RNA–Protein interactions for RNA: ENST00000531696.5

KDM2A-213, Transcript of lysine demethylase 2A, humanhuman

TSL 5

Gene KDM2A, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-213ENST00000531696 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
KDM2A-213ENST00000531696 AKAP9Q99996 3911 aa6.67□□□□□ -1.34
KDM2A-213ENST00000531696 A8MUU9 505 aa6.67□□□□□ -1.34
KDM2A-213ENST00000531696 H3BNG1 76 aa6.67□□□□□ -1.34
KDM2A-213ENST00000531696 NIPBLQ6KC79 2804 aaeCLIP6.66□□□□□ -1.34
KDM2A-213ENST00000531696 LUZP6Q538Z0 58 aa6.65□□□□□ -1.34
KDM2A-213ENST00000531696 Q96NJ1 140 aa6.65□□□□□ -1.35
KDM2A-213ENST00000531696 PLAC8Q9NZF1 115 aa6.65□□□□□ -1.35
KDM2A-213ENST00000531696 LY6G6CO95867 125 aa6.6□□□□□ -1.35
KDM2A-213ENST00000531696 IGLV5-52A0A0A0MRZ9 124 aa6.58□□□□□ -1.36
KDM2A-213ENST00000531696 MXRA5Q9NR99 2828 aa6.58□□□□□ -1.36
KDM2A-213ENST00000531696 LINC00483Q53H64 154 aa6.57□□□□□ -1.36
KDM2A-213ENST00000531696 NUPR2A6NF83 97 aa6.56□□□□□ -1.36
KDM2A-213ENST00000531696 PSORS1C2Q9UIG4 136 aa6.56□□□□□ -1.36
KDM2A-213ENST00000531696 C20orf166-AS1Q96NR2 134 aa6.55□□□□□ -1.36
KDM2A-213ENST00000531696 LINC00304Q8N9R0 145 aa6.54□□□□□ -1.36
KDM2A-213ENST00000531696 ITPR2Q14571 2701 aa6.54□□□□□ -1.36
KDM2A-213ENST00000531696 KRTAP7-1Q8IUC3 87 aa6.54□□□□□ -1.36
KDM2A-213ENST00000531696 SPRR1BP22528 89 aa6.54□□□□□ -1.36
KDM2A-213ENST00000531696 PDZD2O15018 2839 aa6.51□□□□□ -1.37
KDM2A-213ENST00000531696 KRTAP10-3P60369 221 aa6.5□□□□□ -1.37
KDM2A-213ENST00000531696 SRRM2Q9UQ35 2752 aaKnown RBP6.5□□□□□ -1.37
KDM2A-213ENST00000531696 KRTAP11-1Q8IUC1 163 aa6.47□□□□□ -1.37
KDM2A-213ENST00000531696 H1FX-AS1Q4G0G2 97 aa6.46□□□□□ -1.38
KDM2A-213ENST00000531696 PANO1I0J062 215 aa6.45□□□□□ -1.38
KDM2A-213ENST00000531696 RPL37P61927 97 aaKnown RBP6.42□□□□□ -1.38
KDM2A-213ENST00000531696 C9orf92A6NGG3 77 aa6.42□□□□□ -1.38
KDM2A-213ENST00000531696 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
KDM2A-213ENST00000531696 WWC2-AS2Q96NR7 200 aa6.41□□□□□ -1.38
KDM2A-213ENST00000531696 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.4□□□□□ -1.38
KDM2A-213ENST00000531696 P0C880 135 aa6.4□□□□□ -1.39
KDM2A-213ENST00000531696 KMT2BQ9UMN6 2715 aaPredicted RBP6.4□□□□□ -1.39
KDM2A-213ENST00000531696 Q6ZSA8 131 aa6.39□□□□□ -1.39
KDM2A-213ENST00000531696 TYMSOSQ8TAI1 123 aa6.37□□□□□ -1.39
KDM2A-213ENST00000531696 H0YAA0 97 aa6.36□□□□□ -1.39
KDM2A-213ENST00000531696 TGP01266 2768 aa6.36□□□□□ -1.39
KDM2A-213ENST00000531696 KRTAP10-11P60412 298 aa6.35□□□□□ -1.39
KDM2A-213ENST00000531696 TENM4Q6N022 2769 aa6.35□□□□□ -1.39
KDM2A-213ENST00000531696 NBDYA0A0U1RRE5 68 aa6.34□□□□□ -1.39
KDM2A-213ENST00000531696 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
KDM2A-213ENST00000531696 SEC61BP60468 96 aaKnown RBP6.26□□□□□ -1.41
KDM2A-213ENST00000531696 PKD1L1Q8TDX9 2849 aa6.26□□□□□ -1.41
KDM2A-213ENST00000531696 TENM3Q9P273 2699 aa6.25□□□□□ -1.41
KDM2A-213ENST00000531696 COX6B2Q6YFQ2 88 aa6.25□□□□□ -1.41
KDM2A-213ENST00000531696 CMYA5Q8N3K9 4069 aa6.23□□□□□ -1.41
KDM2A-213ENST00000531696 A0A087WTM6 91 aa6.23□□□□□ -1.41
KDM2A-213ENST00000531696 VWFP04275 2813 aa6.22□□□□□ -1.41
KDM2A-213ENST00000531696 KRTAP1-3Q8IUG1 177 aa6.22□□□□□ -1.41
KDM2A-213ENST00000531696 ANK2Q01484 3957 aa6.18□□□□□ -1.42
KDM2A-213ENST00000531696 KRTAP1-1Q07627 177 aa6.17□□□□□ -1.42
KDM2A-213ENST00000531696 KRTAP24-1Q3LI83 254 aa6.15□□□□□ -1.43
KDM2A-213ENST00000531696 COL7A1Q02388 2944 aa6.14□□□□□ -1.43
KDM2A-213ENST00000531696 KRTAP13-1Q8IUC0 172 aa6.13□□□□□ -1.43
KDM2A-213ENST00000531696 FBN1P35555 2871 aaKnown RBP6.11□□□□□ -1.43
KDM2A-213ENST00000531696 KRTAP13-3Q3SY46 172 aa6.11□□□□□ -1.43
KDM2A-213ENST00000531696 TPRXLQ17RH7 258 aa6.11□□□□□ -1.43
KDM2A-213ENST00000531696 CSMD3Q7Z407 3707 aa6.09□□□□□ -1.43
KDM2A-213ENST00000531696 OTOGQ6ZRI0 2925 aa6.07□□□□□ -1.44
KDM2A-213ENST00000531696 DNHD1Q96M86 4753 aa6.06□□□□□ -1.44
KDM2A-213ENST00000531696 TENM1Q9UKZ4 2725 aa6.04□□□□□ -1.44
KDM2A-213ENST00000531696 S4R3F8 94 aa6.04□□□□□ -1.44
KDM2A-213ENST00000531696 J3QL48 77 aa6.03□□□□□ -1.44
KDM2A-213ENST00000531696 TRRAPQ9Y4A5 3859 aa6.02□□□□□ -1.45
KDM2A-213ENST00000531696 PLAC4Q8WY50 150 aa6□□□□□ -1.45
KDM2A-213ENST00000531696 TENM2Q9NT68 2774 aa5.99□□□□□ -1.45
KDM2A-213ENST00000531696 SMR3BP02814 79 aaPredicted RBP5.99□□□□□ -1.45
KDM2A-213ENST00000531696 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.46
KDM2A-213ENST00000531696 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
KDM2A-213ENST00000531696 KRTAP13-2Q52LG2 175 aa5.95□□□□□ -1.46
KDM2A-213ENST00000531696 ANK3Q12955 4377 aaKnown RBP5.92□□□□□ -1.46
KDM2A-213ENST00000531696 R4GN34 69 aa5.9□□□□□ -1.46
KDM2A-213ENST00000531696 M0QZ58 72 aa5.89□□□□□ -1.47
KDM2A-213ENST00000531696 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
KDM2A-213ENST00000531696 FBN3Q75N90 2809 aa5.88□□□□□ -1.47
KDM2A-213ENST00000531696 DNAH3Q8TD57 4116 aa5.84□□□□□ -1.47
KDM2A-213ENST00000531696 Q6ZRN7 208 aaPredicted RBP5.8□□□□□ -1.48
KDM2A-213ENST00000531696 MEGF8Q7Z7M0 2845 aa5.8□□□□□ -1.48
KDM2A-213ENST00000531696 LYSTQ99698 3801 aa5.79□□□□□ -1.48
KDM2A-213ENST00000531696 KRTAP10-2P60368 255 aa5.79□□□□□ -1.48
KDM2A-213ENST00000531696 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
KDM2A-213ENST00000531696 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
KDM2A-213ENST00000531696 KRTAP10-1P60331 282 aa5.73□□□□□ -1.49
KDM2A-213ENST00000531696 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
KDM2A-213ENST00000531696 DNAH10Q8IVF4 4471 aa5.67□□□□□ -1.5
KDM2A-213ENST00000531696 DNAH7Q8WXX0 4024 aa5.64□□□□□ -1.51
KDM2A-213ENST00000531696 PRKDCP78527 4128 aaKnown RBP5.63□□□□□ -1.51
KDM2A-213ENST00000531696 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
KDM2A-213ENST00000531696 FRAS1Q86XX4 4008 aa5.62□□□□□ -1.51
KDM2A-213ENST00000531696 KRTAP10-6P60371 365 aaPredicted RBP5.61□□□□□ -1.51
KDM2A-213ENST00000531696 KRTAP1-4P0C5Y4 121 aa5.6□□□□□ -1.51
KDM2A-213ENST00000531696 XP32Q5T750 250 aa5.54□□□□□ -1.52
KDM2A-213ENST00000531696 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
KDM2A-213ENST00000531696 RPS29P62273 56 aaKnown RBP5.48□□□□□ -1.53
KDM2A-213ENST00000531696 DNAH9Q9NYC9 4486 aa5.47□□□□□ -1.53
KDM2A-213ENST00000531696 RYR3Q15413 4870 aa5.46□□□□□ -1.53
KDM2A-213ENST00000531696 KMT2CQ8NEZ4 4911 aaKnown RBP5.46□□□□□ -1.54
KDM2A-213ENST00000531696 TNP1P09430 55 aa5.43□□□□□ -1.54
KDM2A-213ENST00000531696 KRTAP3-2Q9BYR7 98 aa5.43□□□□□ -1.54
KDM2A-213ENST00000531696 DNAH1Q9P2D7 4330 aa5.42□□□□□ -1.54
KDM2A-213ENST00000531696 HYDINQ4G0P3 5121 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms