RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 Q6ZSA8 131 aa3.45□□□□□ -1.86
RDX-213ENST00000532461 C1orf64Q8NEQ6 169 aa3.45□□□□□ -1.86
RDX-213ENST00000532461 A0A1B0GVX0 72 aa3.44□□□□□ -1.86
RDX-213ENST00000532461 DEFB116Q30KQ4 102 aa3.44□□□□□ -1.86
RDX-213ENST00000532461 KRTAP13-3Q3SY46 172 aa3.44□□□□□ -1.86
RDX-213ENST00000532461 C4orf48Q5BLP8 95 aa3.43□□□□□ -1.86
RDX-213ENST00000532461 SACSQ9NZJ4 4579 aa3.43□□□□□ -1.86
RDX-213ENST00000532461 H0Y9P7 68 aa3.43□□□□□ -1.86
RDX-213ENST00000532461 IGLV7-43P04211 117 aa3.43□□□□□ -1.86
RDX-213ENST00000532461 C8orf17Q9NRJ1 99 aa3.43□□□□□ -1.86
RDX-213ENST00000532461 IGLV7-46A0A075B6I9 117 aa3.43□□□□□ -1.86
RDX-213ENST00000532461 WFDC13Q8IUB5 93 aa3.43□□□□□ -1.86
RDX-213ENST00000532461 PKHD1L1Q86WI1 4243 aa3.42□□□□□ -1.86
RDX-213ENST00000532461 C1orf134Q5TEV5 83 aa3.42□□□□□ -1.86
RDX-213ENST00000532461 SSBP3-AS1Q7Z2R9 100 aa3.42□□□□□ -1.86
RDX-213ENST00000532461 PKHD1P08F94 4074 aa3.41□□□□□ -1.86
RDX-213ENST00000532461 DNHD1Q96M86 4753 aa3.4□□□□□ -1.87
RDX-213ENST00000532461 LINC00208Q96KT6 92 aa3.4□□□□□ -1.87
RDX-213ENST00000532461 PMAIP1Q13794 54 aa3.39□□□□□ -1.87
RDX-213ENST00000532461 IGLV9-49A0A0B4J1Y8 123 aa3.39□□□□□ -1.87
RDX-213ENST00000532461 MRPL34Q9BQ48 92 aaKnown RBP3.39□□□□□ -1.87
RDX-213ENST00000532461 VPS13BQ7Z7G8 4022 aa3.39□□□□□ -1.87
RDX-213ENST00000532461 HYDINQ4G0P3 5121 aa3.39□□□□□ -1.87
RDX-213ENST00000532461 C8orf87E5RJ46 101 aa3.38□□□□□ -1.87
RDX-213ENST00000532461 LRP1BQ9NZR2 4599 aa3.38□□□□□ -1.87
RDX-213ENST00000532461 Q8N9P0 234 aaPredicted RBP3.36□□□□□ -1.87
RDX-213ENST00000532461 CIRBP-AS1Q8TBR5 109 aa3.36□□□□□ -1.87
RDX-213ENST00000532461 LOC101927531A0A1B0GV80 90 aa3.36□□□□□ -1.87
RDX-213ENST00000532461 MPLKIPQ8TAP9 179 aa3.36□□□□□ -1.87
RDX-213ENST00000532461 A0A087X002 238 aa3.35□□□□□ -1.87
RDX-213ENST00000532461 KRTAP1-4P0C5Y4 121 aa3.35□□□□□ -1.87
RDX-213ENST00000532461 KRTAP10-2P60368 255 aa3.35□□□□□ -1.87
RDX-213ENST00000532461 KRTAP13-2Q52LG2 175 aa3.35□□□□□ -1.87
RDX-213ENST00000532461 NOTCH2NLQ7Z3S9 236 aa3.35□□□□□ -1.87
RDX-213ENST00000532461 APOBP04114 4563 aaKnown RBP3.35□□□□□ -1.87
RDX-213ENST00000532461 KRTAP16-1A8MUX0 517 aa3.35□□□□□ -1.87
RDX-213ENST00000532461 LIMD2Q9BT23 127 aa3.35□□□□□ -1.87
RDX-213ENST00000532461 RPS29P62273 56 aaKnown RBP3.34□□□□□ -1.87
RDX-213ENST00000532461 TGP01266 2768 aa3.34□□□□□ -1.87
RDX-213ENST00000532461 IGHV6-1A0A0B4J1U7 121 aa3.34□□□□□ -1.88
RDX-213ENST00000532461 ANAPC11Q9NYG5 84 aa3.34□□□□□ -1.88
RDX-213ENST00000532461 PRR26Q8N8Z3 221 aa3.33□□□□□ -1.88
RDX-213ENST00000532461 CDK2AP2O75956 126 aa3.33□□□□□ -1.88
RDX-213ENST00000532461 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
RDX-213ENST00000532461 Q5VV11 94 aa3.32□□□□□ -1.88
RDX-213ENST00000532461 Q75L30 129 aa3.32□□□□□ -1.88
RDX-213ENST00000532461 COA5Q86WW8 74 aa3.32□□□□□ -1.88
RDX-213ENST00000532461 H3BS24 57 aa3.32□□□□□ -1.88
RDX-213ENST00000532461 Q5W150 140 aa3.32□□□□□ -1.88
RDX-213ENST00000532461 LINC01558Q9Y6Z2 57 aa3.32□□□□□ -1.88
RDX-213ENST00000532461 KRTAP9-2Q9BYQ4 174 aa3.31□□□□□ -1.88
RDX-213ENST00000532461 LY6G6CO95867 125 aa3.31□□□□□ -1.88
RDX-213ENST00000532461 HRES1P13985 223 aa3.3□□□□□ -1.88
RDX-213ENST00000532461 FAM229AH3BQW9 127 aa3.3□□□□□ -1.88
RDX-213ENST00000532461 RBM12B-AS1Q9P1G2 102 aa3.3□□□□□ -1.88
RDX-213ENST00000532461 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
RDX-213ENST00000532461 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
RDX-213ENST00000532461 LINC00313P59037 77 aa3.29□□□□□ -1.88
RDX-213ENST00000532461 DYNC1H1Q14204 4646 aaKnown RBP3.29□□□□□ -1.88
RDX-213ENST00000532461 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
RDX-213ENST00000532461 IGKV2-30P06310 120 aa3.29□□□□□ -1.88
RDX-213ENST00000532461 PRR4Q16378 134 aa3.29□□□□□ -1.88
RDX-213ENST00000532461 SPINK1P00995 79 aa3.28□□□□□ -1.88
RDX-213ENST00000532461 SPINK6Q6UWN8 80 aa3.28□□□□□ -1.88
RDX-213ENST00000532461 A8MU10 97 aa3.27□□□□□ -1.89
RDX-213ENST00000532461 A8MUN3 132 aa3.27□□□□□ -1.89
RDX-213ENST00000532461 KRTAP10-4P60372 401 aaPredicted RBP3.27□□□□□ -1.89
RDX-213ENST00000532461 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
RDX-213ENST00000532461 A0A1B0GVY2 172 aa3.26□□□□□ -1.89
RDX-213ENST00000532461 PCOTHQ58A44 107 aa3.26□□□□□ -1.89
RDX-213ENST00000532461 NDUFS5O43920 106 aa3.26□□□□□ -1.89
RDX-213ENST00000532461 TNXBP22105 4242 aa3.26□□□□□ -1.89
RDX-213ENST00000532461 PSPHP1O15172 72 aa3.25□□□□□ -1.89
RDX-213ENST00000532461 LCE3BQ5TA77 95 aa3.25□□□□□ -1.89
RDX-213ENST00000532461 ACYP2P14621 99 aa3.25□□□□□ -1.89
RDX-213ENST00000532461 HSPG2P98160 4391 aa3.25□□□□□ -1.89
RDX-213ENST00000532461 SPAG11AQ6PDA7 123 aa3.25□□□□□ -1.89
RDX-213ENST00000532461 CDC42SE1Q9NRR8 79 aa3.23□□□□□ -1.89
RDX-213ENST00000532461 PRR15LQ9BU68 103 aa3.23□□□□□ -1.89
RDX-213ENST00000532461 RYR2Q92736 4967 aa3.23□□□□□ -1.89
RDX-213ENST00000532461 ATP11AUNQ6ZP68 121 aa3.22□□□□□ -1.89
RDX-213ENST00000532461 LCA10Q71F78 164 aa3.22□□□□□ -1.89
RDX-213ENST00000532461 PLA2G1BP04054 148 aaKnown RBP3.22□□□□□ -1.89
RDX-213ENST00000532461 TYMSOSQ8TAI1 123 aa3.21□□□□□ -1.9
RDX-213ENST00000532461 IGKV2D-30A0A075B6S6 120 aa3.21□□□□□ -1.9
RDX-213ENST00000532461 A8MUU9 505 aa3.2□□□□□ -1.9
RDX-213ENST00000532461 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
RDX-213ENST00000532461 C20orf166-AS1Q96NR2 134 aa3.2□□□□□ -1.9
RDX-213ENST00000532461 CHKB-CPT1BH3BT56 60 aa3.2□□□□□ -1.9
RDX-213ENST00000532461 LINC00304Q8N9R0 145 aa3.19□□□□□ -1.9
RDX-213ENST00000532461 FAT1Q14517 4588 aa3.19□□□□□ -1.9
RDX-213ENST00000532461 SPTSSBQ8NFR3 76 aa3.19□□□□□ -1.9
RDX-213ENST00000532461 KRTAP4-8A0A0G2JLE6 195 aa3.18□□□□□ -1.9
RDX-213ENST00000532461 A6NN06 94 aa3.18□□□□□ -1.9
RDX-213ENST00000532461 FAT3Q8TDW7 4589 aa3.16□□□□□ -1.9
RDX-213ENST00000532461 SPINK7P58062 85 aa3.16□□□□□ -1.9
RDX-213ENST00000532461 C7orf65Q6ZTY9 151 aa3.16□□□□□ -1.9
RDX-213ENST00000532461 A6NED7 52 aa3.15□□□□□ -1.9
RDX-213ENST00000532461 SPATA8Q6RVD6 105 aa3.15□□□□□ -1.9
RDX-213ENST00000532461 KRTAP9-9Q9BYP9 154 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms