□□□□ -1.03
PAX6-228ENST00000533333 TENM3Q9P273 2699 aa8.62□□□□□ -1.03
PAX6-228ENST00000533333 KALRNO60229 2985 aa8.61□□□□□ -1.03
PAX6-228ENST00000533333 ADGRG4Q8IZF6 3080 aa8.6□□□□□ -1.03
PAX6-228ENST00000533333 WDFY3Q8IZQ1 3526 aa8.6□□□□□ -1.03
PAX6-228ENST00000533333 LRBAP50851 2863 aa8.59□□□□□ -1.03
PAX6-228ENST00000533333 EYSQ5T1H1 3165 aa8.58□□□□□ -1.04
PAX6-228ENST00000533333 DMXL2Q8TDJ6 3036 aa8.57□□□□□ -1.04
PAX6-228ENST00000533333 BOD1L1Q8NFC6 3051 aa8.57□□□□□ -1.04
PAX6-228ENST00000533333 DCHS1Q96JQ0 3298 aa8.56□□□□□ -1.04
PAX6-228ENST00000533333 NIPBLQ6KC79 2804 aaeCLIP8.55□□□□□ -1.04
PAX6-228ENST00000533333 HRNRQ86YZ3 2850 aaPredicted RBP8.55□□□□□ -1.04
PAX6-228ENST00000533333 ASH1LQ9NR48 2969 aaKnown RBP8.54□□□□□ -1.04
PAX6-228ENST00000533333 ATMQ13315 3056 aa8.51□□□□□ -1.05
PAX6-228ENST00000533333 KRTAP12-1P59990 96 aa8.5□□□□□ -1.05
PAX6-228ENST00000533333 CRCT1Q9UGL9 99 aa8.49□□□□□ -1.05
PAX6-228ENST00000533333 DMXL1Q9Y485 3027 aa8.47□□□□□ -1.05
PAX6-228ENST00000533333 ZFHX4Q86UP3 3567 aa8.45□□□□□ -1.06
PAX6-228ENST00000533333 TENM1Q9UKZ4 2725 aa8.42□□□□□ -1.06
PAX6-228ENST00000533333 CELSR2Q9HCU4 2923 aa8.41□□□□□ -1.06
PAX6-228ENST00000533333 CSMD1Q96PZ7 3565 aa8.39□□□□□ -1.07
PAX6-228ENST00000533333 LOC400499M0QZD8 3231 aa8.37□□□□□ -1.07
PAX6-228ENST00000533333 COL12A1Q99715 3063 aa8.37□□□□□ -1.07
PAX6-228ENST00000533333 TENM2Q9NT68 2774 aa8.31□□□□□ -1.08
PAX6-228ENST00000533333 DCHS2Q6V1P9 2916 aa8.3□□□□□ -1.08
PAX6-228ENST00000533333 ASPMQ8IZT6 3477 aa8.29□□□□□ -1.08
PAX6-228ENST00000533333 NF1P21359 2839 aa8.29□□□□□ -1.08
PAX6-228ENST00000533333 SMG1Q96Q15 3661 aaKnown RBP8.28□□□□□ -1.08
PAX6-228ENST00000533333 CFAP47Q6ZTR5 3102 aa8.25□□□□□ -1.09
PAX6-228ENST00000533333 INE1O15225 51 aa8.2□□□□□ -1.1
PAX6-228ENST00000533333 ZANQ9Y493 2812 aa8.14□□□□□ -1.11
PAX6-228ENST00000533333 KRTAP3-1Q9BYR8 98 aa8.14□□□□□ -1.11
PAX6-228ENST00000533333 DMDP11532 3685 aa8.12□□□□□ -1.11
PAX6-228ENST00000533333 KRTAP10-12P60413 245 aa8.11□□□□□ -1.11
PAX6-228ENST00000533333 TGP01266 2768 aa8.1□□□□□ -1.11
PAX6-228ENST00000533333 LAMA5O15230 3695 aa8.07□□□□□ -1.12
PAX6-228ENST00000533333 PDZD2O15018 2839 aa8.06□□□□□ -1.12
PAX6-228ENST00000533333 FBN2P35556 2912 aa8.06□□□□□ -1.12
PAX6-228ENST00000533333 PKD1L1Q8TDX9 2849 aa8.05□□□□□ -1.12
PAX6-228ENST00000533333 MXRA5Q9NR99 2828 aa7.98□□□□□ -1.13
PAX6-228ENST00000533333 SVEP1Q4LDE5 3571 aa7.97□□□□□ -1.13
PAX6-228ENST00000533333 KRTAP10-6P60371 365 aaPredicted RBP7.96□□□□□ -1.13
PAX6-228ENST00000533333 RELNP78509 3460 aa7.94□□□□□ -1.14
PAX6-228ENST00000533333 SPENQ96T58 3664 aaKnown RBP7.93□□□□□ -1.14
PAX6-228ENST00000533333 BSNQ9UPA5 3926 aa7.92□□□□□ -1.14
PAX6-228ENST00000533333 VWFP04275 2813 aa7.91□□□□□ -1.14
PAX6-228ENST00000533333 ANK3Q12955 4377 aaKnown RBP7.87□□□□□ -1.15
PAX6-228ENST00000533333 KRTAP12-3P60328 96 aa7.84□□□□□ -1.15
PAX6-228ENST00000533333 MUC3AQ02505 3323 aa7.83□□□□□ -1.16
PAX6-228ENST00000533333 ZFHX3Q15911 3703 aa7.82□□□□□ -1.16
PAX6-228ENST00000533333 KRTAP10-5P60370 271 aa7.77□□□□□ -1.17
PAX6-228ENST00000533333 SRRM2Q9UQ35 2752 aaKnown RBP7.76□□□□□ -1.17
PAX6-228ENST00000533333 CELSR1Q9NYQ6 3014 aa7.75□□□□□ -1.17
PAX6-228ENST00000533333 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
PAX6-228ENST00000533333 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
PAX6-228ENST00000533333 MT1HL1P0DM35 61 aa7.62□□□□□ -1.19
PAX6-228ENST00000533333 KRTAP8-1Q8IUC2 63 aa7.61□□□□□ -1.19
PAX6-228ENST00000533333 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
PAX6-228ENST00000533333 OTOGQ6ZRI0 2925 aa7.57□□□□□ -1.2
PAX6-228ENST00000533333 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
PAX6-228ENST00000533333 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
PAX6-228ENST00000533333 NBPF19A0A087WUL8 3843 aa7.5□□□□□ -1.21
PAX6-228ENST00000533333 VPS13CQ709C8 3753 aa7.48□□□□□ -1.21
PAX6-228ENST00000533333 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.21
PAX6-228ENST00000533333 AKAP9Q99996 3911 aa7.46□□□□□ -1.22
PAX6-228ENST00000533333 CUBNO60494 3623 aa7.43□□□□□ -1.22
PAX6-228ENST00000533333 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
PAX6-228ENST00000533333 HUWE1Q7Z6Z7 4374 aaKnown RBP7.33□□□□□ -1.24
PAX6-228ENST00000533333 CSMD2Q7Z408 3487 aa7.28□□□□□ -1.24
PAX6-228ENST00000533333 FBN1P35555 2871 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms