RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 IGKV4-1P06312 121 aa11.52□□□□□ -0.57
GSDMD-212ENST00000533063 K7EQZ3 153 aa11.51□□□□□ -0.57
GSDMD-212ENST00000533063 ATOX1O00244 68 aa11.51□□□□□ -0.57
GSDMD-212ENST00000533063 A0A087WVE0 104 aa11.5□□□□□ -0.57
GSDMD-212ENST00000533063 J3KT08 172 aa11.49□□□□□ -0.57
GSDMD-212ENST00000533063 A8MWP4 228 aa11.48□□□□□ -0.57
GSDMD-212ENST00000533063 KRTAP29-1A8MX34 341 aaPredicted RBP11.48□□□□□ -0.57
GSDMD-212ENST00000533063 COX7CP15954 63 aa11.46□□□□□ -0.57
GSDMD-212ENST00000533063 PRR15Q8IV56 129 aa11.44□□□□□ -0.58
GSDMD-212ENST00000533063 RETNLBQ9BQ08 111 aa11.41□□□□□ -0.58
GSDMD-212ENST00000533063 A0A1B0GVX0 72 aa11.39□□□□□ -0.59
GSDMD-212ENST00000533063 NDUFB1O75438 58 aa11.37□□□□□ -0.59
GSDMD-212ENST00000533063 NOTCH2NLQ7Z3S9 236 aa11.37□□□□□ -0.59
GSDMD-212ENST00000533063 SERP2Q8N6R1 65 aa11.37□□□□□ -0.59
GSDMD-212ENST00000533063 IGHV6-1A0A0B4J1U7 121 aa11.36□□□□□ -0.59
GSDMD-212ENST00000533063 SVIPQ8NHG7 77 aa11.36□□□□□ -0.59
GSDMD-212ENST00000533063 MMP24-AS1A0A0U1RRL7 71 aa11.33□□□□□ -0.6
GSDMD-212ENST00000533063 PCLOQ9Y6V0 5065 aa11.32□□□□□ -0.6
GSDMD-212ENST00000533063 C8orf17Q9NRJ1 99 aa11.31□□□□□ -0.6
GSDMD-212ENST00000533063 HCG22E2RYF7 251 aa11.3□□□□□ -0.6
GSDMD-212ENST00000533063 SMIM20Q8N5G0 67 aa11.28□□□□□ -0.6
GSDMD-212ENST00000533063 WFDC13Q8IUB5 93 aa11.28□□□□□ -0.6
GSDMD-212ENST00000533063 J3QL48 77 aa11.26□□□□□ -0.61
GSDMD-212ENST00000533063 RPS28P62857 69 aaKnown RBP11.24□□□□□ -0.61
GSDMD-212ENST00000533063 CASC2Q6XLA1 102 aa11.24□□□□□ -0.61
GSDMD-212ENST00000533063 hDV103S1A0JD37 113 aa11.23□□□□□ -0.61
GSDMD-212ENST00000533063 C8orf87E5RJ46 101 aa11.23□□□□□ -0.61
GSDMD-212ENST00000533063 LINC00313P59037 77 aa11.23□□□□□ -0.61
GSDMD-212ENST00000533063 TMEM258P61165 79 aa11.23□□□□□ -0.61
GSDMD-212ENST00000533063 KRTAP16-1A8MUX0 517 aa11.21□□□□□ -0.62
GSDMD-212ENST00000533063 FP248Q71RG6 208 aaPredicted RBP11.21□□□□□ -0.62
GSDMD-212ENST00000533063 CYSTM1Q9H1C7 97 aa11.17□□□□□ -0.62
GSDMD-212ENST00000533063 TMEM254Q8TBM7 123 aa11.16□□□□□ -0.62
GSDMD-212ENST00000533063 C9orf92A6NGG3 77 aa11.16□□□□□ -0.62
GSDMD-212ENST00000533063 MRPL34Q9BQ48 92 aaKnown RBP11.15□□□□□ -0.62
GSDMD-212ENST00000533063 IGLV7-46A0A075B6I9 117 aa11.14□□□□□ -0.63
GSDMD-212ENST00000533063 TRAV7A0A075B6U4 112 aa11.14□□□□□ -0.63
GSDMD-212ENST00000533063 OCR1Q9BZK8 76 aa11.14□□□□□ -0.63
GSDMD-212ENST00000533063 PRR4Q16378 134 aa11.11□□□□□ -0.63
GSDMD-212ENST00000533063 KRTAP13-3Q3SY46 172 aa11.09□□□□□ -0.63
GSDMD-212ENST00000533063 Q8N9P0 234 aaPredicted RBP11.09□□□□□ -0.63
GSDMD-212ENST00000533063 LPAP08519 4548 aa11.06□□□□□ -0.64
GSDMD-212ENST00000533063 KLKP1Q107X0 134 aa11.05□□□□□ -0.64
GSDMD-212ENST00000533063 HERC1Q15751 4861 aa11.05□□□□□ -0.64
GSDMD-212ENST00000533063 NDUFS5O43920 106 aa11.03□□□□□ -0.64
GSDMD-212ENST00000533063 C20orf197Q8N268 126 aa11.02□□□□□ -0.65
GSDMD-212ENST00000533063 C20orf166-AS1Q96NR2 134 aa11.01□□□□□ -0.65
GSDMD-212ENST00000533063 TPRXLQ17RH7 258 aa11□□□□□ -0.65
GSDMD-212ENST00000533063 A8MUU9 505 aa10.99□□□□□ -0.65
GSDMD-212ENST00000533063 H7BZZ5 65 aa10.98□□□□□ -0.65
GSDMD-212ENST00000533063 TP53AIP1Q9HCN2 124 aa10.98□□□□□ -0.65
GSDMD-212ENST00000533063 XP32Q5T750 250 aa10.97□□□□□ -0.65
GSDMD-212ENST00000533063 Q5W150 140 aa10.96□□□□□ -0.65
GSDMD-212ENST00000533063 NDUFC1O43677 76 aa10.95□□□□□ -0.66
GSDMD-212ENST00000533063 LRP2P98164 4655 aa10.94□□□□□ -0.66
GSDMD-212ENST00000533063 FAM236DA0A1B0GTK5 79 aa10.93□□□□□ -0.66
GSDMD-212ENST00000533063 FAM236CP0DP71 79 aa10.93□□□□□ -0.66
GSDMD-212ENST00000533063 Q75L30 129 aa10.93□□□□□ -0.66
GSDMD-212ENST00000533063 TRAV22A0A0B4J277 110 aa10.89□□□□□ -0.67
GSDMD-212ENST00000533063 C5orf47Q569G3 176 aa10.88□□□□□ -0.67
GSDMD-212ENST00000533063 SERP1Q9Y6X1 66 aa10.88□□□□□ -0.67
GSDMD-212ENST00000533063 H0Y9P7 68 aa10.86□□□□□ -0.67
GSDMD-212ENST00000533063 ATP5EP56381 51 aaPredicted RBP10.86□□□□□ -0.67
GSDMD-212ENST00000533063 RPL37P61927 97 aaKnown RBP10.86□□□□□ -0.67
GSDMD-212ENST00000533063 HMCN2Q8NDA2 5059 aa10.85□□□□□ -0.67
GSDMD-212ENST00000533063 ZCCHC13Q8WW36 166 aaKnown RBP10.85□□□□□ -0.67
GSDMD-212ENST00000533063 SNURFQ9Y675 71 aa10.83□□□□□ -0.68
GSDMD-212ENST00000533063 A0A0U1RQV1 116 aa10.82□□□□□ -0.68
GSDMD-212ENST00000533063 MP68P56378 58 aa10.79□□□□□ -0.68
GSDMD-212ENST00000533063 LINC00208Q96KT6 92 aa10.79□□□□□ -0.68
GSDMD-212ENST00000533063 C1orf64Q8NEQ6 169 aa10.77□□□□□ -0.69
GSDMD-212ENST00000533063 H3BPC8 53 aa10.74□□□□□ -0.69
GSDMD-212ENST00000533063 ATP11AUNQ6ZP68 121 aa10.73□□□□□ -0.69
GSDMD-212ENST00000533063 SMIM26A0A096LP01 95 aa10.7□□□□□ -0.7
GSDMD-212ENST00000533063 IGKV2-30P06310 120 aa10.7□□□□□ -0.7
GSDMD-212ENST00000533063 LOC101927531A0A1B0GV80 90 aa10.68□□□□□ -0.7
GSDMD-212ENST00000533063 PCOTHQ58A44 107 aa10.68□□□□□ -0.7
GSDMD-212ENST00000533063 CYP4F30PQ9H0H9 118 aa10.68□□□□□ -0.7
GSDMD-212ENST00000533063 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
GSDMD-212ENST00000533063 IGKV2D-30A0A075B6S6 120 aa10.65□□□□□ -0.7
GSDMD-212ENST00000533063 MUC17Q685J3 4493 aa10.64□□□□□ -0.71
GSDMD-212ENST00000533063 SPINK7P58062 85 aa10.6□□□□□ -0.71
GSDMD-212ENST00000533063 C7orf65Q6ZTY9 151 aa10.6□□□□□ -0.71
GSDMD-212ENST00000533063 SEC61BP60468 96 aaKnown RBP10.56□□□□□ -0.72
GSDMD-212ENST00000533063 KRTAP4-1Q9BYQ7 146 aa10.51□□□□□ -0.73
GSDMD-212ENST00000533063 HRES1P13985 223 aa10.5□□□□□ -0.73
GSDMD-212ENST00000533063 MUC2Q02817 5179 aa10.45□□□□□ -0.74
GSDMD-212ENST00000533063 UBR4Q5T4S7 5183 aa10.43□□□□□ -0.74
GSDMD-212ENST00000533063 SPANXA2-OT1Q8N9U9 137 aa10.43□□□□□ -0.74
GSDMD-212ENST00000533063 PRO0628Q9UI54 55 aa10.39□□□□□ -0.75
GSDMD-212ENST00000533063 MPLKIPQ8TAP9 179 aa10.36□□□□□ -0.75
GSDMD-212ENST00000533063 KRTAP3-1Q9BYR8 98 aa10.35□□□□□ -0.75
GSDMD-212ENST00000533063 Q1T7F1 81 aa10.34□□□□□ -0.75
GSDMD-212ENST00000533063 DMAC1Q96GE9 116 aa10.3□□□□□ -0.76
GSDMD-212ENST00000533063 COX6B2Q6YFQ2 88 aa10.29□□□□□ -0.76
GSDMD-212ENST00000533063 RNF213Q63HN8 5207 aa10.26□□□□□ -0.77
GSDMD-212ENST00000533063 KRTAP19-2Q3LHN2 52 aa10.22□□□□□ -0.77
GSDMD-212ENST00000533063 V9GYY9 64 aa10.21□□□□□ -0.78
GSDMD-212ENST00000533063 A8MUN3 132 aa10.2□□□□□ -0.78
GSDMD-212ENST00000533063 RBM12B-AS1Q9P1G2 102 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms