RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ATP11AUNQ6ZP68 121 aa6.76□□□□□ -1.33
NXF1-211ENST00000531709 A0A1B0GU69 56 aa6.76□□□□□ -1.33
NXF1-211ENST00000531709 Q6ZRN7 208 aaPredicted RBP6.76□□□□□ -1.33
NXF1-211ENST00000531709 KRTAP13-1Q8IUC0 172 aa6.75□□□□□ -1.33
NXF1-211ENST00000531709 Q96NJ1 140 aa6.75□□□□□ -1.33
NXF1-211ENST00000531709 Q75L30 129 aa6.74□□□□□ -1.33
NXF1-211ENST00000531709 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
NXF1-211ENST00000531709 SSBP3-AS1Q7Z2R9 100 aa6.73□□□□□ -1.33
NXF1-211ENST00000531709 PLAC8Q9NZF1 115 aa6.73□□□□□ -1.33
NXF1-211ENST00000531709 SPINK7P58062 85 aa6.72□□□□□ -1.33
NXF1-211ENST00000531709 LINC00483Q53H64 154 aa6.72□□□□□ -1.33
NXF1-211ENST00000531709 Q5W150 140 aa6.72□□□□□ -1.33
NXF1-211ENST00000531709 LCA10Q71F78 164 aa6.72□□□□□ -1.33
NXF1-211ENST00000531709 CDC42SE1Q9NRR8 79 aa6.72□□□□□ -1.33
NXF1-211ENST00000531709 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
NXF1-211ENST00000531709 C8orf87E5RJ46 101 aa6.71□□□□□ -1.34
NXF1-211ENST00000531709 Q6ZR54 194 aa6.71□□□□□ -1.34
NXF1-211ENST00000531709 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
NXF1-211ENST00000531709 KTN1-AS1Q86SY8 53 aa6.7□□□□□ -1.34
NXF1-211ENST00000531709 ANK2Q01484 3957 aa6.69□□□□□ -1.34
NXF1-211ENST00000531709 PLA2G1BP04054 148 aaKnown RBP6.68□□□□□ -1.34
NXF1-211ENST00000531709 TYMSOSQ8TAI1 123 aa6.66□□□□□ -1.34
NXF1-211ENST00000531709 RBM12B-AS1Q9P1G2 102 aa6.66□□□□□ -1.34
NXF1-211ENST00000531709 FBN3Q75N90 2809 aa6.64□□□□□ -1.35
NXF1-211ENST00000531709 DNAH10Q8IVF4 4471 aa6.63□□□□□ -1.35
NXF1-211ENST00000531709 KRTAP10-2P60368 255 aa6.63□□□□□ -1.35
NXF1-211ENST00000531709 HUWE1Q7Z6Z7 4374 aaKnown RBP6.61□□□□□ -1.35
NXF1-211ENST00000531709 Q8N1X5 172 aa6.6□□□□□ -1.35
NXF1-211ENST00000531709 UQCR11O14957 56 aa6.59□□□□□ -1.36
NXF1-211ENST00000531709 MIR22HGQ0VDD5 57 aa6.58□□□□□ -1.36
NXF1-211ENST00000531709 MEGF8Q7Z7M0 2845 aa6.57□□□□□ -1.36
NXF1-211ENST00000531709 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
NXF1-211ENST00000531709 ASB16-AS1Q495Z4 193 aa6.57□□□□□ -1.36
NXF1-211ENST00000531709 C9orf92A6NGG3 77 aa6.56□□□□□ -1.36
NXF1-211ENST00000531709 PRAC1Q96KF2 57 aa6.55□□□□□ -1.36
NXF1-211ENST00000531709 KRTAP10-1P60331 282 aa6.54□□□□□ -1.36
NXF1-211ENST00000531709 DMAC1Q96GE9 116 aa6.53□□□□□ -1.36
NXF1-211ENST00000531709 LYSTQ99698 3801 aa6.51□□□□□ -1.37
NXF1-211ENST00000531709 KRTAP13-2Q52LG2 175 aa6.51□□□□□ -1.37
NXF1-211ENST00000531709 A6NN06 94 aa6.51□□□□□ -1.37
NXF1-211ENST00000531709 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
NXF1-211ENST00000531709 CMYA5Q8N3K9 4069 aa6.47□□□□□ -1.37
NXF1-211ENST00000531709 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.37
NXF1-211ENST00000531709 DNAH9Q9NYC9 4486 aa6.43□□□□□ -1.38
NXF1-211ENST00000531709 ADM2Q7Z4H4 148 aa6.43□□□□□ -1.38
NXF1-211ENST00000531709 PLECQ15149 4684 aaKnown RBP6.42□□□□□ -1.38
NXF1-211ENST00000531709 K7ERS5 55 aa6.4□□□□□ -1.38
NXF1-211ENST00000531709 FLG2Q5D862 2391 aaPredicted RBP6.4□□□□□ -1.38
NXF1-211ENST00000531709 A0A0A0MQY5 61 aa6.39□□□□□ -1.39
NXF1-211ENST00000531709 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
NXF1-211ENST00000531709 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
NXF1-211ENST00000531709 KRTAP1-4P0C5Y4 121 aa6.33□□□□□ -1.4
NXF1-211ENST00000531709 CSAG1Q6PB30 78 aa6.33□□□□□ -1.4
NXF1-211ENST00000531709 DNAH7Q8WXX0 4024 aa6.3□□□□□ -1.4
NXF1-211ENST00000531709 A0A1B0GU33 70 aa6.3□□□□□ -1.4
NXF1-211ENST00000531709 KRTAP16-1A8MUX0 517 aa6.3□□□□□ -1.4
NXF1-211ENST00000531709 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
NXF1-211ENST00000531709 DNAH1Q9P2D7 4330 aa6.3□□□□□ -1.4
NXF1-211ENST00000531709 DNAH3Q8TD57 4116 aa6.29□□□□□ -1.4
NXF1-211ENST00000531709 Q6ZSA8 131 aa6.27□□□□□ -1.4
NXF1-211ENST00000531709 STARD9Q9P2P6 4700 aa6.26□□□□□ -1.41
NXF1-211ENST00000531709 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
NXF1-211ENST00000531709 FRAS1Q86XX4 4008 aa6.24□□□□□ -1.41
NXF1-211ENST00000531709 A0A0D9SG42 100 aa6.23□□□□□ -1.41
NXF1-211ENST00000531709 KMT2AQ03164 3969 aa6.23□□□□□ -1.41
NXF1-211ENST00000531709 DNAH8Q96JB1 4490 aa6.21□□□□□ -1.42
NXF1-211ENST00000531709 DNAH11Q96DT5 4516 aa6.2□□□□□ -1.42
NXF1-211ENST00000531709 DNHD1Q96M86 4753 aa6.18□□□□□ -1.42
NXF1-211ENST00000531709 PRKDCP78527 4128 aaKnown RBP6.17□□□□□ -1.42
NXF1-211ENST00000531709 H1FX-AS1Q4G0G2 97 aa6.15□□□□□ -1.42
NXF1-211ENST00000531709 VPS13DQ5THJ4 4388 aa6.15□□□□□ -1.43
NXF1-211ENST00000531709 DNAH17Q9UFH2 4485 aa6.13□□□□□ -1.43
NXF1-211ENST00000531709 COX6B2Q6YFQ2 88 aa6.11□□□□□ -1.43
NXF1-211ENST00000531709 H0YAA0 97 aa6.1□□□□□ -1.43
NXF1-211ENST00000531709 RPS29P62273 56 aaKnown RBP6.1□□□□□ -1.43
NXF1-211ENST00000531709 A8MUU9 505 aa6.1□□□□□ -1.43
NXF1-211ENST00000531709 C20orf166-AS1Q96NR2 134 aa6.08□□□□□ -1.44
NXF1-211ENST00000531709 LRP1BQ9NZR2 4599 aa6.08□□□□□ -1.44
NXF1-211ENST00000531709 DNAH2Q9P225 4427 aa6.08□□□□□ -1.44
NXF1-211ENST00000531709 HECTD4Q9Y4D8 3996 aa6.07□□□□□ -1.44
NXF1-211ENST00000531709 DNAH6Q9C0G6 4158 aa6.06□□□□□ -1.44
NXF1-211ENST00000531709 SPINT4Q6UDR6 99 aa6.05□□□□□ -1.44
NXF1-211ENST00000531709 S4R3F8 94 aa6.01□□□□□ -1.45
NXF1-211ENST00000531709 RPL37P61927 97 aaKnown RBP6□□□□□ -1.45
NXF1-211ENST00000531709 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
NXF1-211ENST00000531709 KRTAP3-1Q9BYR8 98 aa6□□□□□ -1.45
NXF1-211ENST00000531709 Q5VSD8 79 aa5.99□□□□□ -1.45
NXF1-211ENST00000531709 DYNC2H1Q8NCM8 4307 aaKnown RBP5.98□□□□□ -1.45
NXF1-211ENST00000531709 ROMO1P60602 79 aa5.96□□□□□ -1.46
NXF1-211ENST00000531709 J3QL48 77 aa5.95□□□□□ -1.46
NXF1-211ENST00000531709 DNAH5Q8TE73 4624 aa5.94□□□□□ -1.46
NXF1-211ENST00000531709 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
NXF1-211ENST00000531709 FAT1Q14517 4588 aa5.92□□□□□ -1.46
NXF1-211ENST00000531709 KRTAP21-3Q3LHN1 58 aa5.9□□□□□ -1.47
NXF1-211ENST00000531709 ALMS1Q8TCU4 4167 aa5.89□□□□□ -1.47
NXF1-211ENST00000531709 XP32Q5T750 250 aa5.84□□□□□ -1.47
NXF1-211ENST00000531709 HYDINQ4G0P3 5121 aa5.84□□□□□ -1.47
NXF1-211ENST00000531709 A0A1B0GVY2 172 aa5.84□□□□□ -1.48
NXF1-211ENST00000531709 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
NXF1-211ENST00000531709 P0C880 135 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms